ID AB453906; SV 1; linear; genomic RNA; STD; VRL; 8613 BP. XX AC AB453906; XX DT 08-NOV-2008 (Rel. 97, Created) DT 16-APR-2009 (Rel. 100, Last updated, Version 3) XX DE Melon yellow spot virus RdRp gene for RNA dependent RNA polymerase, DE complete cds, strain: B07T. XX KW . XX OS Melon yellow spot virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Tospoviridae; unclassified Tospoviridae. XX RN [1] RP 1-8613 RA Takeuchi S., Shimomoto Y., Ishikawa K.; RT ; RL Submitted (15-AUG-2008) to the INSDC. RL Contact:Yoshifumi Shimomoto Kochi Agricultural Research Center; Hataeda RL 1100, Nankoku, Kochi 783-0023, Japan XX RN [2] RX DOI; 10.1007/s10327-009-0143-7. RX AGRICOLA; IND44183945. RA Takeuchi S., Shimomoto Y., Ishikawa K.; RT "First report of Melon yellow spot virus infecting balsam pear (Momordica RT charantia L.) in Japan"; RL J. Gen. Plant Pathol. 75(2):154-156(2009). XX DR MD5; 28bdcd7eaef12013837a49b6aa5d2b38. XX FH Key Location/Qualifiers FH FT source 1..8613 FT /organism="Melon yellow spot virus" FT /segment="L" FT /host="Momordica charantia (balsam pear)" FT /strain="B07T" FT /mol_type="genomic RNA" FT /country="Japan:Kochi" FT /db_xref="taxon:89471" FT CDS complement(1..8613) FT /codon_start=1 FT /transl_table=1 FT /gene="RdRp" FT /product="RNA dependent RNA polymerase" FT /db_xref="GOA:B6F1V2" FT /db_xref="InterPro:IPR007099" FT /db_xref="InterPro:IPR007322" FT /db_xref="InterPro:IPR015841" FT /db_xref="UniProtKB/TrEMBL:B6F1V2" FT /protein_id="BAG82842.1" FT /translation="MNIQTINSFLDISGEATVYLKNIKDELLRMSNTVQKKFSDGNETI FT EAGLNSIMSMSHILDKIEEMKSSYHQSTSSIDQKEMGDQISLFLDKYKELELMRHDLFG FT VLASTRLHFAPKYRHDVYLKECIVDYLEYCHKKTSIRNTITDLDNLLETLVFQHLTPDN FT YTIYKETNGERACLMIYDWKVSVDTMTESKTSENYYTSVWRTFKDIKIDDEPFLERHPI FT FITIVILNPTGPMNITVTTCRVVQDFKQSPYKTFPERKKAANLSKLISVNTLRQITGHA FT SECFNRFYAETQTFKNLLLSRVGDYMNRSNEVFFSHWSHEYKKTNLSNNQMSKDVIDII FT NSLKNPKICKELIINFIFGNYVLFRNTMSDLHSKDRFEGYKSHCEMFGVVPAGNEEELK FT DYLEANDDLLSELYDDHLKKIKKDVVSKKEKEVQIESIEDAFNINAEDYAKEYPGCFTN FT DLQETKTNFSICWSPSTDDLIMDEMNYNNAIIDSFRKSFLEEFRLIFNKPYNGVAADHH FT FGNSLFDLVKTCLVDLSTDTTGQDKITLEDVVDVKDGSIQVQRPEKSKIWKNVNGVTTR FT NGNEFSISQSTSNTAKKLFFKGLTLMNIGMGKKKKADCKDELKSKLQQIKLTKEAEGGE FT YDISKSETILNTSLKAVTHQKKLIRHDNPDVDYYCKSMIESMYVLHGLDSRKKNEGKIS FT SVYNEYCKNPEEIFTKGNLIETETTISKNIHAVASELSVYSYSEDMMQIAKGLMVADRF FT MKKTDFKILTCANTSMICLAFKGDGINTGKSGVPYITLHKVEKEIQPYFASLYTKELVV FT SFLVDGYYVNIMRPQRLNQVRLLSLFKAPSKVPVLFSQYSLLSSEIKSWLNKPSVNIFE FT