ID AB461488; SV 1; linear; genomic RNA; STD; VRL; 2691 BP. XX AC AB461488; XX DT 02-MAR-2011 (Rel. 108, Created) DT 02-MAR-2011 (Rel. 108, Last updated, Version 1) XX DE Potato virus Y gene for polyprotein (P1, HC-Pro and P3 region), partial DE cds, isolate: PVY-Bu3. XX KW . XX OS Potato virus Y OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [1] RP 1-2691 RA Chikh Ali M., Maoka T., Natsuaki K.T.; RT ; RL Submitted (23-SEP-2008) to the INSDC. RL Contact:Mohamad Chikh Ali Laboratory of Plant Pathology, Faculty of RL Agriculture, Utsunomiya University, International Agricultural Development; RL Mine-machi 350, Utsunomiya 321-8505, Japan XX RN [2] RA Chikh Ali M., Maoka T., Natsuaki K.T.; RT "Characterization of novel PVY isolates from Syria"; RL Unpublished. XX DR MD5; 843abf3552266dfbf43ea02d80d0a1d1. XX FH Key Location/Qualifiers FH FT source 1..2691 FT /organism="Potato virus Y" FT /lab_host="Nicotiana tabacum cv. Samsun" FT /isolate="PVY-Bu3" FT /mol_type="genomic RNA" FT /country="Syria:Aleppo" FT /collected_by="Dunia Wafai Baaj" FT /collection_date="2004" FT /identified_by="Mohamad Chikh Ali" FT /db_xref="taxon:12216" FT 5'UTR <1..166 FT CDS 167..>2691 FT /codon_start=1 FT /transl_table=1 FT /product="polyprotein" FT /db_xref="GOA:E9REJ3" FT /db_xref="InterPro:IPR001456" FT /db_xref="InterPro:IPR002540" FT /db_xref="InterPro:IPR031159" FT /db_xref="InterPro:IPR039560" FT /db_xref="InterPro:IPR042308" FT /db_xref="UniProtKB/TrEMBL:E9REJ3" FT /protein_id="BAJ79038.1" FT /translation="MATYMSTICFGSFECKLPYSPASCGHIVKEREVLASVDPFADLET FT QLSARLLKQEYATVRVLKNGTLTYRYKTDAQITRIQKKLERKDREEYHFQMAAPSIVSK FT ITIAGGEPPSKLESQVRRGVIHTTPRMRTAKTYHTPKLTEGQMNHLIKQVKQIMSTKGG FT SVQLISKKSTHVHYKEVLGSHRAVVCTAHMRGLRKRVDFWCDKWTVVRLQHLARTNKWN FT NQVRATDLRKGDSGVILSNTNLKGNFGRSSEGIFIVRGSHEGKIYDARSKVTQGVMDSM FT VQFSSAESFWKGLDGNWAQMRYPTDHTCVAGLPVEDCGRVAAIMTHSILPCYKITCPTC FT AQQYANLPASDLLKILHKHASDGLNRLGADKDRFVHVKKFLTILEHLTEPVDLSLEIFN FT EVFKSIGEKQQSPFKNLNILNNFFLKGKENTAREWQVAQLSLLELARFQKNRTDNIKKG FT DISFFRNKLSAKANWNLYLSCDNQLDKNANFLWGQREYHAKRFFSNYFEEIDPAKGYSA FT YENRLHPNGTRKLAIGNLIVPLDLAEFRRKMKGDYKRQPGVSKKCTSSKDGNYVYPCCC FT TTLDDGSAVESTFYPPTKKHLVIGNSGDQKYVDLPKGNSEMLYIARQGFCYINIFLAML FT INISEEDAKDFTKRVRDMCVPKLGTWPTMMDLATTCAQMRIFYPDVHDAELPRILVDHE FT TQTCHVVDSFGSQTTGYHILKASSVSQLILFANDELESDIKHYRVGGVPNACPELGSTI FT SPFREGGVIMSESAALKLLLKGIFRPKVMRQLLLDEPYLLILSILSPGILMAMYNNGIF FT ELAVRLWINEKQSIAMIASLLSALALRVSA" FT mat_peptide 167..991 FT /gene="P1" FT /product="P1 protein" FT mat_peptide 992..2386 FT /gene="HC-Pro" FT /product="helper component protein" FT mat_peptide 2387..