ID AB430769; SV 1; linear; genomic RNA; STD; VRL; 7642 BP. XX AC AB430769; XX DT 06-SEP-2008 (Rel. 97, Created) DT 30-JAN-2009 (Rel. 99, Last updated, Version 2) XX DE Barley yellow mosaic virus genomic RNA, segment RNA1, complete sequence, DE strain: BaYMV-IV. XX KW . XX OS Barley yellow mosaic virus OC Viruses; Riboviria; Potyviridae; Bymovirus. XX RN [1] RP 1-7642 RA Nishigawa H., Natsuaki T.; RT ; RL Submitted (28-MAR-2008) to the INSDC. RL Contact:Hisashi Nishigawa Utsunomiya University, Center for Bioscience RL Research & Education; Mine-machi 350, Utsunomiya, Tochigi 321-8505, Japan XX RN [2] RX DOI; 10.1007/s00705-008-0163-1. RX PUBMED; 18636220. RA Nishigawa H., Hagiwara T., Yumoto M., Sotome T., Kato T., Natsuaki T.; RT "Molecular phylogenetic analysis of Barley yellow mosaic virus"; RL Arch. Virol. 153(9):1783-1786(2008). XX DR MD5; cbe229918b541f1289773cc2b8d6eb76. XX FH Key Location/Qualifiers FH FT source 1..7642 FT /organism="Barley yellow mosaic virus" FT /segment="RNA1" FT /strain="BaYMV-IV" FT /mol_type="genomic RNA" FT /country="Japan:Tochigi" FT /isolation_source="Barley cv. Sachiho Golden" FT /db_xref="taxon:12465" FT CDS 172..7410 FT /codon_start=1 FT /transl_table=1 FT /product="polyprotein" FT /db_xref="GOA:B5BSW5" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001592" FT /db_xref="InterPro:IPR001650" FT /db_xref="InterPro:IPR001730" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="InterPro:IPR013648" FT /db_xref="InterPro:IPR014001" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:B5BSW5" FT /protein_id="BAG70353.1" FT /translation="MEQTLAQAVSRKSKTDTPMAEERKHFSPMNFSANFVAPELFYSAN FT VRKIKNIFRERSTTRFLDAISSDFELVAFLTLSPAHLMQLETVLRQEMRSCAVPIVTSD FT ASFETVAVIKTALDGMRFHFGYTTLEKGWISMMRHAESCLQESSSSAVNDLQTQIKRVG FT SLLLSGKNRVEGCELSVLNLTARRFRIEYGLNGTYFGEHVAMLRDLKRYIYGTVPKEFL FT WAKTKKHSPFTIPTWIKRTPIDCFLFCLRVIPILHRCGVAVSLIYWSCVAALNFPAFMS FT FLFKRQFAKYVAHSFAKHSIYFMFLTIVAILWSFRTFTSQKPKIVLQARSTAEKEKKLM FT MILASVVGITYLFDYDIAEALGNSLHKISRLSSYLLDDHQGIASRMFGASYGLQAGDSA FT EDAVTTIISDLLSVTFKIVDEDASQGTVEDASETTFHSWVGVNTLAGRNMSRPLQYSVN FT HTYALTPQNVQLQARAMVDANNCWSMVVGHTGSGKSTYLPVQYSNYLSTKSDRRQQILI FT CEPTQAATENVCAGVAANLGRAVYGRHEGWSRMGDHCIQVMTYGSALQCHAMDPSFIST FT FDAIFLDEAHDVKEHSLVFESICDTFKSVRKFYVSATPRDGSVCPEAARKYPLHVETSV FT CDSYRKFIAAQGGGDLLDISKHDTALVFLAGRPECIKAANAWNASVTGEKRAFSLSSDN FT FATDFSMLTERLKTQKTIIFTTNIIETGVTLSVDCVVDFGHTMRPCLDLNQKSLRLDRR FT RVTRNERQQRIGRAGRLKDGYAIVCGDVDRAVNVISPDVLYGAALLSFKHNVPFYMNET FT FESSWLEGVTKAQADTMTIFKLPIFLTRDLINADGSVAKEFLDVLKKHQFTTSDIKQAP FT SVTAKHIFPTWASYFSLHQALHYGDDKDEIPHELRYARVPFSVTTLSKFDWPALALACE FT KHRASMSNVFAGIEEPARVVTLQTNPANIQASITHLTHMSKNYKTLIENNQHVRQSMMT FT