ID AB465582; SV 1; linear; genomic RNA; STD; VRL; 5344 BP. XX AC AB465582; XX DT 14-APR-2009 (Rel. 100, Created) DT 14-APR-2009 (Rel. 100, Last updated, Version 1) XX DE Citrus mosaic sadwavirus strain ND-1 genomic RNA, segment RNA 2, complete DE sequence. XX KW . XX OS Citrus mosaic sadwavirus strain ND-1 OC Viruses; Riboviria; Picornavirales; Secoviridae; Sadwavirus. XX RN [1] RP 1-5344 RA Iwanami T.; RT ; RL Submitted (13-OCT-2008) to the INSDC. RL Contact:Toru Iwanami National Institute of Fruit Tree Science, Citrus RL Greening Research Program; Fujimoto 2-1, Tsukuba, Ibaraki 305-8605, Japan XX RN [2] RA Iwanami T.; RT "Properties and control of Satsuma Dwarf Virus"; RL Unpublished. XX DR MD5; 0aa364983be0205887765d62ce1927be. XX FH Key Location/Qualifiers FH FT source 1..5344 FT /organism="Citrus mosaic sadwavirus strain ND-1" FT /segment="RNA 2" FT /isolate="ND-1" FT /mol_type="genomic RNA" FT /country="Japan:Yamaguchi" FT /note="synonym: Natsudaidai dwarf virus" FT /db_xref="taxon:104661" FT CDS 332..5047 FT /codon_start=1 FT /transl_table=1 FT /product="polyprotein" FT /note="This polyprotein contains movement protein and coat FT proteins." FT /db_xref="GOA:C0STS0" FT /db_xref="InterPro:IPR005306" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:C0STS0" FT /protein_id="BAH56590.1" FT /translation="MEIYGFSPLSFQDTESWKNSAFAACRGRKTSLIEEVCADGSTVTR FT EVPVGLILKGVMAQYRSLLWTQFVADSATTTKDRESFDFWLFCRRAEAAQERAYLARKS FT KRAAKAAALDAEGIIDRSYKGRTYKVSTRGLTWKSVRAAQKAARKAAKYFGFSVSENPF FT SCLPSEGRSVAAGETPASLSVVLPQIDWAARKAASRKVPTVGTEDAPFLGLLPESPRLR FT DEGLLSLLRAKIATLVASRDRQVPVPRRVVKTQKKNSQCEFFTEEVRTTKCVINGKMGI FT PRNPIIQRLLPTRLIQRKRVVAKFEPQIVSSSRHKFDMSHIYDERRWVIYPSIIKIELK FT DAYQTAQNLGILSDSASALERVRALSSHHLDLEREVRALEQEHYPAPRKTVAARIFSFF FT MEEYALAHEEAKERIRRQKEDKRREHLSFLRHLRRQAFELLAAERAAYLKKISEAREIA FT IALKERAEKGPPPQLLYIPEWHVVQHAKAHMEGTSYDRTLREHMCHRYDQKLAAFQNGS FT LSESSKFAAACGAHFERIFGYAVHRSARTETVTQVAESSPPPVITAPVGRMVGGNPPTE FT TPGTAAVRAAMQRAVERNRPGPRESSAMPAREPLLSHRGQYYARSLSDRYNNIFSRNNA FT YNLMRETDVPIMEFTFGQQQDIAIPLSSRFGNHPSLHIGELEIAVQSAVLSGVDTAMAI FT MVSDASHDRLEEGFLSLTILRLGAGWMRHTIPIGITVFPTDPLVDRLLRLSVLTGGSPM FT ADGRQVARLHYGLLGQAYTGAGEQRLTQYATRRINVRQTHVTQFLEGNHIHIARSEDRQ FT QPLPHMNLEYRPLSGSTRYVARPGGYQAVESGRQNIDITQNFIAMPTHLTRSATHRDTD FT VSEPANPNIKQGRANQPDNNEVPVSEEEPTGERRLPGGSAVHRGFTEFSERNENKIEHF FT