ID   AB461465; SV 1; linear; genomic RNA; STD; VRL; 1071 BP.
XX
AC   AB461465;
XX
DT   09-NOV-2009 (Rel. 102, Created)
DT   18-JAN-2010 (Rel. 103, Last updated, Version 2)
XX
DE   Potato virus Y gene for polyprotein (P1 and HC-Pro region), partial cds,
DE   isolate: SYR-II-A20.
XX
KW   .
XX
OS   Potato virus Y
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1071
RA   Chikh Ali M., Maoka T., Natsuaki K.T.;
RT   ;
RL   Submitted (23-SEP-2008) to the INSDC.
RL   Contact:Mohamad Chikh Ali Laboratory of Plant Pathology, Faculty of
RL   Agriculture, Utsunomiya University, International Agricultural Development;
RL   Mine-machi 350, Utsunomiya 321-8505, Japan
XX
RN   [2]
RX   DOI; 10.1111/j.1365-3059.2009.02174.x.
RX   AGRICOLA; IND44310597.
RA   Chikh Ali M., Maoka T., Natsuaki T., Natsuaki K.T.;
RT   "PVYNTN?NW, a novel recombinant strain of Potato virus Y predominating in
RT   potato fields in Syria";
RL   Plant Pathol. 59(1):31-41(2010).
XX
DR   MD5; 1eff28f02c8bf6271f2424eed6480d30.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1071
FT                   /organism="Potato virus Y"
FT                   /host="Solanum nigrum"
FT                   /lab_host="Nicotiana tabacum cv. Samsun"
FT                   /isolate="SYR-II-A20"
FT                   /mol_type="genomic RNA"
FT                   /country="Syria:Aleppo"
FT                   /collected_by="Katsumi Katayama"
FT                   /collection_date="2004"
FT                   /identified_by="Mohamad Chikh Ali"
FT                   /db_xref="taxon:12216"
FT   5'UTR           <1..166
FT   CDS             167..>1071
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:D0FY94"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:D0FY94"
FT                   /protein_id="BAI48910.1"
FT                   /translation="MATYMSTICFGSFECKLPYSPASCGHIVKEREVLASVDPFADLET
FT                   QLSARLLKQEYATVRVLKNGTLTYRYKTDAQITRIQKKLERKDREEYHFQMAAPSIVSK
FT                   ITIAGGEPPSRLEPQVRRGVIHTTPRMRTAKTYHTPKLTEGQINHLIKQVKQIMSTKGG
FT                   SVQLISKKSTHVHYKEVLGSHRAVVCTAHMRGLRKRVDFRCDKWTVVRLQHLARTDKWN
FT                   NQVRATDLRKGDSGVILSNTNLKGNFGRSSEGIFIVRGSHEGKIYDARSKVTQGVMDSM
FT                   VQFSSAESFWKGLDGNWAQM"
FT   mat_peptide     167..991
FT                   /gene="P1"
FT                   /product="P1 protein"
FT   mat_peptide     992..>1071
FT                   /gene="HC-Pro"
FT                   /product="helper component protein"
XX
SQ   Sequence 1071 BP; 341 A; 226 C; 242 G; 262 T; 0 other;
     caacataaga aaaacaacgc aaaaacactc ataaacgctt attctcactc aagcaacttg        60
     ctaagtttca gtttaaatca ttgccttgca attctcttaa acgatattgg aaaccatttc       120
     aactcaacaa gtaatttcat cacttccaac caattttaga tcctcaatgg caacttacat       180
     gtcaacaatc tgtttcggtt cgtttgaatg caagctacca tactcacccg cctcttgcgg       240
     gcatattgtg aaggaacgag aagtgttggc ttccgttgat cctttcgcag atctggaaac       300
     acaacttagt gcacgattgc tcaagcaaga atatgctact gttcgtgtgc tcaagaacgg       360
     tactcttacg taccgataca agactgatgc ccagataacg cgcatccaga agaaactgga       420
     aaggaaggat agggaagaat atcacttcca gatggcagct cctagtattg tgtcaaagat       480
     cactattgct ggtggagagc caccttcaag acttgaacca caagtgcgga ggggtgtcat       540
     ccacacaact ccaaggatgc gcacagcaaa aacatatcac acgccaaagt tgacagaggg       600
     acaaataaac caccttatca agcaggtgaa gcaaattatg tcaaccaaag gagggtctgt       660
     tcaactgatt agcaagaaaa gtacccatgt tcactataaa gaagttttgg gatcacatcg       720
     cgcagttgtt tgcactgcac atatgagagg tttacgaaag agagtggact ttcggtgtga       780
     taaatggacc gttgtgcgtc tacagcatct cgccaggacg gacaagtgga ataaccaagt       840
     tcgtgctact gatctacgca agggcgatag tggagttata ttgagtaata ctaatctcaa       900
     aggaaacttt gggagaagct cggagggcat attcatagtg cgtgggtcgc acgaaggaaa       960
     aatctatgat gcacgttcca aggttactca aggggttatg gattcaatgg ttcagttctc      1020
     aagcgctgaa agcttttgga agggattgga cggcaattgg gcacaaatga a               1071
//