ID   AB461457; SV 1; linear; genomic RNA; STD; VRL; 1243 BP.
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AC   AB461457;
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DT   09-NOV-2009 (Rel. 102, Created)
DT   18-JAN-2010 (Rel. 103, Last updated, Version 2)
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DE   Potato virus Y gene for polyprotein (P1 and HC-Pro region), partial cds,
DE   isolate: SYR-III-2-4.
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KW   .
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OS   Potato virus Y
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
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RN   [1]
RP   1-1243
RA   Chikh Ali M., Maoka T., Natsuaki K.T.;
RT   ;
RL   Submitted (23-SEP-2008) to the INSDC.
RL   Contact:Mohamad Chikh Ali Laboratory of Plant Pathology, Faculty of
RL   Agriculture, Utsunomiya University, International Agricultural Development;
RL   Mine-machi 350, Utsunomiya 321-8505, Japan
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RN   [2]
RX   DOI; 10.1111/j.1365-3059.2009.02174.x.
RX   AGRICOLA; IND44310597.
RA   Chikh Ali M., Maoka T., Natsuaki T., Natsuaki K.T.;
RT   "PVYNTN?NW, a novel recombinant strain of Potato virus Y predominating in
RT   potato fields in Syria";
RL   Plant Pathol. 59(1):31-41(2010).
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DR   MD5; 7f983e1094a7f0fb29a1701cbc4e8b7f.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1243
FT                   /organism="Potato virus Y"
FT                   /lab_host="Nicotiana tabacum cv. Samsun"
FT                   /isolate="SYR-III-2-4"
FT                   /mol_type="genomic RNA"
FT                   /country="Syria:Aleppo"
FT                   /collected_by="Mohamad Chikh Ali"
FT                   /collection_date="2006"
FT                   /identified_by="Mohamad Chikh Ali"
FT                   /db_xref="taxon:12216"
FT   5'UTR           <1..166
FT   CDS             167..>1243
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:D0FY88"
FT                   /db_xref="InterPro:IPR001456"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:D0FY88"
FT                   /protein_id="BAI48904.1"
FT                   /translation="MATYMSTICFGSFECKLPYSPASCGHIVKEREVLASVDPFADLET
FT                   QLSARLLKQEYATVRVLKNGTLTYRYKTDAQITRIQKKLERKDREEYHFQMAAPSIVSK
FT                   ITIAGGDPPSKSEPQAPRGIIHTTPRVRKVKTRPIIKLTEGQMNHLIKQVKQIMSEKRG
FT                   SVHLISKKSTHVHYKEVLGSHRAVVCTAHMRGLRKRVDFRCDKWTVVRLQHLARTDKWN
FT                   NQVRATDLRKGDSGVILSNTNLKGNFGRSSEGLFIVRGSHEGKIYDARSKVTQGVMDSM
FT                   IQFSSAESFWKGLDGNWAQMRYPADHTCVAGLPVEDCGRVAAIMTHSILPCYKITCPTC
FT                   AQQYANLPASDLLKILHKH"
FT   mat_peptide     167..991
FT                   /gene="P1"
FT                   /product="P1 protein"
FT   mat_peptide     992..>1243
FT                   /gene="HC-Pro"
FT                   /product="helper component protein"
XX
SQ   Sequence 1243 BP; 391 A; 269 C; 275 G; 308 T; 0 other;
     caacataaga aaaacaacgc aaaaacactc ataaacgctt attctcactc aagcaacttg        60
     ctaagtttca gtttaaatca tttccttgca attctcttaa acgatattgg aaaccatttc       120
     aactcaacaa gtaatttcat cactcccaac caattttaaa tcctcaatgg caacttacat       180
     gtcaacaatc tgtttcggtt cgtttgaatg caagctacca tactcacccg cctcttgcgg       240
     gcacattgtg aaggaacgag aagtgctggc ttccgttgat cctttcgcag atctggaaac       300
     acaacttagt gcacgattgc tcaagcaaga atatgctact gttcgtgtgc tcaagaacgg       360
     tactcttacg taccgataca agactgatgc ccagataacg cgcatccaga agaaactgga       420
     aaggaaggac agggaagaat atcacttcca gatggcagct cctagtattg tgtcaaaaat       480
     tactatagct ggtggggatc ctccatcaaa gtctgagcca caagcaccaa gaggtatcat       540
     tcatacaact ccaagggtgc gtaaagtcaa gacacgcccc ataataaagt tgacagaagg       600
     ccagatgaat catctcatta agcaggtgaa gcagattatg tcggagaaga gagggtctgt       660
     tcacttaatt agcaagaaaa gtacccatgt tcactataaa gaagttttgg gatcacatcg       720
     cgcagttgtt tgcactgcac atatgagagg tttacgaaag agagtggact ttcggtgtga       780
     taaatggacc gttgtgcgtc tacagcatct cgccaggacg gacaagtgga ataaccaagt       840
     tcgtgctact gatctacgca agggcgatag tggagttata ttgagtaata ctaatctcaa       900
     aggaaacttt gggagaagct cggagggcct attcatagtg cgtgggtcgc acgaaggaaa       960
     aatctatgat gcacgttcca aggttactca aggggttatg gattcaatga ttcagttctc      1020
     aagcgctgaa agcttttgga agggattgga cggcaattgg gcacaaatga gatatcctgc      1080
     agatcataca tgtgtggcag gcttaccagt tgaagactgc ggcagagttg cagcgataat      1140
     gacacacagt attttaccgt gctataagat aacctgccct acctgtgccc aacaatatgc      1200
     caacttgcca gccagtgact tacttaagat attacacaag cac                        1243
//