YVPSMHGLSLKEDIHLFTKNLEIPSTADFCKELARYKVMAEAMNYRSASYYSRLLSGVA FT ILRPHFKFVCRLVTPILESIPLMIVWDDLSQLTTKVSRLSSAFEIIDSDHTKAAIYEVR FT PSGPTDLLTPSKSHYGMGGDLVIFSGGYGSSALSSPLRLKIEASLLKDSQVGSGEVGVP FT QGPSSMLSFYYLNEVDIGDINLYSFLGSCKYDSKSVVNSRKYISICPAAGLVHSKGKAA FT YLGLTASLFSMYNFWKGSYILKVDVLSKGSCAGAISIYVPPPGTSADHYSQSQLDTLPR FT YELPWRGTGSARFEVENFSWIGWHLTKPQRFVTNEDWFSLNAGVVVVLNQPPTTRAGGS FT SDIRVIFRIVKFKNLTLKERSTTCDIFTGIKDATYTSPLYDVLDNSISVPASVASDPDI FT ELDATSSIQASNVLPRSFGAYYAYLLGGAVSGKRWHSYVLPITMGHHRSEIGTTKTGYL FT NEKLDDTVRVRYSVRNPLHILCAAGAYYATDLLFTLVIDGDFASERAFAQLGLIQTPLM FT EYYDGYSTDRTLSSEGGHSNQLGVGKSYIQLLVPRRNYRARSITTETATLFFETIGSLS FT IRFTVSDKIKGVHLFVEAAGPIDVDGYGRGFDIGFTEESYVLMPSLRTAAQ" XX SQ Sequence 5344 BP; 1353 A; 1222 C; 1244 G; 1525 T; 0 other; gattgatcaa gcgaactgga agccccagac aaaataattc tctttctctc tctcaatcac 60 actcgagact tagaacttga tatttcttgt tttatgtcta tttcttctgt tcactttatg 120 atgtgtagga tagcgcctac actacgatac tagggatagc gccctagttc cgatactaag 180 gatagcgcct tagccttctt ttcttgtact ttatttcgat tttgtacctt tgcaatttcg 240 attgcaattt taagtaaata attaaaaacc aaaaagattt tcccatttct ttaatttctt 300 ttttgttttt ctttttattt ttcttctttt catggagatc tacggattct cccccctttc 360 cttccaggac accgagtcct ggaagaactc cgcattcgcg gcctgccgag gccgcaagac 420 ctccttaatt gaggaggttt gtgctgatgg gtccacagtg acccgtgagg tcccggtggg 480 cctcattctc aagggcgtta tggcccaata tcggtccctc ctgtggaccc aattcgtggc 540 ggattccgcc accaccacca aagaccggga gtcctttgac ttctggctct tctgccgccg 600 tgctgaggcg gcacaggaac gggcctatct ggcccgaaag tccaagcgag ccgctaaggc 660 cgcagccctc gatgctgagg gcatcattga tcgctcctat aaggggcgaa catacaaggt 720 ctctactcga ggccttacgt ggaaatctgt gcgtgctgca cagaaggctg ctaggaaagc 780 agctaaatat tttgggtttt ctgtttcaga aaatcctttc tcctgcctcc cgtctgaagg 840 gagatcagtt gctgcaggtg aaactcctgc ttctctctct gtggttttac cacagattga 900 ttgggccgcc cgtaaggcgg cctctcgtaa ggtgcctact gtgggcactg aggatgcacc 960 ctttttaggg ttgctcccgg agtctccccg cctccgtgat gaggggttgc tctctttgct 1020 gagagccaag atcgccactc ttgtggcgag cagggaccgt caggtccctg taccaaggag 1080 ggtcgtcaag acccagaaga agaactcaca atgtgagttc tttaccgagg aggtgcgcac 1140 tacaaagtgc gttattaacg gtaaaatggg tattccacgg aatcccataa ttcaacgcct 1200 tctccccacc cgcttaatcc aaaggaagcg agttgtggcc aaatttgagc cacagatagt 1260 gagctcctcg agacataagt ttgatatgtc tcatatttat gatgaacgaa ggtgggttat 1320 ttacccatct attatcaaaa ttgagctcaa ggatgcctac caaactgcac aaaatttggg 1380 