NVMYKWFSSTRITKDLDRNLRRCTDNLAVVEATLSSLRQILAGNTQVHATPHMQSTLED FT IIGLQASDTLTEESLASALGIFVPKSNLFLLLATKGFKLVYVVCILLLVNLVYIGLRKW FT REHLKQKGSDEILTNTMPVSEGGEILAEVMKMEPKMRKNIKRDMDEAVESKLCGFTFVF FT PDDDKIGLEGKGNKYRPREDARLMYSTREDATFDAWNEKAKERRKKVTDRSEPELRRAY FT EKRPYFNFYDLQTDSNILEAIFYTIEGDEFFRTADPNKDMNLVADKLRSFLDTKLVVGH FT HQRQLLEETAEVIIKDTKGTTHYMDVSQHDPDYLKQNGSGKVGYPEHRGQFRQEGVART FT LDTDLAVEFGTETDDITLEASTGILLSQVGVDVATRVGRICIGTFNMNCYFYSDWILVP FT GHLQDRSGNVTIQFPDQTVQTTTDALNANGVKRFYGLDVIAIRRPAILRPRTKLVKAFA FT IEEPVIAQMVFVDAQGVRKFTQSDWARKEENSGRWSHKISTVLGMCGCPVLDVGKNRLI FT GIHVATNYTKKRNEFQPFTQEVVDFINGPGTKIPYCPWVFDRPACGYASHTALFEKPTT FT LTDIIHMQASDGLHNINNAIEGFGSSLKGQLVLPPTESTRQRFDKLFGSGSFELIGQMN FT KGLIDKHVIVGENDDVYDFMREHPTFTWLKDFMNEYAPSVLSYSAYYKDLCKYNRAKHV FT LTYNPEELHYATKGLIKMLEDAGLTQGSVRTPQQVISDIQWNTSAGPSYQGKKRDLCAH FT LSDDEVLHLAEVCRQQFLEGKSTGVWNGSLKAELRTIEKVEAEKTRVFTASPITSLFAM FT KFYVDDFNKKFYATNLKAPHTVGINKFGRGWERLHDKLNRPGWLHGSGDGSRFDSSIDP FT FFFDVVKTIRKHFLPSEHHKAIDLIYDEILNTTICLANGMVIKKNVGNNSGQPSTVVDN FT TLVLMTAFLYAYIHKTGDRELALLNERFIFVCNGDDNKFAISPQFDEEFGHDFSPELVE FT LGLTYEFDDITSDICENPYMSLTMVKTPFGVGFSLPVERIIAIMQWSKKGGVLHSYLAG FT ISAIYESFNTPKLFKSIYAYLLWLTEEHEAEILAAMTQSSTALPIPSMLDVYRLHYGDD FT EIWLQAADSLTEAQKEAAHIAAVDKARADLADVDRRRKVEADRVEAARVKKAADAALKP FT VNLTATRMPTEDDGKLKTPSGARIPSSAADGNWSVPATKQVNAGLTLKIPLNKLKSVPK FT SVMEHNNSVALESELKAWTDAVRTSLGITTDEAWIDALIPFIGWCCNNGTSDKHAENQV FT MQIDSGKGAVTEMSLSPFIVHARMNGGLRRIMRNYSDETVLLITNNKLVAHWSMKHGAS FT ANAKYAFDFFVPRSWMNPQDIEVSKQARLAALGTGTYNTMLTSDTTNLRKTTNHRVLDS FT DGHPELT" XX SQ Sequence 7642 BP; 2147 A; 1797 C; 1712 G; 1986 T; 0 other; aaaataaaac aaccctaaac caaaacaagc aaaacgaaac aaacacaaac agcacacgct 60 ccccaagctc accatactcg tagagtgacc ttcgtcatcc tactctttgt gagcttttcc 120 gcaaatcaac ccgcttgctt ttgcgccccc ttcaccttca ctctcgctcc tatggagcaa 180 accctagctc aagctgtgtc acggaaaagc aaaacagata cacctatggc agaagagcgg 240 aaacatttca gtcccatgaa tttttccgca aactttgttg ctcctgagct cttttatagt 300 gctaatgtga ggaaaatcaa aaatatcttc agagagcgca gcacaactcg gtttctggac 360 gcgatttcaa gtgactttga gcttgtcgct tttctcacct tgagtcctgc tcatctaatg 420 caacttgaaa cagttctgcg ccaagagatg cgttcgtgcg ctgtgccaat tgttacctct 480 gatgctagct ttgaaacagt tgctgtcatc aaaaccgctc tggatggcat gagattccac 540 tttggataca ctactcttga aaaggggtgg atatctatga tgcgccatgc ggagagttgc 600 ctgcaagaga gctcttcttc ggctgtgaat gatctgcaga cgcaaattaa acgtgttgga 660 tcgctgctcc tgagtggaaa aaatcgcgta gaaggctgcg aactatctgt cttgaacctc 720 accgcgcgac gtttcaggat cgaatatggg ctaaatggta catactttgg cgaacatgtt 780 gctatgctac gcgacttaaa acgttatatc tatggtaccg taccaaaaga gtttttgtgg 840 gcgaaaacca aaaagcactc accattcaca atccccacgt ggatcaagcg tacgcccatc 900 gattgtttct tgttctgtct