CPENKIHNMQKILFSSVIIGTVTKLSRMGIFDFMRYAGFLPLSDYSNIKEYIAEKFDPD FT ITNVVDCFFVAGIKNLLLKMEEINLSNSIKPLTIDQENDMSGGINDLNITCPITGSTLK FT TIECLYNNVYLAIYMMPKSLHTHVHNLTTLLSVPAEWEIKFRERMGFKINEEIVPKEDM FT FNDSGPFSINGVLNIKTLFDYYRKNIDNVASCRSNIEDKEDFLSVPYKIKTLTSSKKCS FT KSDIIKNSEIATALKDVYGKDPSTIKGNNLYILKGVLKCFSEDRESVQTFLEVENMNVK FT NYVHFFANILSGDDKVTMKTSSEKFYYKSHPLTVESYMKVRYGHLKTTTVLKSKKVSEE FT LYDLIKEFNKIMEIDLESLEKLGRGLDGNRTTFMQLLEFIMLKTRANAGNTNFLVSVFE FT KMQRTKMDREIYLMSMKTKMMLYFIEHTYKHIAQSDPSEAISISGDYKIKNLASLSYDT FT ITNYNTSLQKNLECKMAFLSADQSKWSASDLTYKYILAVLMNPVLTTGEINLMCECILM FT YIKLKRVCIPTDIFLNLKRGQKEYGSYGTALSVLTDNLETNTFPVSMNWLQGNLNYLSS FT VYHSCAMLGYEKAMKRNKDYDFTIRWMVHSDDNATSIVARGDIKSLLQSFKCNSMSELL FT FRTIQSHFKSYCITLNPKKSYASESEVEFISERIINGAVIPLYCRHLANCSTESSHNSY FT FDDLMSLSTHVTMLLRKGCPNELISFAYSAIQVQSLSIYSMLPGEVNDINSIIKDIEFP FT LSKKEIPTCAGGWMHAPVELMSILGPSSNDQLIYYKIILEFFDLKDFSTLKKNIDSLGY FT VTYRINDLFKRINNNNLTSADRKMICMVNLFKTSLMSEDCDSLSIGMKFQSMITQIIKL FT PSFVSESSLMKNSSFQDFCKIFPNLRKNSEILDGLNYTTADEMDMDEMSESKFLSSLQL FT DELSKHMATHPEAYLISPMNDKDYILTNLYAYSSVSKRNQMSNQSTEKLALDRILRSKA FT KTFLDPDLKEMVTYRENMLLKMKQIVSTEGNDFKIINTISKLMVRDMNFEMIISLMENV FT VANASIPKANYNFRWFITEKVPSVIEGSPGLIVMSAVYGMDYLVNLGLKKLPLTETSIS FT ILHDIFGAKKTFDDVKNCLSGGSDEMKTDEFRISSKLKQTVMSINYMIQSQNKLLSINT FT CFSRKNFPFYSKYNLGKTFITNVLAIWSTIYSRLTNINFYTNLNFVIDRSSRLIVSLQR FT DMNLEKLIDCCAYVSDRLQSLFPDITVEAIQEILNRLNFNGVDLIRKMKSEINEVKRAI FT NNIKTSSHVTLSFRPQMIAMSRHAAWLYNFGYINEKEFKFVIDQIRQSEVHYIKTDEQD FT VRGYYVSGHSYKIGIKTRYNYVQLAMTNQDIQIQLHSPYEYKREEDGKIWEVHVKSIYK FT LLQKLLSDKQSVLKTFLSIRGDLLPNEFCIHESSNRTLLILMNDTSKPMKIERMKFKGS FT VNYLYTSDFSWDLMDNQSKYQLRKALTGECYSELYKTIDDSDEFVKVILSNLKQSLECG FT EEMDSIVEKVLDGIDDEESIDLIKNSVEQIHDVAIRGLTECKTSEEFENYLRDEEFQDL FT VDFQVSLLQQIIDEKHGIDGRIEKAVQQLTSWTNSLSRFKDICTMLKFSMVNDSKGIRT FT YKATGSDFNSLSASEIMTSNGYDLFEMLKLIKACEACHSSNSILNLMAFKNIKNKRFIP FT SHRRFRSHTVHFDFHLILNNEVMSNFYEYKTVSLQDVKISNHVKEVMSNHGFTITGHVM FT KLDESGLELNPVEIVDDSSTYDKVSKQMRVTKKKSAHLIPANTLLLGELMKFLMLCVNG FT EEHDIMKLLRSHFEMRPFRENRLLSIQDAIMTCKISGCVQQHFLNDKKEILLLGVADSL FT ENFINLAIPDHPFLEPFKADLLVRKALNEKDANRKYEILENIRNCMTSDVDFLTEKCLY FT SNSTNEEINALIFNAVSKIDSEMSSLRPKNRNDKQRLYNLFKEYAEAGSSQS" XX SQ Sequence 8613 BP; 2497 A; 1632 C; 1375 G; 3109 T; 0 other; tcaactttga ctagatcctg cttcagcata ctctttaaat aaattgtaca atctttgttt 60 atcatttctg tttttgggtc gcaaagatga catttctgaa tctatcttgc taacagcatt 120 aaaaatcaat gcattgattt cttcattagt tgagttagaa tataggcatt tctctgttaa 180 gaaatctaca tctgatgtca tgcagtttct gatattttct aagatttcat attttctatt 240 ggcatccttc tcatttagag