catcctttcg gacagtgctt ccgctcttga gcgtgtgcga gccctttcct ctcaccatct 1440 agacctagag agggaggtgc gcgcgctcga acaagagcat tatccggccc caagaaaaac 1500 tgttgctgct agaatttttt ccttctttat ggaggaatat gctctggctc atgaagaggc 1560 caaggaacgc attaggcgac aaaaagaaga taagcggagg gagcatctct cctttctgcg 1620 acacttgaga cgccaagcgt tcgagctttt agctgccgag cgagccgctt atttgaagaa 1680 aatttctgag gctcgtgaaa tagccattgc cctcaaagaa agggctgaaa aaggaccgcc 1740 accacaatta ttatacattc ctgaatggca cgttgttcaa catgcaaaag cgcatatgga 1800 gggtacttca tatgatcgca cgcttagaga gcatatgtgc caccgttatg atcagaagct 1860 agcagcattt cagaatggtt ctctctctga gagttccaaa tttgctgctg cctgtggggc 1920 gcattttgag cggattttcg gatatgctgt gcatagaagt gcacgaaccg aaacggtgac 1980 tcaggttgct gagtcttctc caccaccagt aatcaccgca cctgtagggc gaatggttgg 2040 aggaaatcca cctacagaaa caccaggaac agctgccgtt agagcagcta tgcagcgagc 2100 agttgaacgc aatagacctg gcccccgcga atcttctgca atgccggcca gagaacccct 2160 actttcacat agggggcagt attacgctcg ctcactttca gatagatata acaatatctt 2220 ctctcgcaat aatgcataca atctcatgcg agaaactgat gtgcccatta tggaatttac 2280 tttcgggcaa cagcaggata ttgctatacc tctgtcctcg cgatttggaa accatccgtc 2340 tctccacatt ggtgaattgg aaatcgctgt tcagtcagcg gttctttctg gagtggatac 2400 agcaatggca attatggtct cagatgcttc tcatgataga ctcgaagaag gtttcttgag 2460 tctaaccatt ttgagactag gtgctggatg gatgcgccac acgatcccta ttggaattac 2520 tgtttttcca acggatcctc tagttgatcg tcttttaaga ttatcagtat tgactggagg 2580 ttctccaatg gcagacggta gacaagtggc caggctccat tatggtttgc ttggccaggc 2640 ttatactggc gctggcgagc agaggttaac tcagtatgcc actcgaagga ttaacgtgcg 2700 tcaaacgcac gtaactcaat tccttgaggg caaccatata catattgctc gctctgagga 2760 tagacagcag ccgttacccc atatgaattt ggagtatcgg ccactatctg gaagtactag 2820 gtatgtggca cgacctggtg gatatcaagc tgtggaaagt ggtaggcaga acattgatat 2880 aacgcaaaat ttcatagcaa tgcctacgca cttaacaaga agtgccacgc accgagatac 2940 tgatgtctcg gaacccgcaa atccaaacat taagcaggga cgggcgaatc aacctgataa 3000 taatgaagtc cctgtctcag aagaagaacc aaccggcgaa cggcgcctcc ctggaggttc 3060 agctgttcac agaggattta cggaattctc tgagaggaac gaaaataaaa tagaacattt 3120 ttacgttcct tctatgcatg gactgtcact caaggaagat attcatttat ttaccaagaa 3180 tcttgagata ccttctacag ctgatttctg taaggaattg gccaggtata aggttatggc 3240 agaagccatg aattatagga gcgccagcta ttattctcgt ctactgtccg gggttgcaat 3300 tttgcgacct catttcaaat ttgtgtgtag gctggttact cctattctag aatctatacc 3360 tcttatgata