tcgcgttatc cctatcttac ataggtgtgg tgttgccgtg 960 tcacttattt actggtcgtg tgttgccgct ttaaattttc ctgcttttat gtctttctta 1020 tttaagcgtc agttcgctaa gtatgttgct cactcctttg ctaaacactc catctacttt 1080 atgtttttaa ctatagttgc tattttatgg tcttttcgca cttttacttc tcaaaaacca 1140 aaaatagtgc ttcaggctag aagcacagca gaaaaagaga aaaagcttat gatgattcta 1200 gctagtgtcg ttgggatcac ttacctcttc gactacgaca tagcagaagc tcttgggaat 1260 tctctacata aaataagccg tctgtcctca tatcttctcg acgaccatca aggcattgca 1320 tcacgaatgt ttggagcaag ctacgggctt caagctggcg acagtgctga ggatgcagtc 1380 acaacgataa tcagcgactt actgtctgtt acttttaaaa ttgtggatga agacgcatca 1440 cagggcaccg tggaggacgc atctgagaca accttccaca gttgggttgg tgttaacaca 1500 ctcgcaggtc gcaacatgtc aagaccactc cagtatagcg tcaatcacac gtatgcactc 1560 acacctcaaa atgtccagct ccaggcgcga gctatggtag acgccaacaa ctgctggtca 1620 atggttgttg gtcacacagg atctggaaag tccacatact tgcctgtgca gtactccaac 1680 tacttatcca ctaagagtga taggcgacag caaattctta tctgcgagcc aactcaggct 1740 gccactgaga atgtttgcgc tggcgttgct gccaatctcg gcagagctgt ttatgggcgc 1800 catgagggtt ggtccagaat gggggatcat tgcattcaag ttatgacgta tggttctgcg 1860 ctccagtgtc acgctatgga ccctagcttc atatcaactt tcgacgcaat ctttcttgat 1920 gaagcacacg acgttaaaga gcactctcta gtctttgaga gcatttgtga cacattcaaa 1980 tccgttcgaa agttctatgt ttcagcaact cccagagatg gcagtgtttg tcctgaagca 2040 gctaggaaat atcctttaca tgttgaaact agcgtttgcg attcgtatcg gaagttcatt 2100 gcagctcaag gcgggggaga tttgttggac atctcaaaac atgacacagc tttagttttt 2160 ctggcgggac ggcccgagtg tattaaagct gctaatgcct ggaatgctag tgtcaccggt 2220 gagaagcgcg ccttttcctt gtcgagcgac aacttcgcta ctgacttctc aatgctaact 2280 gagaggctca aaacacagaa aaccatcatc ttcaccacga acataattga gacaggtgtt 2340 actctaagcg ttgactgtgt tgtggatttc ggccatacaa tgcgcccatg tttagatctc 2400 aatcaaaaat cattgcgtct tgatcgacgc agagtgacgc gaaacgaaag acagcagaga 2460 attgggcgag cgggtcggct caaagacgga tacgccatag tgtgtggaga tgttgatagg 2520 gctgtaaacg tcatctctcc tgatgttctt tatggtgctg ctctcctgag ttttaaacac 2580 aatgtgcctt tctacatgaa cgaaacattt gagagttcct ggttggaggg tgttacaaaa 2640 gcacaagcag acacgatgac aatctttaag cttcctatat ttctaacacg agatctcatc 2700 aacgcagatg gctcagttgc caaagagttt ctcgatgtcc taaagaagca tcaattcaca 2760 acaagcgaca taaagcaagc accaagtgtt acagccaaac acatcttccc aacttgggct 2820 tcatacttct ctctccacca agcacttcat tatggtgatg acaaggatga gataccacac 2880 gaattgcgat atgcgcgcgt tcccttttcc gtcacaactt tgagcaaatt cgattggcca 2940 gccttagctc ttgcatgtga gaaacataga gcttccatgt caaatgtgtt tgctggcatc 3000 gaggaacctg cgcgcgttgt cactctacaa acaaatcctg cgaacataca agcgagcatc 3060 acacatttaa cgcacatgag caagaactac aaaactctca ttgaaaataa tcagcacgtg 3120 cgccaatcca tgatgacaaa tgttatgtat aaatggttct