ID AB500948; SV 1; linear; genomic RNA; STD; VRL; 7642 BP. XX AC AB500948; XX DT 14-NOV-2009 (Rel. 102, Created) DT 21-APR-2010 (Rel. 104, Last updated, Version 2) XX DE Barley yellow mosaic virus genomic RNA, segment 1, complete sequence, DE strain: K05. XX KW . XX OS Barley yellow mosaic virus OC Viruses; Riboviria; Potyviridae; Bymovirus. XX RN [1] RP 1-7642 RA You Y., Shirako Y.; RT ; RL Submitted (12-MAY-2009) to the INSDC. RL Contact:Yukio Shirako University of Tokyo, Asian Natural Environmental RL Science Center; 1-1-1 Yayoi, Bunkyo-ku, Tokyo 113-8657, Japan XX RN [2] RX DOI; 10.1111/j.1364-3703.2010.00613.x. RX PUBMED; 20447286. RA You Y., Shirako Y.; RT "Bymovirus reverse genetics: requirements for RNA2-encoded proteins in RT systemic infection"; RL Mol. Plant Pathol. 11(3):383-394(2010). XX DR MD5; a4d6d8d7b6c6920c0f974bd23adaf5d5. XX FH Key Location/Qualifiers FH FT source 1..7642 FT /organism="Barley yellow mosaic virus" FT /segment="1" FT /host="Hordeum vulgare" FT /strain="K05" FT /mol_type="genomic RNA" FT /country="Japan:Kurashiki" FT /collection_date="2005" FT /db_xref="taxon:12465" FT CDS 172..7410 FT /codon_start=1 FT /transl_table=1 FT /product="271-kDa polyprotein" FT /db_xref="GOA:D0VYB8" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001592" FT /db_xref="InterPro:IPR001650" FT /db_xref="InterPro:IPR001730" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="InterPro:IPR013648" FT /db_xref="InterPro:IPR014001" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:D0VYB8" FT /protein_id="BAI49485.1" FT /translation="MEQTLAQAVSRKSKTDTPMAEERKHFSPMNFSANFVAPELFYSAN FT VRKIKNIFKERSTTRFLDAISSDFELVAFLTLSPAHLMQLETVLRQEMRSCAVPIVTSD FT ASFETVAVIKTALDGMRFHFGYTTLEKGWMSMMRHAESCLQESSSSAVNDLQTQIKRVG FT SLLLSGKNRVEGCELSVLNLTARRFRIEYGLNGTYFGEHVAMLRDLKRYIYGTVPKEFL FT WAKTKKHSRFTIPAWIKRTPIDCFLFCLRVIPILHRCGVAVSLIYWSCAAALNFPAFMS FT FLFKRQFSKYLAHSFAKHSIYFMFLTIVAILWSFRTLTPQKPKIVLQARSTAEKEKKLM FT MILASVVGVTYLFDYDIAEALGNCLHKISRLSSYLLDDHQGIASRMFGASYGLQAGDSA FT EDAVTTIISDLLSVTFKIVDEDASQGTVEDASETTFHSWVGVNTLAGRNMSRPLQYSVN FT KTYALTPQNVQLQARAMADANNCWSMVVGHTGSGKSTYLPVQYSNYLSTKSDRRQQILI FT CEPTQAATENVCAGVAANLGRAVYGRHEGWSRMGDHCIQVMTYGSALQCHAMDPSFIST FT FDAIFLDEAHDVKEHSLVFESICDTFKSVRKFYVSATPRDGSVCPEAARKYPLHVETSV FT CDSYRKFIAAQGGGDLLDISKHDTALVFLAGRPECIKAANAWNASVTGEKRAFSLSSDN FT FATDFSMLTERLKTHKTIIFTTNIIETGVTLSVDCVVDFGHTMRPCLDLNQKSLRLDRR FT RVTRNERQQRIGRAGRLKDGYAIVCGDVDRAVNVISPDVLYGAALLSFKHNVPFYMNET FT FESSWLEGVTKAQADTMTIFKLPIFLTRDLINADGSVAKEFLDVLKKHQFTTSDIKQAP FT SVTAKHIFPTWPSYFSLHQALHYGDDKDEIPHELRYARVPFSVTTLSKFDWPALALACE FT KHRASMSNVFAGVEEPARVVTLQTNPANIQASITHLTHMSKNYKTLIENNQHVRQSMMT FT