ID   AB465309; SV 1; linear; genomic RNA; STD; VRL; 1730 BP.
XX
AC   AB465309;
XX
DT   09-APR-2009 (Rel. 100, Created)
DT   05-DEC-2010 (Rel. 107, Last updated, Version 2)
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DE   Flammulina velutipes browning virus CP1 gene for coat protein, complete
DE   cds.
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KW   .
XX
OS   Flammulina velutipes browning virus
OC   Viruses; Riboviria; Partitiviridae; Alphapartitivirus.
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RN   [1]
RP   1-1730
RA   Magae Y., Sunagawa M.;
RT   ;
RL   Submitted (08-OCT-2008) to the INSDC.
RL   Contact:Yumi Magae Forestry and Forest Products Research Institute,
RL   Department of Applied Microbiology; Matsunosato 1, Tsukuba, Ibaraki
RL   305-8687, Japan
XX
RN   [2]
RC   Publication Status: Online-Only
RX   PUBMED; 21106114.
RA   Magae Y., Sunagawa M.;
RT   "Characterization of a mycovirus associated with the brown discoloration of
RT   edible mushroom, Flammulina velutipes";
RL   Virol J 7:342-342(2010).
XX
RN   [3]
RX   DOI; 10.1111/j.1574-6968.1999.tb08814.x.
RX   PUBMED; 10556730.
RA   Magae Y., Hayashi N.;
RT   "Double-stranded RNA and virus-like particles in the edible basidiomycete
RT   Flammulina velutipes (Enokitake)";
RL   FEMS Microbiol. Lett. 180(2):331-335(1999).
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RN   [4]
RA   Magae Y.;
RT   "Double stranded RNA elements in the cultivated Flammulina velutipes,
RT   Shinano No.6";
RL   Mushroom Sci. Biotechnol. 11:93-96(2003).
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DR   MD5; e38c0168adf2215eca4e3131c8488364.
DR   EuropePMC; PMC3002925; 21106114.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1730
FT                   /organism="Flammulina velutipes browning virus"
FT                   /segment="RNA2"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:568090"
FT   CDS             71..1462
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /transl_except=(pos:644..646,aa:OTHER)
FT                   /gene="CP1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:C0STM1"
FT                   /db_xref="UniProtKB/TrEMBL:C0STM1"
FT                   /protein_id="BAH56482.1"
FT                   /translation="MSPPRFPKPPVTPSASQTADPLGTRDVDSESSKPKLVNSRPQKAV
FT                   PRAGPTSAPSVSDANPIYHAVSNFPYYPHQRLDTSTFVPCTQVLFAVLAHMDNIMCTTY
FT                   SWTQSQPAWHPCVSRLYFSTLVYYQILRAMDAARIITVLQKELLNFLEHTIPASALPIP
FT                   GPLAPFLRSPFLLFNWHGWLLQCMSNHTXWPHHQKIKYNISSAFNNLLPNLVHAVDSAY
FT                   SFATDATYVFRSAVNDLNVKMEATDPDMPAAETRHWNSAMMDPVYRNDMYIPTRVAQNF
FT                   AAFSAPLGLPLRYNYGPDTDIGLSHFLYLSGGKHDYLNRLAPVFARYSQYFVNSKSLQE
FT                   CSPVGSAPGQINGTLTDAIPVPTISGTTVYTPSTLAALVTPWSSTTIYTHVNLSLPEFF
FT                   EHQAALTNVNVTEHGAAPTFGTTATTLNGSFWRMKPHYRESPPINVTKNLFNIISNEMF
FT                   AEPTS"
XX
SQ   Sequence 1730 BP; 411 A; 589 C; 272 G; 458 T; 0 other;
     gttattagtc gagcccctag ctcctatcac cttaaatttc ataactgcaa acttgctccc        60
     cccctcaacg atgtcccccc cccgcttccc caagcctccc gtcactccgt ctgcttcgca       120
     gactgccgat cctctcggca ctcgtgatgt cgattccgag tcttccaagc caaagcttgt       180
     gaactcacgt cctcaaaaag ccgtcccccg tgctggtcct acgtccgccc cgtccgtctc       240
     tgatgccaac cccatctacc acgccgtctc gaactttccg tactaccctc accaacgtct       300
     ggacacctcg accttcgttc cctgtactca ggtactcttc gctgttctgg ctcacatgga       360
     taacatcatg tgcaccactt actcttggac acaatctcaa cctgcctggc atccctgcgt       420
     ctcacgactc tacttttcca cgctcgtata ctaccagatt ctccgcgcca tggacgctgc       480
     ccgcatcatt actgttctcc agaaagaact tctcaatttc ttggaacaca ctattcctgc       540
     ctccgctctc ccaattcctg gccctctcgc tccctttctt cgaagccctt tcttgctctt       600
     caactggcat ggatggttac tacaatgtat gtccaatcat acctagtggc ctcatcacca       660
     gaaaatcaag tacaacatta gctccgcgtt caacaacctt cttccgaatc ttgttcacgc       720
     cgtagattca gcttacagct ttgccaccga tgcaacctat gtctttcgct ccgccgtcaa       780
     cgacctcaac gtcaagatgg aagcaactga tccggacatg cccgctgccg aaactcgtca       840
     ttggaactcc gccatgatgg accctgttta tcgcaacgat atgtatatcc caacccgcgt       900
     cgcacaaaac tttgctgctt tctccgcccc tcttggactc cccctccgct acaactacgg       960
     ccctgatacc gatatcggtc tcagtcactt tctctacctc tcaggtggaa aacacgacta      1020
     cctcaatcgt cttgcccccg tctttgctcg ctactcccag tacttcgtca actcgaagtc      1080
     cctccaagaa tgctctcccg tcggctccgc tcctggacaa atcaatggca ctctcactga      1140
     tgctattcct gtccccacta ttagtggaac aacagtctac acgccctcaa ccctcgccgc      1200
     gctcgtcacc ccctggtcct caacgaccat ctacacccac gtcaacttgt ctctgcccga      1260
     attcttcgag caccaagctg ccctcacgaa cgtcaacgtc accgaacacg gtgccgcacc      1320
     tacatttggc acaaccgcca ccacgctcaa tggctccttt tggagaatga agccccacta      1380
     ccgcgagtcc cccccgatca acgtgaccaa gaacttgttc aacatcattt ccaacgaaat      1440
     gtttgccgaa cctacttctt aatctccacg ctgtacaaat atttatgttt tgcgcattac      1500
     tccgtcccca cgaagtgtaa ccacgatggt tacgtatttt gtaattgttt cgatgtactt      1560
     caacagtact atcctttttt cctctatcga ttttagtctt catgactaaa tacacgtatt      1620
     caactacgtt gtaactattt atttagttgc gttgtcttac aacgtcctac aaataaaaaa      1680
     aaaaaaaaaa aaaaaaaatt aaaataaaac aaacacaaaa aaaatatatg                 1730
//