cttccactcg tatcactaaa 3180 gatcttgata gaaacttgcg aagatgcacg gataatcttg cagttgtcga ggctacgctc 3240 agctcactta gacaaatctt agctggcaac acgcaggttc atgcaacgcc acacatgcag 3300 agcactcttg aggatattat tgggctccaa gctagcgata cacttacgga agagagctta 3360 gcaagtgcac ttggcatctt tgttccgaag agcaacctct ttctgctgct agctaccaaa 3420 ggttttaaac ttgtgtacgt tgtctgcatc ttacttcttg tgaaccttgt ttatattggt 3480 cttcgcaagt ggcgcgagca tcttaagcag aaaggaagcg atgaaatcct aactaacaca 3540 atgccagtta gcgaaggggg ggagattctc gctgaggtta tgaaaatgga gcctaaaatg 3600 agaaagaaca tcaagaggga tatggatgaa gccgttgaga gcaaactatg tggtttcacc 3660 tttgttttcc cagatgatga caaaattggt cttgaaggta agggaaacaa gtaccgccct 3720 cgcgaagacg ctcgtctcat gtactccacc agagaagacg ccacctttga cgcttggaat 3780 gagaaagcaa aggaaaggcg taagaaggtg accgacagat ccgagccaga gcttcggaga 3840 gcctatgaaa agagaccata cttcaatttc tacgaccttc aaacagatag caacattctg 3900 gaagctattt tctacaccat tgaaggcgat gagtttttcc gaacagcaga tcccaataag 3960 gacatgaact tggttgctga caaactacgc tcttttctcg acacaaagct tgttgttgga 4020 caccaccagc ggcagctact agaagaaaca gctgaggtta tcatcaaaga tacgaaggga 4080 actacgcact atatggatgt ttcacagcat gacccagact atctaaagca gaatgggtcc 4140 ggcaaagttg gatatccaga acaccggggg cagtttcggc aggaaggagt tgccagaaca 4200 ttggataccg atcttgcagt tgagtttggc accgaaaccg atgacatcac gcttgaagcc 4260 tctactggga tattattatc acaagttggg gttgacgtcg caacccgagt tggaagaatt 4320 tgcattggca ctttcaacat gaactgttac ttctacagcg actggattct ggttccggga 4380 cacctgcaag acagatccgg caacgtaaca attcaatttc ctgaccaaac agtgcaaacc 4440 acaactgatg cactcaacgc aaatggtgtg aaacgattct atggactaga tgtgatagca 4500 attcggcgcc ctgctatctt gagacctcgt accaagttgg tcaaagcttt tgctattgag 4560 gaaccagtca tcgcacaaat ggtctttgtt gatgcacagg gagttcgtaa gtttactcaa 4620 tctgattggg ccagaaagga ggagaattcc gggcgttggt cacacaagat ttccactgtt 4680 cttggcatgt gtggatgccc agttctggac gttgggaaga acagattgat aggaattcat 4740 gttgccacaa actacacaaa gaagcgcaac gagttccaac ccttcaccca ggaggtcgtc 4800 gatttcataa atggacctgg aacaaagatc ccctactgcc catgggtatt cgatagaccg 4860 gcttgtgggt atgcatccca cacagctttg ttcgagaaac caaccacact aactgacatc 4920 attcacatgc aggcttctga tggtttgcac aacattaaca atgccattga gggtttcggg 4980 agttcactga agggtcagct cgtgttacca cctactgaat ccaccaggca acgtttcgat 5040 aagctgtttg gtagtggcag ctttgagctc attgggcaaa tgaacaaagg cttaatcgac 5100 aagcacgtaa ttgttgggga aaatgatgat gtttatgact tcatgcgcga gcacccaaca 5160 tttacttggt tgaaagattt catgaatgag tatgcgccta gtgttttgtc ttactctgct 5220 tattacaaag acctttgcaa gtataatcgc gcaaaacacg tgctcactta caacccagaa 5280 gagctccatt atgcgacgaa aggactgatc aagatgttgg aagacgctgg cttgacacaa 5340 ggcagtgtga ggacacccca acaagtcatt tcggacattc aatggaacac ttccgctgga 5400 