ID AB465581; SV 1; linear; genomic RNA; STD; VRL; 5266 BP. XX AC AB465581; XX DT 14-APR-2009 (Rel. 100, Created) DT 14-APR-2009 (Rel. 100, Last updated, Version 1) XX DE Citrus mosaic sadwavirus genomic RNA, segment RNA 2, complete sequence. XX KW . XX OS Citrus mosaic sadwavirus OC Viruses; Riboviria; Picornavirales; Secoviridae; Sadwavirus. XX RN [1] RP 1-5266 RA Iwanami T.; RT ; RL Submitted (13-OCT-2008) to the INSDC. RL Contact:Toru Iwanami National Institute of Fruit Tree Science, Citrus RL Greening Research Program; Fujimoto 2-1, Tsukuba, Ibaraki 305-8605, Japan XX RN [2] RA Iwanami T.; RT "Properties and control of Satsuma Dwarf Virus"; RL Unpublished. XX DR MD5; bc9de9a71868af05d74636183d802771. DR EuropePMC; PMC5461049; 28592949. XX FH Key Location/Qualifiers FH FT source 1..5266 FT /organism="Citrus mosaic sadwavirus" FT /segment="RNA 2" FT /isolate="Ci-968" FT /mol_type="genomic RNA" FT /country="Japan:Wakayama" FT /db_xref="taxon:57325" FT CDS 330..5054 FT /codon_start=1 FT /transl_table=1 FT /product="polyprotein" FT /note="This polyprotein contains movement protein and coat FT proteins." FT /db_xref="GOA:C0STR9" FT /db_xref="InterPro:IPR005306" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:C0STR9" FT /protein_id="BAH56589.1" FT /translation="MEIYGFSPLSFQDTESWKNSAFAACRGCKTYPIEEVGADGLVTVR FT EVPVGLVLKGVMAQYRSLMWTQFVADAATITHDRKSFDFWLYCRRAEVADLRAFEARKK FT KRAAKAAALSAEGIIDRSYKGRTYKVSVRGLSWKSVRAAQKAARRAAKNFGFSISENPF FT SHLPSEGSMCAAGEIPASVPSVVLPQIDWAARKAASKKVSSEDTMDAPFLGLLPESPRL FT RNEGLLSSLRAKVATLVASRDRQVPVSKRVVKTQKQNSRSEFCFEEARTTKCVINGKIG FT VPNNPIIQRLLPFHKIQRKRIVAKFKPQTMCSSRHNYDMAHQNDECRWFIYPTTIKIEL FT KDAYRTANNLGIISDDASALERVRAFSSHHLDLEREVLALERECHPAPRKTIIARVLAF FT FMEEYALAYDEAKERLRLQREDKRREHLAFLRHLKRQAFDQLTAERAEYIREISEAREV FT ALALQRKIEEGPPPQLMYIPEWHVVQKAKESIDLDDTLVYEGQRIALRQCYDNRLMHMQ FT SDPDSKKSRKFIAACGRHFERIFGYAVHKGTRTETMTQVAESPPPVMISPLGRTVGGNP FT PTETPGTSAVRAAMQRAVERNRPGPGESSAMPAREPLLSHRGQYYARSLSDRYNNIFSR FT NNAYNLMRETDVPIMEFTFGQQQDIAIPLSSRFGNHPSLHIGELEIAVQSAVLSGVDTA FT MAIMVSDASHDRLEEGFLSLTILRLGAGWMRHTIPIGITVFPTVPLVDRFLRLSVLTGG FT SPMADGRQVARLHYGLLGQAYTGAGEQRLTQYATRRINVRQTHVTQFLEGNHIHIARSV FT DRQQPLPHMILEYRPLSGSTRYVARPGGYQAVEGGRQSVDITQNFIAMPTHLTRSATLR FT DTDVSGPVNPNTGRVSERQIDDNSEIPVADEEPIGGRRLPRGSAFQRGFTEFSERNENK FT IEHLFVPSMHGLSLKEDIHLFTKNLEIPSTADFCKELVRYKVMAEAVNYRSASYYSRLL