ID AB461489; SV 1; linear; genomic RNA; STD; VRL; 2394 BP. XX AC AB461489; XX DT 02-MAR-2011 (Rel. 108, Created) DT 02-MAR-2011 (Rel. 108, Last updated, Version 1) XX DE Potato virus Y gene for polyprotein (NIb and CP region), partial cds, DE isolate: PVY-Bu3. XX KW . XX OS Potato virus Y OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [1] RP 1-2394 RA Chikh Ali M., Maoka T., Natsuaki K.T.; RT ; RL Submitted (23-SEP-2008) to the INSDC. RL Contact:Mohamad Chikh Ali Laboratory of Plant Pathology, Faculty of RL Agriculture, Utsunomiya University, International Agricultural Development; RL Mine-machi 350, Utsunomiya 321-8505, Japan XX RN [2] RA Chikh Ali M., Maoka T., Natsuaki K.T.; RT "Characterization of novel PVY isolates from Syria"; RL Unpublished. XX DR MD5; 23c3ed166d24b4c3fb67da43ca947c39. XX FH Key Location/Qualifiers FH FT source 1..2394 FT /organism="Potato virus Y" FT /lab_host="Nicotiana tabacum cv. Samsun" FT /isolate="PVY-Bu3" FT /mol_type="genomic RNA" FT /country="Syria:Aleppo" FT /collected_by="Dunia Wafai Baaj" FT /collection_date="2004" FT /identified_by="Mohamad Chikh Ali" FT /db_xref="taxon:12216" FT CDS <1..2086 FT /codon_start=2 FT /transl_table=1 FT /product="polyprotein" FT /db_xref="GOA:E9REJ4" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001592" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:E9REJ4" FT /protein_id="BAJ79039.1" FT /translation="AINRVIIYLQVHGFKKCAYVTDEQEIFKALNMKAAVGAMYGGKKK FT DYFEHFTDADKEEIVMQSCLRLYKGLLGIWNGSLKAELRCKEKILANKTRTFTAAPLDT FT LLGGKVCVDDFNNQFYSKNIECCWTVGMTKFYGGWDKLLRRLPENWVYCDADGSQFDSS FT LTPYLINAVLIIRSTYMEDWDVGLQMLRNLYTEIVYTPISTPDGTIVKKFRGNNSGQPS FT TVVDNSLMVVLAMHYALIKECIEFEEIDSTCVFFVNGDDLLIAVNPDKEGILDRLSQHF FT SDLGLNYDFSSRTRNKEELWFMSHRGLLIEGMYVPKLEEERIVSILQWDRADLAEHRLE FT AICAAMIESWGYSELTHQIRRFYSWLLQQQPFATIAQEGKAPYIASMALRKLYMDRAVD FT EEELRAFTEMMVALDDEFEFDSYEVYHQANDTIDAGGSSKKDARPEQGSIQSNPNKGKD FT KDVNAGTSGTHTVPRIKSITSKMRMPKSKGATVLNLEHLLEYAPQQIDISNTRATQSQF FT DTWYEAVRMAYDIGETEMPTVMNGLMVWCIENGTSPNVNGVWVMMDGDEQVEYPLKPIV FT ENAKPTLRQIMAHFSDVAEAYIEMRNKKEPYMPRYGLIRNLRDVGLARYAFDFYEVTSR FT TPVRAREAHIQMKAAALKSAQPRLFGLDGGISTQEENTERHTTEDVSPSMHTLLGVKNM FT " FT mat_peptide <1..1282 FT /gene="NIb" FT /product="NIb replicase" FT mat_peptide 1283..2083 FT /gene="CP" FT /product="coat protein" FT 3'UTR 2087..