NVMFKWFSSTRITKDLDRNLRRCTDNLAVVEATLSSLRQILAGNTQVHATPHMQSTLED FT IIGLQASNTLTEESLASALGIFVPKSNLFLLLATKGFKLVYVICILLIVNLVYIGLRKW FT REHLKQKGSDEILTNTMPVSEGGEILAEVMKMEPKMRKNIKRDMDEAVESKLCGFTFVF FT PDDDKIGLEGKGNKYRPREDARLMYSTREDATFDAWNEKAKERRKKVTDKSEPELRRAY FT EKRPYFNFYDLQTDSNILEAIFYTTEGDEFFRTADPNKDMNLVADKLRSFLDTKLVVGH FT HQRQMLEETAKVIIKDTKGTAHHMDISQHDPDYLKQNGSGKIGYPEHRGQFRQEGSAKT FT TDYDLGAEFGTDTDDITLEASTGILLSQVGVDVATRVGRICIGTFNMNCYFYSDWILVP FT GHLQDRSGNVTIQFPDQTVQTTTDALNANGVKRFYGLDVIAIRRPAILRPRTKLVKAFA FT IEEPVIAQMVFVDAQGVRKFTQSDWARKEENSGRWSHKISTVLGMCGCPVLDVGKNRLI FT GIHVATNYTKKRNEFQPFTQEVVDFINGPGTKIPYCPWVFDRPACGYASHTALFEKPTT FT LTDIIHMQASDGLHNINNAIEGFGSSLRGQHVSPPTESTRQRFDKLFGSGSFELIGQMN FT KGLIDKHVIVGENDDVYDFMREHPTFTWLKDFMNEYAPSVLSYSAYYKDLCKYNRAKHV FT LTYNPEELHYATKGLIKMLEDAGLTQGSVRTPQQVISDIQWNTSAGPSYQGKKRDLCAH FT LSDDEVLHLAEVCRQQFLEGKSTGVWNGSLKAELRTIEKVEAEKTRVFTASPITSLFAM FT KFYVDDFNKKFYATNLKAPHTVGINKFGRGWEKLHDKLNRPGWLHGSGDGSRFDSSIDP FT FFFDVVKTIRKHFLPSEHHKAIDLIYDEILNTTICLANGMVIKKNVGNNSGQPSTVVDN FT TLVLMTAFLYAYIHKTGDRELALLNERFIFVCNGDDNKFAISPQFDEEFGHDFSPELVE FT LGLTYEFDDITSDICENPYMSLTMVKTPFGVGFSLPVERIIAIMQWSKKGGVLHSYLAG FT ISAIYESFNTPKLFKSIYAYLLWLTEEHEAEILAAMTQSSTALPIPSMLDVYRLHYGDD FT EIWLQAADPLTDAQKEDARIAAADRARFELADADRRRKVEADRVEAARVKKAADAALKP FT VNLTATRMPTEDDGKLKTPSGARIPSSAADGNWSVPATKQVNAGLTLKIPLNKLKSVPK FT SVMEHNNSVALESELKAWTDAVRTSLGITTDEAWIDALIPFIGWCCNNGTSDKHAENQV FT MQIDSGKGAVTEMSLSPFIVHARMNGGLRRIMRNYSDETVLLITNNKLVAHWSMKHGAS FT ANAKYAFDFFVPRSWMNPQDIEVSKQARLAALGTGTYNTMLTSDTTNLRKTTNHRVLDS FT DGHPELT" XX SQ Sequence 7642 BP; 2160 A; 1797 C; 1702 G; 1983 T; 0 other; aaaataaaac aaccctaaac caaaacaagc aaaacgaaac aaacacaaac aacacacgct 60 ccccaagctc accatacttg tagagtgatc tttgtcatcc tactccttgt gagcttttcc 120 gcaaatcaac ccgcttgttt ttgcgccccc ttcaccttca ctctcgctcc tatggagcaa 180 accctagctc aagctgtgtc acggaaaagc aaaacagaca cacctatggc agaagagcgg 240 aaacatttca gccccatgaa tttttccgca aactttgttg cccctgagct cttttatagt 300 gctaatgtga ggaagatcaa aaatatcttc aaagagcgca gcacaactcg gtttctggac 360 gcgatttcaa gtgactttga gcttgtcgct tttctcacct tgagtcctgc tcatttgatg 420 caactagaaa cagttttgcg ccaagagatg cgttcatgcg ctgtgccaat tgtcacctct 480 gatgctagct ttgaaacagt tgctgtcatc aaaaccgctc tggatggcat gagattccac 540 tttggataca ctactcttga aaaggggtgg atgtctatga tgcgccatgc ggagagttgc 600 ctgcaagaga gctcttcttc ggctgtgaat gacctgcaga cgcagattaa acgtgttgga 660 tcgctactcc tgagtggaaa aaatcgcgta gaaggctgcg aactatctgt cttgaacctt 720 accgcgcgac gtttcaggat cgaatatggg ctaaatggta catactttgg cgaacatgtt 780 gctatgctac gcgacttaaa acgttatatc tatggtaccg taccaaaaga gtttttgtgg 840 gcgaaaacca aaaagcactc acggttcaca atccccgcgt ggatcaagcg tacgcccatc 900 gattgtttct tgttctgtct tcgcgttatc