ID   AB465308; SV 1; linear; genomic RNA; STD; VRL; 1915 BP.
XX
AC   AB465308;
XX
DT   09-APR-2009 (Rel. 100, Created)
DT   05-DEC-2010 (Rel. 107, Last updated, Version 2)
XX
DE   Flammulina velutipes browning virus RdRp gene for RNA-dependent RNA
DE   polymerase, complete cds.
XX
KW   .
XX
OS   Flammulina velutipes browning virus
OC   Viruses; Riboviria; Orthornavirae; Pisuviricota; Duplopiviricetes;
OC   Durnavirales; Partitiviridae; Alphapartitivirus.
XX
RN   [1]
RP   1-1915
RA   Magae Y., Sunagawa M.;
RT   ;
RL   Submitted (08-OCT-2008) to the INSDC.
RL   Contact:Yumi Magae Forestry and Forest Products Research Institute,
RL   Department of Applied Microbiology; Matsunosato 1, Tsukuba, Ibaraki
RL   305-8687, Japan
XX
RN   [2]
RC   Publication Status: Online-Only
RX   PUBMED; 21106114.
RA   Magae Y., Sunagawa M.;
RT   "Characterization of a mycovirus associated with the brown discoloration of
RT   edible mushroom, Flammulina velutipes";
RL   Virol J 7:342-342(2010).
XX
RN   [3]
RX   DOI; 10.1111/j.1574-6968.1999.tb08814.x.
RX   PUBMED; 10556730.
RA   Magae Y., Hayashi N.;
RT   "Double-stranded RNA and virus-like particles in the edible basidiomycete
RT   Flammulina velutipes (Enokitake)";
RL   FEMS Microbiol. Lett. 180(2):331-335(1999).
XX
RN   [4]
RA   Magae Y.;
RT   "Double stranded RNA elements in the cultivated Flammulina velutipes,
RT   Shinano No.6";
RL   Mushroom Sci. Biotechnol. 11:93-96(2003).
XX
DR   MD5; 72510389da0f08983cb498d26b822bc0.
DR   EuropePMC; PMC3002925; 21106114.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1915
FT                   /organism="Flammulina velutipes browning virus"
FT                   /segment="RNA1"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:568090"
FT   CDS             56..1798
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="RdRp"
FT                   /product="RNA-dependent RNA polymerase"
FT                   /db_xref="GOA:C0STM0"
FT                   /db_xref="InterPro:IPR001795"
FT                   /db_xref="UniProtKB/TrEMBL:C0STM0"
FT                   /protein_id="BAH56481.1"
FT                   /translation="MSDTLIDSFSRLTLSVKNFVFLGFTETQNYPQKSDSAILSHRKVV
FT                   LNAFEKYLNPIEYNHVANEYKRSETDLDSTKAAFFKGDIPDHEVPRDEHYNRAFSVIVS
FT                   KFRPPEPIRPVHYADLRLYPWPLKPSAEAPFSNDKSLLALLALRNRQGFLPNAKPNFHN
FT                   LFNWVFGFNRQCVHLIKKGKDNLGPNEYWPAHGFLYPINIHTKSAIIGIHDPNKVRTIF
FT                   GVPKLTVMVEAMFFWPLFRYYRFEQQSPLLWGYETMLGGWYKLNHELHLNPFYQGSILS
FT                   LDWSFFDGRALFSVINDLYSDKGVKSYFEFNNGYIPTVDYPDSSTHPQKLHNLWDWMLT
FT                   ALKFAPCALADGTIWQRTVRGIASGQFTTQFMDSIYNGLMILTILSRMGFVIDETLPIK
FT                   LLGDDSVTRLAVSIPASMHESFLIEFQRLADYYFSHTINVKKSKISNTPHNVSVLSYAN
FT                   NNGLPVRSRTSLLCALLYPKSRRPTWEHLKARAIGVYYASCGIDRTVRLICKDIFDYLD