>2394 XX SQ Sequence 2394 BP; 714 A; 427 C; 598 G; 655 T; 0 other; ggctatcaat agggttatca tctacctgca agtgcacggc ttcaagaagt gcgcatacgt 60 cactgacgag caagaaattt tcaaagcgct caacatgaaa gctgcagtcg gagccatgta 120 tggtggcaaa aagaaagact attttgagca tttcactgat gcagataagg aagaaatagt 180 catgcaaagc tgtctgcgat tgtataaagg cttgcttggc atttggaatg gatcattgaa 240 ggcagagctc cggtgtaagg aaaagatact tgcaaataag acgaggacat tcactgctgc 300 acctttagac actttgctgg gtggtaaagt gtgtgttgat gacttcaata atcaatttta 360 ttcaaagaat attgaatgct gttggacggt tgggatgact aagttttatg gtggttggga 420 taaactgctg cggcgtttac ctgagaattg ggtatactgt gatgccgatg gctcgcagtt 480 tgatagttca ctaactccat acttaatcaa tgctgttctc atcattagaa gcacatacat 540 ggaagattgg gatgtggggt tgcaaatgtt gcgcaattta tatactgaga ttgtttacac 600 acctatttca actccagatg gaacaattgt taagaagttc agaggaaata acagtggtca 660 gccttccact gttgtggaca actctcttat ggtcgtcctt gccatgcact atgctctcat 720 caaagaatgc attgagtttg aagagattga cagcacgtgc gtattctttg tcaatggtga 780 tgatttgctg attgctgtga atccggataa agagggcatt cttgacagat tgtcacaaca 840 cttctcagat cttggtttga attatgattt ctcgtcaaga acaagaaata aggaggagtt 900 gtggtttatg tctcatagag gcctactgat tgagggcatg tacgtgccga aacttgaaga 960 agaaaggatt gtgtccattc tccaatggga cagagcagac ttggctgaac ataggcttga 1020 ggcgatttgc gcagctatga tagagtcctg gggttattct gaactaacac accaaatcag 1080 gagattctac tcatggttat tgcaacagca accctttgca acaatagcgc aggaagggaa 1140 ggctccttat atagcaagca tggcattaag gaaattgtat atggataggg ctgtggatga 1200 ggaagagctg agagccttca ctgaaatgat ggtcgcatta gacgatgagt ttgaatttga 1260 ctcttatgaa gtataccatc aagcaaatga cacaatcgat gcaggaggaa gcagcaagaa 1320 agatgcaaga ccagagcaag gcagcatcca gtcaaacccg aacaaaggaa aagataagga 1380 tgtgaatgct ggtacatctg ggacacatac tgtgccgaga atcaagtcta tcacgtccaa 1440 aatgagaatg cccaaaagca agggagcaac cgtgctaaac ttagaacact tgcttgagta 1500 tgctccacaa caaattgata tttcaaatac tcgggcaact caatcacagt ttgatacgtg 1560 gtatgaggca gtgcggatgg catacgacat aggagaaact gagatgccaa ctgtgatgaa 1620 tgggcttatg gtttggtgca ttgaaaatgg aacctcgcca aatgtcaacg gagtttgggt 1680 tatgatggat ggggatgaac aagtcgagta cccgttgaaa ccaatcgttg agaatgcaaa 1740 accaaccctt aggcaaatca tggcacattt ctcagatgtt gcagaagcgt atatagaaat 1800 gcgcaacaaa aaggaaccat atatgccacg atatggttta attcgaaatc tgcgggatgt 1860 gggtttagcg cgttatgcct ttgactttta tgaggtcaca tcacgaacac cagtgagggc 1920 tagggaagcg cacattcaaa tgaaggccgc agcgttgaaa tcagcccaac ctcgactttt 1980 cgggttggac ggtggcatca gtacacaaga ggagaacaca gagaggcaca ccaccgagga 2040 tgtctctcca agtatgcata ctctacttgg agttaagaac atgtgatgta gtgtctctcc 2100 ggacgatata taagtattta catatgcagt aagtattttg gcttttcctg tactactttt 2160 atcataatta ataatcagtt tgaatattac taatagatag aggtggcagg gtgatttcgt 2220 cattgtggtg actctatctt ttaattccgc attattaagt cttagataaa agtgccgggt 2280 tgtcgttgtt gtggatgatt catcgattag gtgatgttgc gattctgtcg tagcagtgac 2340 tatgtctgga tctatctgct tgggtggtgt tgtgatttcg tcataacagt gact 2394 //