ID AB439842; SV 1; linear; genomic DNA; STD; VRL; 2787 BP. XX AC AB439842; XX DT 06-AUG-2008 (Rel. 96, Created) DT 25-SEP-2009 (Rel. 102, Last updated, Version 2) XX DE Tomato yellow leaf curl virus-Mild[Tokai] DNA, complete genome. XX KW . XX OS Tomato yellow leaf curl virus - Mild[Tokai] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2787 RA Kimbara J., Hosoi K., Ito T., Ikegami M.; RT ; RL Submitted (05-JUN-2008) to the INSDC. RL Contact:Junji Kimbara Research Institute, Kagome Co.,Ltd., Plant Breeding RL Group, Agricultural Department; 17, Nishitomiyama, Nasushiobara-shi, RL Tochigi 329-2762, Japan XX RN [2] RX DOI; 10.1007/s00705-009-0431-8. RX PUBMED; 19575277. RA Ito T., Kimbara J., Sharma P., Ikegami M.; RT "Interaction of tomato yellow leaf curl virus with diverse betasatellites RT enhances symptom severity"; RL Arch. Virol. 154(8):1233-1239(2009). XX DR MD5; fdc00b1ff95101db7b58ab8a7c6a4860. XX FH Key Location/Qualifiers FH FT source 1..2787 FT /organism="Tomato yellow leaf curl virus - Mild[Tokai]" FT /mol_type="genomic DNA" FT /country="Japan:Aichi, Tokai" FT /note="Mild type" FT /db_xref="taxon:537882" FT CDS 144..494 FT /codon_start=1 FT /transl_table=1 FT /gene="V2" FT /product="V2 protein" FT /db_xref="GOA:B3Y5D0" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:B3Y5D0" FT /protein_id="BAG68383.1" FT /translation="MWDPLLNEFPESVHGFRCMLAIKYLQSVEETYEPNTLGHDLIRDL FT ISVVRARDYVEATRRYNHFHARLEGSPKAELRQPIQQPCCCPHCPRHKQATIMDVQAHV FT PEAQNIQNVSKP" FT CDS 304..1080 FT /codon_start=1 FT /transl_table=1 FT /gene="V1" FT /product="V1 protein" FT /db_xref="GOA:B3Y5D1" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:B3Y5D1" FT /protein_id="BAG68384.1" FT /translation="MSKRPGDIIISTPASKVRRRLNFDSPYSSRAAVPIVQGTNKRRSW FT TYRPMYRKPRIYRMYRSPDVPRGCEGPCKVQSYEQRDDIKHTGIVRCVSDVTRGSGITH FT RVGKRFCVKSIYFLGKVWMDENIKKQNHTNQVMFFLVRDRRPYGNSPMDFGQVFNMFDN FT EPSTATVKNDLRDRFQVMRKFHATVIGGPSGMKEQALVKRFFRINSHVTYNHQEAAKYE FT NHTENALLLYMACTHASNPVYATMKIRIYFYDSISN" FT CDS complement(1077..1481) FT /codon_start=1 FT /transl_table=1 FT /gene="C3" FT /product="C3 protein" FT /db_xref="GOA:B3Y5D2" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:B3Y5D2" FT /protein_id="BAG68385.1" FT /translation="MDSRTGELITAPQAENGVFIWEINNPLYFKITEHSQRPFLMNHDI FT ISIQIRFNHNIRKVLGIHKCFLNFRIWTTLQPQTGRFLRVFTHQVLKYLDSIGVISINN FT VIRAVDHVLYDVLEKTINVIETHDIKYKFY" FT CDS complement(1207..1629) FT /codon_start=1 FT /transl_table=1 FT /gene="C2" FT /product="C2 protein" FT /db_xref="GOA:B3Y5D3" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:B3Y5D3" FT /protein_id="BAG68386.1" FT /translation="MQPSSPSTSHCSQVSIKVQHKIAKKKPIRRKRVDLDCGCSYYLHL FT NCNNHGFTHRGTHHCSSSREWRFYLGDKQSPLFQDNRTQPEAISNEPRHHFHSDKIQPQ FT HQEGIGDSQMFSQLPNLDDITASDWSFLKSIYTSSS" FT CDS complement(1538..2617) FT /codon_start=1 FT /transl_table=1 FT /gene="C1" FT /product="C1 protein" FT /db_xref="GOA:B3Y5D4" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B3Y5D4" FT /protein_id="BAG68387.1" FT /translation="MAPPKRFQINCKNYFITYPKCSLTKEEALSQLKDLETPTNKKYIK FT VCRELHENGEPHLHVLIQFEGKFKCQNQRFFDLVSPSRAAHFHPNIQGAKSSSDVKSYV FT DKDGDTVDWGEFQIDGRSARGGQQSANDAYAAALNSGSKSEALRIIKELVPKDYILQFH FT NLNSNLDRIFQEPPAPYISPFLSSSFNQVPDELEVWVSENVVSSAARPWRPNSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYREYLDEEKNISLKNWALKNATFVTLYEPL FT FASINQGPTQDSQEETNKA" FT CDS complement(2158..2460) FT /codon_start=1 FT /transl_table=1 FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:B3Y5D5" FT /protein_id="BAG68388.1" FT /translation="MGNHISMCLSNLKGNSSAKISDSSTWYPQAGQHISIQTFRELNPV FT QTSSLMSIRTETPSTGVSFRSTDDLHVGVSSQPMTLTPQLLTQAVSQRLLESLKN" XX SQ Sequence 2787 BP; 765 A; 543 C; 606 G; 873 T; 0 other; accggatggc cgcgccttta actttatgcc cggtccccac gagggttcca ctgtctatta 60 accaatcaaa ttgcatcctc aaacgttaga taagtgttca tttgtcttta tatacttggt 120 ccccaagtat tttgtcttgc aatatgtggg atccacttct aaatgaattt cctgaatctg 180 ttcacggatt tcgttgtatg ttagctatta aatatttgca gtccgttgag gaaacttacg 240 agcccaatac attgggccac gatttaatta gggatcttat atctgttgta agggcccgtg 300 actatgtcga agcgaccagg cgatataatc atttccacgc ccgcctcgaa ggttcgccga 360 aggctgaact tcgacagccc atacagcagc cgtgctgctg tccccattgt ccaaggcaca 420 aacaagcgac gatcatggac gtacaggccc atgtaccgga agcccagaat atacagaatg 480 tatcgaagcc ctgatgttcc ccgtggatgt gaaggcccat gtaaagtaca gtcttatgag 540 caacgggatg atattaagca tactggtatt gttcgttgtg ttagtgatgt tactcgtgga 600 tctggaatta ctcacagagt gggtaagagg ttctgtgtta aatcgatata ttttttaggt 660 aaagtctgga tggatgaaaa tatcaagaag cagaatcaca ctaatcaggt catgttcttc 720 ttggtccgtg atagaaggcc ctatggaaac agcccaatgg attttggaca ggtttttaat 780 atgttcgata atgagcccag taccgcaaca gtgaagaatg atttgcggga taggtttcaa 840 gtgatgagga aatttcatgc tacagttatt ggtgggccct ctggaatgaa ggaacaggca 900 ttagttaaga gattttttag aattaacagt catgtaactt ataatcatca ggaggcagcc 960 aagtacgaga accatactga aaacgccttg ttattgtata tggcatgtac gcatgcctct 1020 aatccagtgt atgcaactat gaaaatacgc atctatttct atgattcaat atcaaattaa 1080 taaaatttat attttatatc atgagtttct attacattta ttgtcttttc aagtacatca 1140 tacaatacat gatcaactgc tctgattaca ttgttaattg aaattacacc aatactatct 1200 aaatacttaa gaacttgatg tgtaaatact cttaagaaac gaccagtctg aggctgtaat 1260 gtcgtccaaa ttcggaagtt gagaaaacat ttgtgaatcc ccaatacctt cctgatgttg 1320 tggttgaatc ttatctgaat ggaaatgatg tcgtggttca ttagaaatgg cctctggctg 1380 tgttctgtta tcttgaaata gaggggattg tttatctccc aaataaaaac gccattctct 1440 gcttgaggag cagtgatgag ttcccctgtg cgtgaatcca tgattgttgc agttgaggtg 1500 gaggtagtat gagcagccac agtctaggtc tacacgctta cgccttattg gtttcttctt 1560 ggctatcttg tgttggacct tgattgatac ttgcgaacag tggctcgtag agggtgacga 1620 aggttgcatt cttgagagcc caatttttca aggatatgtt tttttcttcg tctagatatt 1680 ccctatatga ggaggtaggt cctggattgc agaggaagat agtgggaatt ccccctttaa 1740 tttgaatggg cttcccgtac tttgtgttgc tttgccagtc cctctgggcc cccatgaatt 1800 ccttgaagtg ctttaaataa tgcgggtcta cgtcatcaat gacgttgtac cacgcatcat 1860 tactgtacac ctttggactt aggtctagat gtccacataa ataattatgt gggcctagag 1920 acctggccca cattgttttg cctgttctgc tatcaccctc aatgacaata ctattaggcc 1980 tccatggccg cgcagcggaa gacacgacgt tctcggacac ccatacttca agttcatctg 2040 gaacttgatt aaaagatgaa gataaaaagg gagaaatata aggagccgga ggctcctgaa 2100 aaattctatc taaattacta tttaaattat gaaattgtaa aatataatct tttggtacta 2160 attctttaat gattctaaga gcctctgact tactgcctga gttaagagct gcggcgtaag 2220 cgtcattggc tgactgctga cccccacgtg cagatcgtcc gtcgatctga aactcacccc 2280 agtcgacggt gtctccgtcc ttatcgacat aagacttgac gtctgaactg gatttagctc 2340 cctgaatgtt tggatggaaa tgtgctgccc tgcttgggga taccaggtcg aagaatcgct 2400 gattttggca cttgaatttc ccttcaaatt ggataagcac atggagatgt ggttccccat 2460 tctcgtggag ttctctgcaa actttgatgt attttttatt tgttggggtt tctaggtctt 2520 ttaattggga aagtgcttct tctttcgtta aggagcactt aggatatgtg atgaaataat 2580 ttttgcaatt tatttggaag cgcttagggg gagccatatg gtcaatgagt accgattgac 2640 caagattttt acacttatcc ctggtacatc ggtactcaat atatagtgag taccaaatgg 2700 cattttggta attttgtaaa agtacattgc aatttaaaat tcaaaattca aaaatcaaat 2760 cattaaagcg gccatccgta taatatt 2787 //