cctatcttac ataggtgtgg tgttgccgtg 960 tcacttattt actggtcgtg tgctgccgct ttaaattttc ctgcttttat gtctttctta 1020 tttaagcgtc agttctctaa gtatttagct cactcctttg ctaaacactc catctacttt 1080 atgtttttaa ctatagttgc tattttatgg tcttttcgca ctttaactcc tcaaaaacca 1140 aaaatagtgc ttcaggctag aagcacagca gaaaaagaga agaagcttat gatgatccta 1200 gctagtgtcg ttggggtcac ttacctcttc gactatgaca tagcagaagc tcttgggaat 1260 tgtctacata aaataagtcg tctgtcctca tatcttctcg acgaccatca aggcattgca 1320 tcacgaatgt ttggagcaag ctacgggctt caagctggcg acagtgctga ggatgcagtc 1380 acaacgataa tcagcgactt actgtctgtt acttttaaaa ttgtggatga agacgcatca 1440 cagggcaccg tggaggacgc atctgagaca accttccaca gttgggttgg tgttaacaca 1500 cttgcaggtc gcaatatgtc aagaccactt cagtatagcg tcaataaaac gtatgcactc 1560 acacctcaaa atgttcagct ccaagcgcga gctatggcag acgctaacaa ctgctggtca 1620 atggttgttg gtcatacagg atctggaaag tccacatact tacctgtgca gtactccaac 1680 tacttatcca ctaagagtga caggcgacag caaattctta tctgcgagcc aactcaggct 1740 gccactgaga atgtttgcgc tggcgtcgct gccaatctcg gcagagctgt ttatgggcgc 1800 catgagggtt ggtccagaat gggggatcat tgcatccaag ttatgacgta tgggtctgcg 1860 ctccagtgtc acgctatgga ccctagcttc atatcaactt tcgacgcaat tttccttgat 1920 gaggcacacg acgttaaaga gcactctcta gtctttgaga gcatttgtga cacattcaaa 1980 tccgttcgaa agttctatgt ttcagcaact cccagagatg gcagtgtttg tcctgaagca 2040 gctaggaaat atcctttaca tgttgaaact agcgtttgcg attcgtatcg gaagttcatt 2100 gcagctcaag gcggaggaga tttgttggac atctcaaaac atgatacagc tttagttttt 2160 ctagcgggac ggcccgagtg tattaaagct gctaatgctt ggaatgctag tgtcaccggt 2220 gagaagcgcg ccttttcctt gtcgagcgac aactttgcta ctgatttctc aatgctaact 2280 gagaggctca aaacacacaa aaccatcatc ttcaccacga acataattga gacaggtgtt 2340 actctcagcg ttgactgtgt tgtggacttc ggccatacaa tgcgcccatg tttagatctc 2400 aatcaaaaat cattgcgtct tgatcgacgc agagtgacgc gaaacgaaag acagcagaga 2460 attgggcgag cgggtcggct caaagacgga tacgccatag tgtgtggaga tgttgataga 2520 gctgtaaacg tcatctctcc tgatgttctt tatggtgctg ctctcctgag ttttaaacac 2580 aatgtgcctt tctacatgaa cgaaacattt gagagttcct ggttggaggg tgttacaaag 2640 gcacaagcag acacaatgac aatcttcaag cttcctatat ttctaacacg agatctcatc 2700 aatgcagatg gctcagttgc taaggagttt ctcgatgtcc taaagaagca ccaattcaca 2760 acaagcgaca taaagcaagc accaagtgtt acagccaaac atatcttccc aacttggcct 2820 tcatacttct ctctccacca agcacttcat tatggtgatg acaaggatga gataccacac 2880 gaattgcgat acgcgcgcgt tcccttctcc gtcacaactt tgagcaaatt cgattggcca 2940 gccttagctc ttgcatgtga gaaacataga gcttccatgt caaatgtgtt tgctggtgtc 3000 gaggaacctg cacgcgttgt cactctacaa acaaatcctg cgaacataca agcgagcatc 3060 acacatttaa cgcacatgag taagaactac aaaactctta ttgaaaataa tcagcacgtg 3120 cgccaatcca tgatgacgaa tgttatgttt aagtggttct cttccactcg