ccttacgcac taagaggtct gctttaaacg gctccaaaaa 300 ggggtgatct ggaatagcaa gattaatgaa attttcaagg ctgtctgcaa cccctaaaag 360 aagtatctct tttttatcat ttaaaaaatg ctgttggaca caaccactaa tcttgcaagt 420 cattattgca tcttgtatgc ttaataacct attttcccta aaaggcctca tttcaaaatg 480 acttctgagc aatttcataa tatcatgttc ttcaccgttg acacaaagca ttaaaaattt 540 catgagttct cccagaagta aagtgtttgc aggtatcaaa tgagcgcttt ttttctttgt 600 cactctcatc tgtttagaaa ctttatcata tgtggaagaa tcatcaacta tttccactgg 660 gtttaattcc agcccacttt catctaattt cataacatgt cctgtgatag tgaatccatg 720 gttgctcata acttccttga cgtggttgga tatctttaca tcttgtaatg aaacagtttt 780 atattcataa aaattgctca tgacttcgtt attcagtatt aaatggaagt caaaatggac 840 tgtatgagat ctaaacctcc tgtggctggg tatgaacctt ttgtttttga tgtttttaaa 900 tgccattaaa ttcaaaatag aattgctcga atggcaagct tcacatgctt ttatcaactt 960 caacatttca aacagatcat aaccatttga cgtcatgatt tcactagcag atagagaatt 1020 aaaatcggac ccagtagctt tatatgttct aattccttta gagtcattaa ccatggagaa 1080 tttcaacatt gtgcaaatat ccttgaatct tgacaaactg ttggtccaac ttgtgagttg 1140 ctgcactgct ttctcaattc taccatctat accatgtttt tcatcgatga tttgctggag 1200 gagactgacc tgaaagtcaa caagatcttg gaactcttcg tccctcaaat agttctcaaa 1260 ctcttcagat gttttgcatt cggttaagcc tctgattgct acatcatgga tttgctcaac 1320 agaattcttt atcaaatcaa tgctttcctc atcatcaatc ccatccaaca ccttttccac 1380 tatactatcc atttcttctc cacactccaa gctttgtttt aaattgctta aaatcacttt 1440 cacaaattca tcactgtcat ctatagtttt ataaagctca ctataacatt ctcctgtcaa 1500 agcttttctc agttggtatt ttgactgatt atccattaaa tcccaagaaa aatctgatgt 1560 gtaaaggtag ttgacactgc ctttgaactt cattctctct attttcattg gttttgatgt 1620 atcattcatt aatattaata gtgtcctgtt ggagctttcg tggatgcaga actcattggg 1680 caatagatcg cctcttatgc taagaaaggt tttcaaaaca ctttgtttat cagacaaaag 1740 tttctgcagc agcttgtaaa tagacttaac atgaacttcc cagattttcc catcctcttc 1800 tctcttgtac tcataaggtg aatgcaattg aatttgtatg tcttggttgg tcatggccaa 1860 ttgaacataa ttgtatctgg tttttatacc tattttatat gaatgacctg aaacatagta 1920 tccccggaca tcttgctcat cagtcttaat gtagtgcact tcactttgtc ttatttgatc 1980 tatgacaaac ttaaattctt tttcgttgat gtaaccgaag ttataaagcc atgctgcatg 2040 acggctcata gctatcattt gaggcctaaa agacagtgtg acatggctag atgtttttat 2100 attattaata gctcttttca cctcattgat ttctgatttc attttcctga ttaggtctac 2160 cccattgaag ttcagtctat taagtatctc ttgtatagct tccactgtaa tatccgggaa 2220 taaactctgt agtctgtccg aaacataagc acaacaatct ataagcttct ccaaattcat 2280 gtctctttgc aaggatacaa tcaacctgga actcctatct ataacaaaat tcaagttagt 2340 gtagaaatta atattggtca