ID   AB461455; SV 1; linear; genomic RNA; STD; VRL; 1072 BP.
XX
AC   AB461455;
XX
DT   09-NOV-2009 (Rel. 102, Created)
DT   18-JAN-2010 (Rel. 103, Last updated, Version 2)
XX
DE   Potato virus Y gene for polyprotein (P1 and HC-Pro region), partial cds,
DE   isolate: SYR-I-15.
XX
KW   .
XX
OS   Potato virus Y
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1072
RA   Chikh Ali M., Maoka T., Natsuaki K.T.;
RT   ;
RL   Submitted (23-SEP-2008) to the INSDC.
RL   Contact:Mohamad Chikh Ali Laboratory of Plant Pathology, Faculty of
RL   Agriculture, Utsunomiya University, International Agricultural Development;
RL   Mine-machi 350, Utsunomiya 321-8505, Japan
XX
RN   [2]
RX   DOI; 10.1111/j.1365-3059.2009.02174.x.
RX   AGRICOLA; IND44310597.
RA   Chikh Ali M., Maoka T., Natsuaki T., Natsuaki K.T.;
RT   "PVYNTN?NW, a novel recombinant strain of Potato virus Y predominating in
RT   potato fields in Syria";
RL   Plant Pathol. 59(1):31-41(2010).
XX
DR   MD5; feb429fc00227672ab846018e1f5a4e8.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1072
FT                   /organism="Potato virus Y"
FT                   /lab_host="Nicotiana tabacum cv. Samsun"
FT                   /isolate="SYR-I-15"
FT                   /mol_type="genomic RNA"
FT                   /country="Syria:Aleppo"
FT                   /collected_by="Mohamad Chikh Ali"
FT                   /collection_date="2002"
FT                   /identified_by="Mohamad Chikh Ali"
FT                   /db_xref="taxon:12216"
FT   5'UTR           <1..170
FT   CDS             171..>1072
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:D0FY86"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:D0FY86"
FT                   /protein_id="BAI48902.1"
FT                   /translation="MATYTSTIQFGSIECKLPYSPAPFGLVAGKREVSTTTDPFASLEM
FT                   QLSARLRRQEFATIRTSKNGTCMYRYKTDVQIARIQKKREEREREEYNFQMAASSVVSK
FT                   ITIAGGEPPSKLESQVRRGVIHTTPRMRTAKTYHTPKLTEGQMNHLIKQVKQIMSTKGG
FT                   SVQLISKKSTHVHYKEVLGSHRAVVCTAHMRGLRKRVDFRCDKWTVVRLQHLARTDKWT
FT                   NQVRATDLRKGDSGVILSNINLKGNFGRSSEGLFIVRGSHEGKIYDARSKVTQGVMDSM
FT                   VQFSSAESFWKGLDGNWAQ"
FT   mat_peptide     171..995
FT                   /gene="P1"
FT                   /product="P1 protein"
FT   mat_peptide     996..>1072
FT                   /gene="HC-Pro"
FT                   /product="helper component protein"
XX
SQ   Sequence 1072 BP; 344 A; 220 C; 244 G; 264 T; 0 other;
     caacataaga aaatcaacgc aaaaacactc acaaaagctt ccaactctaa ttcaaacaat        60
     ttgttaagtt tcaatttcga tcttcatcaa acaaactctt tcaatttcag tgtaagctat       120
     cgtaattcag taagttattt caaactctcg taaattgcag aagatcatcc atggcaactt       180
     acacatcaac aatccagttt ggttccattg aatgcaaact tccatactca cccgctcctt       240
     ttgggctagt tgcggggaaa cgagaagttt caaccaccac tgaccccttc gcgagtttgg       300
     agatgcagct tagtgcgcga ttacgaaggc aagagtttgc aactattcga acatccaaga       360
     atggtacttg catgtatcga tacaagactg atgtccagat tgcgcgcatt caaaagaagc       420
     gcgaggagag agaaagagag gaatataatt tccaaatggc tgcgtcaagt gttgtgtcga       480
     agatcactat tgctggtgga gagccacctt caaaacttga atcacaagtg cggaggggtg       540
     tcatccacac aactccaagg atgcgcacag caaaaacata tcacacgcca aagttgacag       600
     agggacaaat gaaccacctt atcaagcagg tgaagcaaat tatgtcaacc aaaggagggt       660
     ctgttcaact gattagcaag aaaagtaccc atgttcacta taaagaagtt ttgggatcac       720
     atcgcgcagt tgtttgcact gcacatatga gaggtttacg aaagagagtg gactttcggt       780
     gtgataaatg gaccgttgtg cgtctacagc atctcgccag gacagacaag tggactaacc       840
     aagttcgtgc tactgatcta cgcaagggcg atagtggagt tatattgagt aatattaatc       900
     tcaaaggaaa ctttggaaga agctcggagg gcctattcat agtgcgtggg tcgcacgaag       960
     gaaaaatcta tgatgcacgt tccaaggtta ctcaaggggt tatggattca atggttcagt      1020
     tctcaagcgc tgaaagcttt tggaagggat tggacggcaa ttgggcacaa at              1072
//