FT SGVAILRPHFKFTCRLVTPILESIPLLIVWDDLSELTSKVARLSAAFEIIDSDHTRAAV FT YEVRPSGPTDLLTPSKANYGMGGDLVIFSGGYGSSSLSSPLRLKIEASLLKDSQLGSGE FT VGVPQGPSSMLSFHYLNEVDLGDVNLYTFLGSCKYDSKSVVNSRKYISICPAAGLVHNK FT GKAAYLGLTASLFSMYNFWKGSYILKVDVLSKGSCAGAISIYVPPPGTSADHYSQSQLD FT TLPRYELPWRGSGSARFEVENFSWIGWHLTKPQRFVTNEDWFSLNAGVVVVLNQPPTTR FT TGGSSDIRVIFRIVKFKNLTLKERSTTCDIFAGIKDASYTSPLLDVLDNTISAPASVAS FT EPDVGLDASSSVQTNDMLPRSFGAYYAYLLGGAVPGKRWHSYVLPITMGHHRSEIGTTK FT TGYLNEELDDAVRYKVFVAQSIAYFMRRGAFYAADLLFTLVIDGDFTSERAFAQLGLIQ FT TPLMEYYEGYSTDRTLSSEGGCSNQLGVGKSYXQLLVPRRNYRARSVTTYTSVLFFETI FT GSLSIRFTVSDKIKGVHLFVEAVGPIDIDGYGRGLNVGFTDESFVLMPSLRTAA" XX SQ Sequence 5266 BP; 1328 A; 1179 C; 1244 G; 1514 T; 1 other; gattgttaaa gcgaactgga agccccagac aaaatttaat ctttttaact tgcaaactct 60 ctctctctct ctgcatctta aaatctttct tatgtctact tcttctgttc actttatgat 120 gtgtaggata gcgcctacac cacgaaacta gggatagcgc cctagcctcg atactaagga 180 tagcgcctta gttttccttt ttctgtactt aatttcgatt tcgtactctt gtgacttcgg 240 tcatttcttg tttattttaa attttaaaaa ccaaaaagat tttcctattt ctttaatttc 300 ttttttgctt taaatttaaa ttttacttca tggagatcta cggattctcc cccctctcct 360 tccaggacac cgagtcctgg aagaattctg ctttcgcagc ctgccgaggc tgcaagacct 420 accccattga ggaggtaggt gctgacgggc tggtaacagt ccgggaggtc ccggtgggcc 480 tcgtgctgaa gggcgtaatg gcccaatatc ggtccctcat gtggacccaa ttcgtggcgg 540 atgccgccac cattactcat gaccggaagt cttttgactt ctggttatat tgccgccgcg 600 ctgaggtggc cgatcttagg gccttcgagg cccgtaagaa gaagcgcgcc gctaaggccg 660 ccgccctcag tgctgagggc attattgatc gctcctataa ggggcgaact tacaaggtct 720 ctgtcagagg cctttcgtgg aaatctgtgc gggctgcaca gaaggctgcc aggagagcag 780 ccaaaaattt tgggttctct atctcggaga atcccttttc acatctccca tctgaaggga 840 gtatgtgtgc tgcaggtgaa attcctgctt ccgttccatc tgtggtttta ccacagattg 900 attgggctgc ccgcaaggcg gcctccaaga aggtgtcgtc tgaggacacc atggatgcgc 960 cctttcttgg gttgctcccg gagtctcccc gcctccgtaa tgaggggttg ctctcttcat 1020 tgagggctaa ggtcgccact cttgtggcga gcagggaccg tcaagtccct gtctcaaaaa 1080 gggtcgtcaa gacccaaaag cagaactcac gcagtgagtt ttgctttgag gaggcgcgca 1140 ctaccaagtg cgttattaac ggcaaaatag gtgttccgaa caaccctatt attcaacgcc 1200 ttctcccctt ccacaaaatc caaaggaagc ggatagtggc taaatttaag ccacaaacta 1260 tgtgctcctc aaggcacaat tatgacatgg ctcatcaaaa cgatgaatgt aggtggttca 1320 tctatccaac cactatcaaa attgagctta aagatgccta