acctactgta tatagtactc catatagcca atacattagt 2400 tataaatgtt ttccccaagt tatactttga ataaaacggg aagttcttcc tagagaagca 2460 agtgttgatg gataagagtt tgttctgtga ctggatcatg tagttgatgc tcattacagt 2520 ctgtttcaac ttggatgaga ttctgaactc atcagttttc atttcatcag accctccact 2580 aaggcagttt tttacatcat caaatgtttt cttagctcca aatatgtcat gtaggattga 2640 tatggatgtt tcagtcagcg gaagcttctt taagcccaga ttgactaaat aatccatccc 2700 gtagactgca gacatgacaa tcagcccagg tgaaccttct ataacactgg gaactttctc 2760 tgttatgaac catctaaagt tatagttagc tttgggtata gaggcattag ctaccacatt 2820 ttccattaaa gaaatgatca tttcaaagtt catatctctg accattagct tagagatggt 2880 gttaattatc ttgaaatcat taccttctgt gctcacgatt tgcttcattt tcaacaacat 2940 gttttctcta tacgtaacca tctctttcaa atcaggatca aggaaagtct tagctttaga 3000 tcttaagatc ctgtctaaag ctaatttttc cgttgattgg tttgacattt gattcctttt 3060 actaacacta ctgtaagcat ataaatttgt taaaatgtag tctttatcgt tcatggggga 3120 gatcaaatat gcttcagggt gggttgccat gtgcttactt aactcatcta attgcagaga 3180 cgataagaac tttgactcac tcatctcatc catatccatt tcatcagcag ttgtataatt 3240 gagtccatcc aatatctcag aatttttcct gaggtttggg aaaatcttac aaaaatcttg 3300 gaagctagaa ttcttcatca atgagctttc actcacaaaa cttggcagtt taattatctg 3360 ggtgatcatg gattggaatt tcatccctat gcttaagctg tcacaatctt cagacatcaa 3420 actagtttta aataaattca ccatgcatat cattttcctg tcagctgagg tcagattatt 3480 gttattgatt cttttgaata aatcatttat tctatatgta acataaccta atgaatcaat 3540 gttctttttt aaggtgctaa agtccttcaa atcaaaaaac tctagaatga ttttgtagta 3600 aattaattga tcatttgatg atggacctag tatggacatc aattcaacag gtgcatgcat 3660 ccatccgcca gcacaagtag gtatttcttt cttacttaaa ggaaattcta tatctttgat 3720 tatagaattt atatcgttta cttctcctgg caacatagag taaatgctga gtgattgaac 3780 ctggattgct gaatatgcaa atgagatcaa ttcatttgga caaccttttc taagaagcat 3840 agttacgtgt gtggacaacg acattaggtc atcgaaatag ctattatgtg aactttccgt 3900 gctgcagttt gccaaatgac ggcaatacag tgggatgaca gcaccattaa taattctttc 3960 tgagataaac tccacctcag attctgaagc ataactcttt ttaggattta atgtaataca 4020 atagctttta aaatgggact gtattgttct aaatagtagc tctgacatgc tgttacattt 4080 aaaactttgc agtagacttt ttatatcacc tctagcaaca atcgatgttg cattgtcgtc 4140 tgagtgcacc atccacctaa tagtaaagtc ataatcttta ttcctcttca tggccttctc 4200 ataaccaagc atagcacagg aatggtaaac tgatgacaaa taattcaagt tcccttgcag 4260 ccagttcatg gatactggga atgtgttagt ctccagatta tctgtcagaa ctgataaggc 4320 cgttccatat gacccatact ctttttggcc acgtttcaga ttcaaaaaga tatctgttgg 4380 aatgcacact cgtttgagct taatgtacat taaaatgcat tcgcacatca aatttatctc 4440 