catcactaaa 3180 gatcttgata gaaacttgcg aagatgcacg gataaccttg cagttgtcga ggccacgctc 3240 agctcactta gacaaatttt agctggcaac acgcaggttc atgcaacgcc acacatgcag 3300 agcactcttg aggatattat tgggctccaa gctagcaaca cactcacgga agagagctta 3360 gcgagcgcac ttggcatctt tgttccgaag agcaacctct ttctgctgct agctaccaaa 3420 ggttttaaac ttgtgtacgt tatctgcatc ttacttattg tgaaccttgt ttatattggt 3480 cttcgcaagt ggcgcgagca tcttaagcag aaaggaagcg atgaaatcct aactaacaca 3540 atgccagtta gcgaaggggg tgaaattctc gctgaggtca tgaaaatgga gcctaaaatg 3600 agaaagaaca tcaagaggga tatggatgaa gccgttgaga gcaaactatg tggtttcacc 3660 tttgtttttc cagatgatga caaaattggt cttgaaggta agggaaacaa gtaccgccct 3720 cgcgaagatg ctcgtctcat gtactccact agggaagacg ccacctttga cgcttggaat 3780 gagaaagcaa aggaaaggcg taagaaggtg accgacaaat ccgagccaga gcttcggaga 3840 gcctatgaaa agagaccata cttcaatttc tacgaccttc aaacagatag caacattctg 3900 gaagctattt tctacaccac tgaaggcgat gagtttttcc gaacagcaga tcccaataag 3960 gacatgaact tggttgctga caaactacgc tcttttctcg acacaaagct tgttgttgga 4020 caccaccagc ggcagatgct agaagaaaca gccaaggtta ttatcaaaga tacgaaggga 4080 actgcgcacc acatggacat ttcacagcat gatccagact atctaaagca gaatgggtcc 4140 ggcaaaattg gatatccaga acaccggggg cagtttcgac aggaaggatc tgccaaaaca 4200 acggattacg atcttggagc tgagtttggc accgacaccg atgacatcac gctcgaagcc 4260 tctactggga tattattgtc acaagttggg gtcgacgtcg caacccgagt tggaagaatt 4320 tgcattggta ctttcaacat gaactgttac ttctacagcg actggattct ggttccggga 4380 cacctgcaag acagatccgg caacgtgaca attcaatttc ctgaccaaac agtgcaaacc 4440 acaactgatg cactcaacgc aaatggtgtg aaacgattct atggattaga tgtgatagca 4500 attcggcgcc ctgctatctt gagacctcgc accaagttgg tcaaagcttt tgctattgag 4560 gaaccagtta tcgcacaaat ggtctttgtt gacgcacagg gagttcgtaa gtttactcaa 4620 tctgattggg ccagaaagga ggagaattcc ggacgttggt cgcacaagat ttccactgtt 4680 cttggcatgt gtggatgccc agttctggac gttggaaaga acagactgat aggaatccat 4740 gttgccacaa actacacaaa gaagcgcaac gagttccaac ccttcactca ggaggtcgtt 4800 gattttataa atggacctgg aacaaaaatc ccctactgcc catgggtatt cgatagaccg 4860 gcttgtgggt atgcatccca cacagctttg ttcgagaaac caaccacact aactgacatc 4920 attcacatgc aagcttctga tggtttgcac aacatcaaca atgccattga gggtttcggg 4980 agttcactga ggggtcagca cgtatcacca cctactgaat ccaccaggca acgtttcgat 5040 aagctgtttg gtagtggcag ctttgagctc attgggcaaa tgaacaaagg cttaatcgac 5100 aaacacgtaa ttgttgggga aaatgatgat gtttatgact tcatgcgcga gcacccaaca 5160 tttacttggt tgaaagattt catgaatgag tatgcgccca gtgttttgtc ttactctgct 5220 tactacaaag acctttgcaa gtataatcgt gcaaaacacg tgctcactta caacccagaa 5280 gagctccatt atgcaacgaa aggactgatc aagatgttgg aagacgctgg cttgacacaa 5340 ggcagtgtga ggacacccca acaagtcatt tcagacattc aatggaacac ttccgctgga 5400 cctagctatc