ID AB500949; SV 1; linear; genomic RNA; STD; VRL; 3586 BP. XX AC AB500949; XX DT 14-NOV-2009 (Rel. 102, Created) DT 21-APR-2010 (Rel. 104, Last updated, Version 2) XX DE Barley yellow mosaic virus genomic RNA, segment 2, complete sequence, DE strain: K05. XX KW . XX OS Barley yellow mosaic virus OC Viruses; Riboviria; Potyviridae; Bymovirus. XX RN [1] RP 1-3586 RA You Y., Shirako Y.; RT ; RL Submitted (12-MAY-2009) to the INSDC. RL Contact:Yukio Shirako University of Tokyo, Asian Natural Environmental RL Science Center; 1-1-1 Yayoi, Bunkyo-ku, Tokyo 113-8657, Japan XX RN [2] RX DOI; 10.1111/j.1364-3703.2010.00613.x. RX PUBMED; 20447286. RA You Y., Shirako Y.; RT "Bymovirus reverse genetics: requirements for RNA2-encoded proteins in RT systemic infection"; RL Mol. Plant Pathol. 11(3):383-394(2010). XX DR MD5; 638c5307c65e70a4515eeca8691420a7. XX FH Key Location/Qualifiers FH FT source 1..3586 FT /organism="Barley yellow mosaic virus" FT /segment="2" FT /host="Hordeum vulgare" FT /strain="K05" FT /mol_type="genomic RNA" FT /country="Japan:Kurashiki" FT /collection_date="2005" FT /db_xref="taxon:12465" FT CDS 155..2827 FT /codon_start=1 FT /transl_table=1 FT /product="98-kDa polyprotein" FT /db_xref="GOA:D0VYB9" FT /db_xref="InterPro:IPR001456" FT /db_xref="InterPro:IPR031159" FT /db_xref="InterPro:IPR036417" FT /db_xref="InterPro:IPR042308" FT /db_xref="UniProtKB/TrEMBL:D0VYB9" FT /protein_id="BAI49486.1" FT /translation="MSASSSRLLFDCGSLDWPNKSLFGDPTTRDVMHEHISSTWNAVIR FT RHMLAPSADAETILGRDGLPSAQFDAYGAMLPSFVQALNAPTTRLRISAPLSTAESILC FT ADASHAPWLYMANSVCAYEATHLQPVQTFIAFNFAHGYCYLSLFIPLSFRITFENARSF FT SRFLEQLPDILGAYPTLAAIYKTMLYAIRLFPEVLQAPIPIIAKRPGVLQFHVSDARGL FT PPSWFPMKCGSVASFVALITNNLNSDLLNGIVGSNGDGEHYTNWNSGHDHWIVNRFITV FT KDLHSSLKSALEVDLDTEGGRNAVLDLLLDLGVTNLVRREKRFPAYFQGAESVYLLLSC FT ERVGNELVAVQDALQEPMTHYSGLDLRALIINLGGLPSRHSDICYTRNIFENDNHLVWN FT FEFYRIASITKNAQIDRDVISSSMANLFSDFVSESTNGQYRVKEPRPVAQHRVEHNEPV FT ASGAPSAWWQVLIGITTAILGAIIFFLWRCFLRAKRVKFQAKDSFPWFTTSGDDDSPPP FT PGDSPSRPPGRSPDRVLPRTVVRDLSFNDDDDLHSVDLNEAGSRFGEVVSLIARGNLRE FT LAGAIPESLSNLTLLQTSASGSGFYTMVALYLATLGDAITAFHEHNDASPATIQSLRTL FT ELQLEARGLRFNEAGTPANLIQRGVNSSVGRALVRLTQSALLATGENFRTRMATTLERI FT AAERLNTLTAYDQRVIEMTTELLAAIKTALEVERSELTPHLANAEALLQVYNNLFSTDY FT ASASLLALRREMILRSAEGRVGEQPTSASDAANEELVQRSMTKLDKEIELFQAQIDSQR FT RAVTITEASNLRENILQPINTVANIAMAGAFLRGGARHRMPGMPDVATPMPNPFRAFSG FT RGHSLTTTRSGGLFRRPRV" XX SQ Sequence 3586 BP; 930 A; 922 C; 770 G; 964 T; 0 other; aaaataaaac aaccctaaac caaaacaagc aaaacaaaac aaacacaaac atcacacgct 60 ccccaagctc gcaacacttg tagagtgatt tctgtcatcc tactgtttgc aagctttcca 120 gcaaatcaat ccgcttgctt tcaaaccctc catcatgtct gcttctagct cacggctact 180 cttcgactgt ggcagtcttg attggccaaa taagagctta tttggcgatc ccacaacgcg 240 agatgtcatg cacgaacaca tttccagcac atggaatgct gtcattagaa ggcacatgtt 300 ggcgcccagt gccgacgccg aaactatatt gggccgtgat ggtttaccat ctgctcaatt 360 tgacgcttat ggagccatgc tacctagctt cgttcaagct ctaaatgcac ccacaacgcg 420 tctcagaatc agcgcaccgc tgtccaccgc tgagtccatc ttatgcgctg atgcatccca 480 cgctccttgg ttgtacatgg caaacagtgt gtgcgcatac gaagcaactc atctgcagcc 540 tgtacaaact tttatcgctt tcaactttgc acatggctat tgttacctca gtctcttcat 600 accgctaagc tttcgcatta ccttcgagaa tgctcgaagt ttcagtcggt tcctcgaaca 660 gcttcctgac attttaggtg catatccaac attagccgca atatataaaa caatgctata 720 cgctattagg cttttcccag aggtgctaca agctccaatt