ccgaactgca aataatttag 1380 gcatcatatc agatgacgct tccgcgctcg agcgtgtacg ggccttttcc tctcaccatc 1440 tagacttaga gagggaagtg cttgcactcg aacgagagtg ccatccggcc ccaaggaaga 1500 ctattattgc cagagtgctt gccttcttta tggaggaata cgcgctggct tatgatgagg 1560 ccaaggaacg ccttaggttg caacgtgaag ataaacgtag ggagcatctt gcctttctac 1620 gtcatttgaa gcgccaagcg ttcgatcaat taactgccga acgagccgaa tacataaggg 1680 aaatttctga agctcgtgag gtagctttgg ctctccagcg gaaaattgag gagggcccgc 1740 caccgcaatt aatgtatatc cctgagtggc atgtcgttca aaaggccaag gagagtattg 1800 atctagatga tacactggtc tatgaaggac agcgcatagc tttgcgccag tgctacgaca 1860 ataggctaat gcatatgcaa agcgatcccg attctaagaa atcgcgtaaa ttcatagcgg 1920 cttgtggtag gcattttgag cgaattttcg gatatgctgt gcacaaaggc acaagaaccg 1980 aaacgatgac tcaggttgct gagtctcctc caccagtgat gatttcaccc ttggggcgaa 2040 cggttggagg aaatccacct acggaaacac caggaacttc tgctgttaga gcagctatgc 2100 aacgagcagt tgagcgcaat agacctggcc ccggcgaatc ttctgcaatg ccagctaggg 2160 aacctctgct ctcacataga gggcagtatt atgctcgttc tctctcagat agatataaca 2220 atatcttctc tcgcaataac gcttataatc tcatgcggga gactgacgtg cccatcatgg 2280 aattcacatt cgggcaacag caagatattg ccatccctct atcttcaaga tttggaaacc 2340 acccatccct ccatattggt gaattagaaa tagccgttca atcggcagtc ttatctggag 2400 tggatactgc aatggctatt atggtctctg atgcttcaca tgatagactc gaggagggtt 2460 tcttgagtct aactattttg agactgggtg ccgggtggat gcgccatact ataccgattg 2520 gcatcaccgt cttcccaacg gttcctctgg tcgatcgttt cttgagacta tcggttttaa 2580 ccgggggatc ccctatggca gatgggaggc aagtggctag gctccattat ggattgcttg 2640 gtcaagcata tacgggcgca ggcgagcaaa gattaactca atatgctact cgaagaatta 2700 acgtgcgtca aacgcatgtt actcaatttc tcgagggcaa tcatattcat attgctcgct 2760 ctgtggatag gcagcagccg ttaccccata tgattttgga gtatcggcct ctatctggga 2820 gtaccagata tgtggcacga cctggtggtt atcaagccgt agaaggtggt aggcagagtg 2880 tagatataac tcagaatttt atagcgatgc ctacacatct cacaagaagt gccacactcc 2940 gggatactga cgtgtcgggg cccgtaaatc caaacactgg gcgggtatct gaaagacaaa 3000 ttgatgataa tagcgagatc cctgttgctg atgaagaacc aattggtggt agacgccttc 3060 ccaggggctc tgccttccag agaggattta cagaattttc tgaaaggaat gagaataaga 3120 tagaacatct tttcgttcct tctatgcatg gtctctcact caaggaagat atccacttgt 3180 ttactaaaaa ccttgagata ccttctaccg ccgatttctg caaagagttg gttaggtata 3240 aggttatggc agaggccgtg aattatagga gtgccagcta ctactcgcgc ctattgtctg 3300 gggtagcaat tttgcgaccc