tccagttgtc aatacagggt tcatgagaac agccagtatg tatttatatg ttaaatctga 4500 agcagaccat ttagactgat ctgcagaaag aaatgccatc ttacattcta aattcttctg 4560 gagtgatgtg ttataattgg tgatagtatc atatgataaa gaggccaaat ttttaatctt 4620 gtaatcacct gatattgaga tagcctcaga tggatcagat tgagctatat gcttgtatgt 4680 atgctcaatg aaatatagca tcattttagt cttcatgctc atcagataaa tctctctgtc 4740 catcttcgtt ctctgcatct tttcaaaaac agaaacaagg aagttagtat ttccagcatt 4800 tgctctagtt ttaagcatta tgaactctaa aagttgcatg aacgttgttc tatttccatc 4860 tagacctctt ccaagctttt ctaaggactc cagatctatc tccatgattt tgttgaattc 4920 tttgataaga tcatataatt cctcgcttac tttctttgac ttcaagactg tagttgtttt 4980 tagatggcca tatctaactt tcatgtatga ctccacagta agaggatggc tcttataata 5040 gaacttctct gaacttgttt tcatggtgac tttatcatcc ccagatagta tattagcaaa 5100 aaaatgtaca tagtttttga cattcatgtt ttccacttct aagaatgtct gaacggattc 5160 tctatcttca ctgaagcatt ttaaaactcc tttaagaata tacaaattat tcccttttat 5220 tgtgcttggg tctttgccgt agacatcttt caaagctgtt gctatctcag agttttttat 5280 aatgtctgat ttagagcatt tcttggacga tgttagggtt tttatcttat atggaacaga 5340 caagaaatct tctttgtctt cgatgtttga ccggcaacta gcaacattgt ctatattctt 5400 tctgtagtag tcaaaaagtg ttttaatgtt taaaacacca tttatagaga atggaccaga 5460 atcattgaac atgtcttctt taggtacaat ctcttcattt atcttgaatc ccattctttc 5520 tctgaacttt atttcccact ctgcaggcac actcaacaac gttgttaaat tgtggacatg 5580 agtgtgcaaa gatttaggca tcatgtagat tgccaagtat acattgttgt aaaggcactc 5640 tattgtcttg agggtagagc ctgttatagg gcaagttata ttcaagtcat ttatacctcc 5700 tgacatgtca ttttcttgat ctatagtcaa cggtttgatg ctgttactca aatttatttc 5760 ctccatcttt agaaggaggt tttttattcc tgcaacaaaa aagcaatcaa caacatttgt 5820 tatgtcaggg tcaaattttt ctgctatgta ttcttttatg tttgagtagt cagataaagg 5880 gagaaaccca gcatacctca tgaaatcaaa gatacccata cgactcaatt ttgtgactgt 5940 acctatgatc acagaagaaa ataaaatttt ctgcatatta tgaatcttgt tttctgggca 6000 ttcaaatata tttacagatg gcttattcag ccatgattta atttcactgc ttaaaagaga 6060 gtactgagaa aatagaacag ggactttgct tggtgctttg aagaggctca acagcctgac 6120 ttggtttagt ctctgaggtc tcattatatt tacgtaatat ccatcaacta agaaagaaac 6180 caccagttct ttagtgtaca atgatgcaaa atatggctga atctcttttt ccaccttgtg 6240 cagtgttata taagggactc ctgacttccc tgtatttatc ccatcaccct taaatgctaa 6300 acagatcatg cttgtgttag cacaagtgag tattttgaaa tctgtcttct tcataaacct 6360 atcagcaacc atgaggcctt tagcaatctg catcatgtct tcactgtaag aataaactga 6420 taattctgat gcaacggcat gaatattttt agatatagtt gtttctgtct cgatgagatt 6480 ccctttagta aaaatctcct ctggattctt acagtattca ttgtagacag