aagggaagaa acgcgacctc tgtgcccatt tgagtgatga tgaggtgctg 5460 catcttgctg aggtgtgtcg ccaacaattt ctcgaaggca agtcaactgg agtgtggaat 5520 ggttctttga aagctgagtt gagaaccatt gagaaagttg aggcggagaa aacgcgtgtt 5580 ttcacagcct ctcccataac aagcttgttt gccatgaaat tctacgttga cgattttaac 5640 aagaagttct acgctaccaa tctgaaagcc ccccatactg ttggcatcaa taagttcggt 5700 aggggatggg aaaaattgca tgataagctt aatcgccctg gatggttgca cggcagtgga 5760 gatggttcta ggttcgatag ctctatcgat cctttcttct tcgacgttgt gaaaactatt 5820 cgcaagcact ttctcccttc tgagcatcat aaagccattg atctcatata cgatgagatt 5880 ctcaacacaa ccatctgcct ggctaatggg atggtcatca agaagaatgt tgggaacaac 5940 agcgggcagc ctagcactgt tgtcgataac acacttgtgc tcatgactgc atttctctac 6000 gcatacatcc acaaaacagg agaccgtgaa ttggccttgc taaacgagcg tttcatcttt 6060 gtttgcaatg gcgatgacaa caagtttgcc atatctccgc agtttgacga agagtttggg 6120 catgatttct ccccagaact tgttgaactt gggctcacgt acgaatttga tgacatcact 6180 agcgacattt gcgagaatcc ttatatgtcc ctcaccatgg tgaaaacccc ttttggcgtt 6240 ggtttttctc ttcccgtgga aagaatcata gctatcatgc aatggtccaa gaaaggggga 6300 gttctgcact catacttggc tggcatttcc gcaatctacg aatccttcaa cacaccaaaa 6360 cttttcaaat caatctatgc gtatcttctt tggctcactg aggagcacga ggcagaaatt 6420 ctcgcagcca tgactcaatc ctcaactgct cttcccatac catcaatgct cgatgtttat 6480 cggttgcatt atggtgatga tgaaatttgg ctgcaagctg ctgatcctct cactgatgca 6540 caaaaagaag atgcacgcat tgctgcagct gatagagcac gcttcgaact agccgatgct 6600 gatcgtagac gtaaagttga ggccgaccgt gtggaagcgg caagagtcaa aaaggcagct 6660 gatgctgcac taaaaccagt taacctcaca gcaacacgca tgcccacaga agatgatggc 6720 aaacttaaaa caccatctgg cgctagaata ccatcatcag ctgcagatgg taactggagc 6780 gtgccagcaa cgaagcaagt taacgctggt ttgacactta aaattcccct gaataagctc 6840 aaaagtgttc ctaagtctgt tatggagcat aacaactcag tcgcactcga atctgagcta 6900 aaagcctgga ctgatgctgt gcgcacaagt ttaggtatca caactgatga ggcatggatc 6960 gatgccctca ttcccttcat cggatggtgc tgcaacaatg gcacctcaga caagcatgct 7020 gagaatcaag taatgcaaat tgacagcgga aagggagctg tcacagagat gagtctgtcc 7080 ccatttattg ttcatgctcg aatgaatggt ggactccgaa ggatcatgcg caactacagt 7140 gatgaaaccg tcttactcat cacaaacaac aaactagttg cacattggtc aatgaagcat 7200 ggcgcttctg caaacgcaaa atacgctttc gatttcttcg tcccacgatc atggatgaac 7260 ccacaggata tcgaagtgtc aaagcaagcg cgcttagcag cacttggaac tggaacgtat 7320 aacaccatgt taacttccga cactaccaat ctgcgtaaga caaccaacca cagggttctg 7380 gactcagatg gacacccaga actaacctaa accatcaccc cgtgccttat acatcaccca 7440 cccccactca taattcagtc tttaaattat gttcgtgacg tctttgtatc aggctcggaa 7500 cggttctatg atccatatgc ctttggcagt tacaatgtca gcattctcat tgaggagtat 7560 gacagcgttt gatcagccgt tttcaatcat ccgtcgttgg atggtggtgc acttagtgca 7620 cttacgagta ccagaaggta at 7642 //