FT                   SQGIQASSAGLQDLFDPNFKSGTIPLDVFPSVEQVTTNLRSFHHLDNSDKERYFPTSHF
FT                   LDTK"
XX
SQ   Sequence 1915 BP; 552 A; 532 C; 307 G; 524 T; 0 other;
     gttaaaagga actctcaact tccccaactt aaatttcata agcaaaacac aactgatgtc        60
     cgatacatta atcgactcct tctcacgact cacactctca gtcaagaact tcgtattttt       120
     aggtttcact gaaacccaga actaccccca aaagtcagac tccgctatcc tttcccaccg       180
     gaaagtcgtt ctcaacgcat ttgaaaagta tctcaatcct attgaataca atcatgttgc       240
     caacgaatac aagcgatccg aaactgatct tgattcaacg aaagctgcct ttttcaaagg       300
     tgacattcct gatcatgaag ttccccgcga cgaacactac aatcgtgcgt tctctgtcat       360
     cgtcagcaag ttcagacctc ctgaaccaat ccgacctgta cactacgctg atcttcgtct       420
     ctacccctgg ccactcaagc catcggctga agcaccgttc tcaaacgata agtcgttact       480
     agctctgcta gcactcagaa accgtcaagg tttcctcccg aatgccaagc caaacttcca       540
     caacctattt aactgggtat ttggatttaa tcgacaatgc gtccacctca tcaaaaaagg       600
     taaagacaat ctaggcccca atgaatattg gcccgcccac ggatttctct atcctatcaa       660
     catacacaca aagtctgcca ttattggcat ccacgatcct aacaaagttc gtactatctt       720
     tggtgtaccc aagctcactg ttatggttga agccatgttc ttctggcccc tcttccgtta       780
     ttacagattt gagcaacaat ccccactgct atggggatac gaaaccatgt taggcggttg       840
     gtacaaactc aatcacgagt tacaccttaa cccgttctac caaggttcaa tcctatcact       900
     agattggtca ttctttgacg gccgagctct cttctctgtc atcaacgacc tctattccga       960
     taaaggagta aaatcctatt tcgaattcaa caatggatac attccaacag ttgactaccc      1020
     tgattcttct actcatcctc agaaacttca caatctctgg gactggatgc tcaccgcact      1080
     caagttcgct ccttgcgctc ttgctgacgg caccatctgg caacgaactg tccgaggcat      1140
     cgcctccggc caattcacaa ctcaattcat ggactctatt tacaatggac tcatgatact      1200
     aacaattcta tctagaatgg gattcgtcat agacgaaacc cttcctatca agctattggg      1260
     cgacgattct gtcactcgac ttgctgtctc gatccctgct agtatgcatg aatcattcct      1320
     catagaattt caacgtctcg cagattatta cttctcacac actatcaatg tcaagaagtc      1380
     taaaatctcg aacacccctc ataacgtaag cgttctcagc tatgccaaca acaatggcct      1440
     ccctgtccgt tcacgtacct cactactttg cgctctgctg taccctaagt ctcgccgacc      1500
     tacatgggaa catctcaaag cacgcgctat tggcgtttat tacgccagtt gcggtatcga      1560
     ccgtactgta cgccttatat gcaaagacat atttgactac cttgattctc aaggcattca      1620
     agcttcttct gctggcctac aagacctatt cgatcccaac tttaagtcag gcactatacc      1680
     actcgacgta tttccgtctg tggaacaagt aactacaaat ttgcgaagtt tccatcatct      1740
     tgataattcc gataaagagc ggtacttccc tacctctcat ttcttggata ccaagtaatg      1800
     gtttcacgcc gctgcgtgat cttgtcttta aaagtaaaat tttaaattaa aaaaaaaaaa      1860
     aaaaaaatta aaactcaaaa aacaaaaaac aaatcgatcc tgcaggctag agaca           1915
//