agctaatttt 6540 cccttcattc tttttcctac tgtctaaacc gtgaagcaca tacatggatt ctatcatgga 6600 tttgcaataa taatcaacgt ctggattatc atgtctgatt aacttttttt ggtgtgtaac 6660 agctttcaag ctggtattga gtattgtttc acttttagag atgtcatatt cccctccttc 6720 agcctcttta gtgagcttaa tctgttgcaa cttgctcttt aattcatctt tgcaatcagc 6780 tttctttttc tttcccatgc caatattcat tagagtcagt cccttaaaga ataatttctt 6840 tgctgtgtta gacgttgact gagagattga aaactcattc ccattccttg tagttacacc 6900 atttacattc ttccaaatct tagatttttc tggtctttgg acctgtatgc ttccatcctt 6960 tacatcaacc acatcctcta atgtgatctt gtcctgaccc gtggtatctg tgctcaagtc 7020 aactaaacat gttttgacca aatcaaagag agagtttcca aaatgatgat ccgcagctac 7080 accattataa ggcttgttga atatcagacg gaactcttct aaaaaagact ttctgaagga 7140 gtcaatgatg gcattgttgt agttcatttc atccattatt agatcatctg tcgatggtga 7200 ccagcaaatg gaaaaatttg tttttgtctc ttgaagatca tttgtaaaac acccaggata 7260 ttcttttgca taatcttcag catttatgtt aaaagcatct tcaatgcttt ctatttgcac 7320 ttctttttct tttttagata ccacgtcttt ctttatcttc ttcaagtggt catcataaag 7380 ctcagatagc aagtcatcat tggcttctag ataatctttc aattcttctt catttcccgc 7440 aggaaccact ccaaacattt cacaatggct tttatatcct tcaaatctat cttttgaatg 7500 gagatcactc attgtatttc taaataaaac ataattgccg aaaataaagt tgataatcaa 7560 ttctttacag attttcggat tttttaatga atttataata tctatcacat cttttgacat 7620 ttgattgttt gataaattgg ttttcttgta ctcatgagac cagtggctga aaaagacttc 7680 attagatcga ttcatatagt cacctactct ggacagcaat aaattcttga aagtttgagt 7740 ttctgcataa aatcgattga agcactctga agcatggcct gttatttgcc ttaatgtgtt 7800 aactgaaata agtttagaca aatttgcagc ttttttcctt tcagggaatg tcttgtatgg 7860 tgactgcttg aaatcctgaa ccactctaca agtggttaca gtgatgttca tgggaccagt 7920 tgggtttaat ataactattg tgataaaaat tggatgcctt tccaaaaacg gttcgtcatc 7980 tattttgatg tctttaaatg ttctccaaac acttgtgtaa taattttctg atgtctttga 8040 ttctgtcatt gtatctacag acactttcca atcataaatc atcaagcagg ctctttcacc 8100 attagtctcc ttatatattg tataattgtc tggagtcaga tgttggaaaa ccaaagtttc 8160 caaaaggttg tcaagatctg ttatggtatt tcttatagat gtctttttat ggcagtattc 8220 tagataatct acaatgcact ctttaaggta aacatcatgt ctatacttag gggcaaaatg 8280 aagcctggta cttgccagaa ctccaaaaag gtcatggcgc atgagctcta attctttata 8340 tttatccaga aacagagata tttgatcacc catttctttt tgatcgatcg aagatgtgct 8400 ctggtgatat gaagatttca tttcttctat cttatccaag atatggctca ttgacattat 8460 tgaatttaat cctgcttcta tggtctcatt accatcagag aatttctttt gtacagtgtt 8520 tgacattcgc agaagttcat ctttaatatt ctttaaatag acagtagctt ctcctgaaat 8580 atctaggaaa ctgtttatcg tttgaatgtt cat 8613 //