>2691 FT /gene="P3" FT /product="P3 protein" XX SQ Sequence 2691 BP; 843 A; 523 C; 608 G; 717 T; 0 other; caacataaga aaaacaacgc aaaaacactc ataaacgctt attctcactc aagcaacttg 60 ctaagtttca gtttaaatca tttccttgca attctcttaa acgatattgg aaaccatttc 120 aacttaacaa gtaatttcat cacttccaac caattttaga tcctcaatgg caacttacat 180 gtcaacaatc tgtttcggtt cgtttgaatg caagctacca tactcacccg cctcttgcgg 240 gcatattgtg aaggaacgag aagtgctggc ttccgttgat cctttcgcag atctggaaac 300 acaacttagt gcacgattac ttaagcaaga atatgctact gttcgtgtgc tcaagaacgg 360 tactcttacg taccgataca agactgatgc ccagataacg cgcatccaga agaaactgga 420 aaggaaggat agggaagaat atcacttcca gatggcagct cctagtattg tgtcaaagat 480 cactattgct ggtggagagc caccttcaaa acttgaatca caagtgcgga ggggtgtcat 540 ccacacaact ccaaggatgc gcacagcaaa aacatatcac acgccaaagt tgacagaggg 600 acaaatgaac caccttatca agcaggtgaa gcaaattatg tcaaccaaag gagggtccgt 660 tcaactgatt agcaagaaaa gtacccatgt tcactataaa gaagttttgg gatcacatcg 720 cgcagttgtt tgcactgcac atatgagagg tttacgaaag agagtggact tttggtgtga 780 taaatggacc gttgtgcgtc tacagcatct cgccaggacg aacaagtgga ataaccaagt 840 tcgtgctact gatctacgca agggcgatag tggagttata ttgagtaata ctaatctcaa 900 aggaaacttt gggagaagct cggagggcat attcatagtg cgtgggtcgc acgaaggaaa 960 aatctatgat gcacgttcca aggttactca aggggttatg gattcaatgg ttcagttctc 1020 aagcgctgaa agcttttgga agggattgga cggcaattgg gcacaaatga gatatcctac 1080 agatcataca tgtgtggcag gcttaccagt tgaagactgc ggcagagttg cagcgataat 1140 gacacacagt attttaccgt gctataagat aacctgccct acctgtgccc aacaatatgc 1200 caacttgcca gccagtgact tacttaagat attacacaag cacgcaagtg atggtttaaa 1260 tcgattgggg gcagacaaag atcgctttgt gcatgtcaaa aagttcttga caatcttaga 1320 gcacttaact gaaccggttg atctgagtct agaaattttc aatgaagtat tcaagtctat 1380 aggggagaag caacaatcac ctttcaaaaa cctgaatatt ctgaataatt tctttttgaa 1440 aggaaaggaa aatacagctc gtgaatggca ggtggctcaa ttaagcttac ttgaattggc 1500 aagattccaa aagaacagaa cggataatat caagaaagga gacatctcgt tctttaggaa 1560 taaactatct gccaaagcaa attggaactt gtatctgtca tgtgataacc agctggataa 1620 gaatgcaaac ttcctgtggg gacagaggga atatcatgct aagcgatttt tctcgaacta 1680 tttcgaggaa attgatccag cgaagggcta ttcagcatat gaaaatcgtt tgcatccgaa 1740 tgggacaaga aaacttgcaa ttggaaacct aattgtacca cttgatctgg ctgagtttag 1800 gcggaagatg aaaggtgatt ataaaagaca gccaggggtg agtaagaagt gcacgagctc 1860 gaaggatgga aactacgtgt atccctgttg ttgcactaca cttgatgatg gctcagctgt 1920 tgaatcaaca ttttacccgc caactaagaa gcacctcgta ataggtaata gtggcgacca 1980 aaagtatgtt gacttaccaa aagggaattc tgagatgtta tatattgcca ggcaaggctt 2040 ctgttacatt aacattttcc tcgcgatgtt gattaacatt agtgaggaag atgcaaagga 2100 tttcactaag agggttcgtg acatgtgtgt gccaaagctt ggaacctggc caaccatgat 2160 ggatctggct acaacttgtg ctcaaatgag aatattctac cctgatgttc atgatgcaga 2220 actgcctaga atactagttg atcacgaaac gcagacatgc catgtggttg actcgtttgg 2280 ctcacaaaca actgggtatc atattttgaa agcatctagc gtgtcccaac ttattttgtt 2340 tgctaatgat gagttggagt ctgacattaa acattataga gttggtggtg ttcctaatgc 2400 atgccctgaa cttgggtcca caatatcacc tttcagagaa ggaggagtta taatgtctga 2460 gtcggcagcg ctgaaactgc ttttgaaggg aatttttaga cctaaggtga tgagacagtt 2520 gctgttagat gagccttacc tgttgattct atcaatatta tcccctggca tattgatggc 2580 tatgtacaat aatgggattt ttgaacttgc agtaaggttg tggattaatg agaaacaatc 2640 catagctatg atagcatcgc tactatcagc tttagcccta cgagtgtcag c 2691 //