catttcaaat ttacctgtag gctagtaact ccaattctgg 3360 aatccatacc tctacttata gtttgggatg atctttcaga gttaacatct aaagttgccc 3420 gactatctgc agcctttgaa atcattgatt cagatcacac tcgagctgct gtttatgagg 3480 ttcgtccatc gggaccaact gacctgttga ccccttcaaa agccaattac ggtatggggg 3540 gcgatcttgt tatcttttct ggtggttatg gttcttcttc tctatcttcg cctttaagac 3600 ttaaaatcga agcgagtctt ttaaaagatt cgcagttggg ttcaggtgag gttggagtgc 3660 ctcaaggtcc gtcatctatg ttatcatttc attatcttaa tgaggtggac cttggggatg 3720 taaatttgta tactttccta ggtagttgta aatacgattc taaatcagtt gtaaatagta 3780 ggaaatatat ttctatttgt ccggcagctg gtcttgtaca taataaagga aaagctgctt 3840 atttaggatt aacggcttct cttttttcca tgtataattt ttggaaggga agttatattt 3900 taaaggtgga cgttctttcc aaggggagtt gtgctggagc tattagcata tatgtgcccc 3960 caccaggcac aagcgctgat cactactctc aatcacaatt agataccctc ccacgttatg 4020 aattgccatg gaggggatcg ggatctgcca ggttcgaggt tgaaaatttt tcctggattg 4080 gttggcactt aaccaaaccc cagcgttttg tgaccaatga agattggttt tcgttgaatg 4140 ctggggtggt tgtggtgcta aaccagccac caacaacaag aactggtgga tcaagtgata 4200 taagagtgat atttcgtatt gttaaattta agaatctcac tcttaaggaa cgatccacaa 4260 cctgcgatat atttgcaggt ataaaagatg cgtcgtacac ttcaccgctt ttagatgtgc 4320 ttgataatac tatatcggca ccagcttcag tcgcatctga accagatgtt gggttggacg 4380 ctagctctag tgttcaaacc aatgatatgc tcccacgatc gtttggcgca tactatgcct 4440 atttattggg tggagcagta cctgggaaaa ggtggcactc gtatgtgctg cccataacaa 4500 tgggacacca cagaagtgaa atcggcacta caaagactgg gtatctaaat gaagaacttg 4560 acgatgcagt caggtataag gtattcgttg cgcaatccat tgcatatttt atgcgcaggg 4620 gggcctttta tgccgccgac ctccttttca ctctagtaat tgatggagat ttcacttccg 4680 aacgtgcttt cgctcagctt ggattgatcc aaactccctt gatggagtac tatgagggat 4740 attctaccga taggactctt tcgtccgaag ggggatgttc caaccaacta ggcgtgggca 4800 aatcatatat ncaattactt gtcccgagga gaaactatag ggctagatct gttacaacgt 4860 atacttctgt tctattcttt gaaacgattg gttccctttc gatacgattt actgtaagtg 4920 ataaaatcaa aggggttcac ctatttgttg aagcagtagg ccctattgat attgatgggt 4980 atgggagagg acttaatgtt ggatttaccg atgaatcctt cgttttaatg ccctcactcc 5040 gtacagccgc ttaagagtgg cattaggtga tgcccaccgg accttaacgt gggtttacat 5100 gtaaatacta gtgtgtattt cctgtttgtt tgttttgttt gttttcttaa aataaactgg 5160 atttcaaaaa gggtttctca aactcttccc tttccgatcc aggagtttcg cgtgtttttc 5220 ttgatttctg tcgcgtgcgg ttacgaccag tgaaagtctg gtggcc 5266 //