cccatcatcg caaaaaggcc 780 tggcgtgctc caatttcacg ttagcgatgc cagagggcta cccccctcat ggtttcccat 840 gaagtgtggc agcgtagcat ctttcgtagc actcattacc aacaacctga acagcgattt 900 gcttaatgga attgttggtt caaatggtga tggcgagcac tacacaaatt ggaactctgg 960 acatgaccac tggattgtga atcgattcat aacagttaaa gatttgcaca gcagcttaaa 1020 gtcagctctg gaggttgact tggacacaga gggtgggcga aatgccgttc tcgatctgct 1080 tctagatctc ggggtcacca atcttgttcg aagagagaaa cgcttcccag catacttcca 1140 aggagctgaa agcgtatatc tacttctatc atgcgagaga gttgggaacg agttagtagc 1200 cgtgcaagat gctctgcaag aaccaatgac tcattattct ggtttagatt tgagagctct 1260 catcatcaat cttggcggtt taccaagcag acactctgat atttgctaca cacgcaacat 1320 ttttgagaac gataatcatc tggtttggaa ctttgagttc tacaggatag cctcaatcac 1380 gaagaatgca caaattgaca gagatgttat cagctcatcc atggcgaatt tgtttagcga 1440 ctttgtttca gagtcgacaa atggtcagta cagagtcaaa gaaccaagac ctgttgctca 1500 gcacagggtt gagcataatg aaccagttgc tagtggtgcc ccatctgctt ggtggcaagt 1560 tcttattggc atcaccaccg cgattcttgg cgcaataata ttctttctct ggaggtgttt 1620 cttacgtgct aagcgtgtga aattccaggc aaaggactcc ttcccatggt ttaccacatc 1680 tggtgatgat gactcaccgc ctccccctgg tgactcccct tcgcgccctc ctggacgtag 1740 cccagatcga gttcttccgc gcacagttgt tcgagatctt agcttcaatg acgatgatga 1800 cttacatagc gttgatctca acgaagctgg atcgcgtttt ggggaggttg tctctttaat 1860 tgcaagggga aatcttcgcg agttagctgg tgcaattccc gaatctctca gcaacctaac 1920 cctccttcag acgagtgcga gtgggtcagg tttttacact atggtggctt tgtaccttgc 1980 cactttaggg gatgctatca ctgcctttca tgagcacaat gatgcctcac ctgccacaat 2040 tcaatcactg cgaacgctcg aacttcagct tgaagcccgt ggtctgcgtt tcaatgaagc 2100 tggtacaccc gcaaatctca tccagagggg cgttaattct tctgttggta gagcacttgt 2160 gcgactcaca cagagcgctc ttctagctac tggtgaaaac tttcggacac gcatggcaac 2220 cacacttgag agaattgctg ctgagcgtct taacacatta accgcttatg atcagcgagt 2280 tattgaaatg acaactgagc tcctagcagc gattaaaacc gctcttgagg ttgagcgcag 2340 tgaactcact ccacatctcg caaacgccga ggctttgctt caagtttaca ataatctctt 2400 cagcaccgat tacgcttcag catcgctgct tgctcttagg cgcgagatga ttcttaggag 2460 tgctgagggg cgtgttggag aacagcccac aagtgcttct gatgctgcta acgaggagtt 2520 ggttcaacgt tctatgacaa aattggataa ggaaattgag ttgttccaag cacaaattga 2580 tagccagcgc cgcgccgtca ccataactga agcatccaat ctcagagaaa atatattgca 2640 accaatcaac actgtcgcaa atattgctat ggctggagct tttctgcgtg ggggcgcgcg 2700 tcatcgcatg ccaggaatgc cagacgtagc cacgcccatg cccaaccctt ttcgagcttt 2760 ctcagggagg ggacattcac tcacgacaac tcgaagtggc ggtctcttcc ggcgccctcg 2820 agtctagaat tctcatcaca gcagcattta ctttcaaccg ccttagcata gtgtagatca 2880 acatcatcca tttctccatc ctttcgccat ctgcacacca ttgccattaa tatggtagag 2940 ttagcgattc atcccttgct acgctcaaaa gtctccatct ttagaccacc tgcaaacaca 3000 caaaatacca aaaataccat ttatcattct gtttcaaacg ccagcatttt aaattacccg 3060 caattgtatt atcgtttcgc catcaaagta tggttcgttt catcaacatc tgctcgcacg 3120 attgggtgta tggggccagt gttgtttcgg gtatggaatt caaatggtaa gaaattgatt 3180 cttctcacca tgagtttttc aggggataag ttcggtgcta cagctagcgg ctgtatcctt 3240 aacgatgccc cacaccacga aacaccattg attcttcgga attagccttt caaatatccc 3300 aactgcaatg agcacgatag cattgcatct ccactcaagg tccggttaga gtccctggca 3360 ggtgtgggct acaggagcat gtgaatgctt ctctgtcacc atctgtcgtc tgcggcctct 3420 atctagcact acgagtggag ccacgtcttt aaatccccag catgttaact ttatgttctg 3480 catagaaaac gtcacatctg tgatacaaaa acatgcaaca cgtgcccatc atcggtcgcg 3540 ggttgtagtc tgacgaacaa caacttttgt acacaggaaa tgtgac 3586 //