ccgagctatc aaggaaagaa acgcgacctc tgtgcccatt tgagtgatga tgaggtgctg 5460 catcttgctg aggtgtgtcg ccaacaattt ctcgagggca agtcaactgg agtgtggaat 5520 ggttctttga aagctgagtt gagaaccatc gagaaagttg aggcggagaa aacgcgtgtt 5580 ttcacagcct ctcccataac aagcttgttt gccatgaaat tctacgttga cgattttaac 5640 aagaagttct acgctaccaa tctgaaagcc ccccatactg ttggcatcaa taagtttggt 5700 aggggatggg aaagattgca tgataagctt aatcgccctg gatggttgca cggcagtgga 5760 gatggctcta ggttcgatag ctctatcgat cctttcttct tcgacgttgt gaaaactatt 5820 cgcaagcact ttctcccttc tgagcatcat aaagccattg atctcatata tgatgagatt 5880 ctcaacacaa ccatctgcct ggctaatggg atggtcatca agaagaatgt tgggaacaac 5940 agcgggcaac ctagcactgt cgtcgataac acacttgtgc ttatgactgc atttctctac 6000 gcatacattc acaaaacagg agaccgcgaa ttggccttgc taaacgagcg tttcatcttt 6060 gtttgcaatg gcgatgacaa caagtttgcc atatctccac agtttgacga agagtttggg 6120 catgatttct ccccagaact tgttgaactt ggactcacgt acgaatttga tgacatcact 6180 agcgacattt gcgagaatcc ttatatgtcc ctcaccatgg tgaaaacccc ttttggcgtt 6240 ggtttttctc ttcccgtgga gagaatcata gccatcatgc aatggtccaa gaaaggggga 6300 gttctgcact catatctggc tggcatttcc gcaatttacg aatccttcaa cacaccaaaa 6360 cttttcaaat caatctatgc gtatcttctt tggctcactg aggagcacga ggcagaaatt 6420 ctcgcagcca tgactcaatc ctcaactgct cttcccatac catcaatgct cgatgtttat 6480 cggttgcatt atggtgatga tgagatttgg ctacaagctg ctgattctct cactgaggcg 6540 caaaaagaag ctgcacacat tgctgcagtt gataaagcac gcgccgacct agccgatgtt 6600 gatcgtagac gtaaagttga ggccgatcgt gtggaagcgg caagagtcaa aaaggcagct 6660 gatgccgcac ttaaaccagt taacctcaca gcaacacgca tgcccacaga agatgatggc 6720 aaacttaaaa caccatctgg cgctagaata ccatcatcag ctgcagatgg taactggagc 6780 gtgccagcaa cgaagcaagt taacgctggt ttgacactta aaattcccct gaataagctc 6840 aaaagtgtac ctaagtctgt tatggagcat aacaactcag tcgcactcga atccgagctg 6900 aaagcctgga ctgatgctgt gcgcacaagt ttaggtatca caactgatga ggcatggatc 6960 gatgccctca ttcccttcat cggatggtgc tgcaacaatg gcacctcaga caagcatgct 7020 gagaatcaag taatgcaaat tgacagcgga aagggagctg tcacagagat gagtctgtcc 7080 ccatttattg ttcatgctcg aatgaatggt ggactccgaa ggatcatgcg caactacagt 7140 gatgaaaccg tcttactcat cacaaacaac aaactagttg cacattggtc aatgaagcat 7200 ggcgcttctg caaacgcaaa atacgctttc gatttcttcg tcccacgatc atggatgaac 7260 ccacaggata tcgaagtgtc aaagcaagcg cgcttagcag cacttggaac tggaacgtat 7320 aacaccatgt taacttccga cactaccaat ctgcgtaaga caaccaacca cagggttctg 7380 gactcagatg gacacccaga actaacctaa accatcaccc cgtgccttat acatcaccca 7440 cccccactca taattcagtc tttaaattat gttcgtgacg tctttgtatc aggctcggaa 7500 cggttctatg atccatatgc ctttggcagt tacaatgtca gcattctcat tgaggagtat 7560 gacagcgttt gatcagccgt tttcaatcat ccgtcgttgg atggtggtgc acttagtgca 7620 cttacgagta ccagaaggta at 7642 //