gtctgggacg atttatcaca attaacaaca aaagtctccc gattatcatc 3420 agcctttgaa attattgatt cagatcatac caaggctgca atatatgagg ttcgaccatc 3480 agggcccacg gacttattga ctccctctaa aagccattat ggaatggggg gggatctcgt 3540 tatcttctct ggtggttatg gttcttctgc cctttcctcg cctttgagac ttaagattga 3600 ggcgagtctt ctcaaagact cgcaagtagg ttctggcgag gttggggtgc cccaaggacc 3660 ctcttctatg ttgtcatttt attatcttaa tgaggtggat attggggata taaatttgta 3720 ttcttttcta ggtagttgta aatacgattc taagtcagtt gtaaatagta gaaaatatat 3780 ttctatttgt ccagcagccg gccttgttca tagtaaaggt aaggccgctt atttaggttt 3840 aacagcttcc cttttttcca tgtataattt ttggaaggga agttatattt tgaaagtgga 3900 tgttctttca aaagggagtt gtgctggagc aattagtata tatgtgcctc ctccaggtac 3960 aagtgctgat cactactccc aatcgcagtt ggacaccctc ccacgatatg aattaccttg 4020 gaggggaacg ggatctgcca gatttgaggt tgaaaatttt tcctggattg gttggcattt 4080 gaccaaacct cagcgtttcg taaccaacga agattggttt tcattgaatg ctggggtggt 4140 cgtggtgctc aatcagccac caacaacaag agctggcgga tcaagcgata taagagtgat 4200 ctttcgtatt gtcaaattca aaaacctcac tcttaaagaa cgatccacga cctgtgatat 4260 attcacaggt ataaaggatg caacttatac ttcacctctg tacgatgtac tggataattc 4320 catttcagta ccagcctcag ttgcatccga cccggacatt gagcttgatg ctacctccag 4380 cattcaagcg agcaatgtgc tcccgagatc atttggcgca tactatgcgt atttattggg 4440 tggagcagtg tccggaaaaa ggtggcactc ttatgtgcta cccataacga tgggacatca 4500 taggagtgaa atcggcacga caaagactgg gtatctaaat gagaaacttg atgatacagt 4560 cagagtcagg tactccgtgc gcaacccatt acatatcctg tgcgccgcgg gtgcttatta 4620 tgccaccgac ctccttttca ctctcgtaat tgatggagat tttgcatccg aacgagcctt 4680 cgctcaactt ggactcatcc aaactccttt aatggagtat tacgatgggt attccactga 4740 tcggactctc tcatctgagg gaggacactc taaccagttg ggtgtgggca agtcatatat 4800 ccaattactt gtcccaagga ggaattatag ggctagatcc attaccacgg aaaccgcaac 4860 cttgttcttt gaaacgattg gatccctttc aattcgattc actgtcagtg ataagatcaa 4920 gggagtccat ttatttgtgg aggctgcggg ccctattgat gttgatggtt acgggagagg 4980 gtttgacatc ggattcactg aggaatccta tgttttaatg ccctctctcc gtacagccgc 5040 tcagtagcgg cattaggtaa tgcctgctgg accttaacgc aggattgatc atattgagga 5100 attgggaaag aatttctaga gttctttttc cttctctatg taggtgctgc ccaccggacc 5160 ttgacgtggg ttaatatgta aatactagtg tgtattttct atttatttgt tttgtttgtt 5220 tttcttaaaa taaactggat ttcaaaaagg gtttctcgag ttcttccctt tccgatccag 5280 gaactccgcg tgtttttctt gatttctgtc gcgtgcggtt acgaccagtg aaagtctggt 5340 gacc 5344 //