ID AB430768; SV 1; linear; genomic RNA; STD; VRL; 3585 BP. XX AC AB430768; XX DT 06-SEP-2008 (Rel. 97, Created) DT 30-JAN-2009 (Rel. 99, Last updated, Version 2) XX DE Barley yellow mosaic virus genomic RNA, segment RNA2, complete sequence, DE strain: BaYMV-III. XX KW . XX OS Barley yellow mosaic virus OC Viruses; Riboviria; Potyviridae; Bymovirus. XX RN [1] RP 1-3585 RA Nishigawa H., Natsuaki T.; RT ; RL Submitted (28-MAR-2008) to the INSDC. RL Contact:Hisashi Nishigawa Utsunomiya University, Center for Bioscience RL Research & Education; Mine-machi 350, Utsunomiya, Tochigi 321-8505, Japan XX RN [2] RX DOI; 10.1007/s00705-008-0163-1. RX PUBMED; 18636220. RA Nishigawa H., Hagiwara T., Yumoto M., Sotome T., Kato T., Natsuaki T.; RT "Molecular phylogenetic analysis of Barley yellow mosaic virus"; RL Arch. Virol. 153(9):1783-1786(2008). XX DR MD5; b2a21acff75906e174bc4b16fc42e860. XX FH Key Location/Qualifiers FH FT source 1..3585 FT /organism="Barley yellow mosaic virus" FT /segment="RNA2" FT /strain="BaYMV-III" FT /mol_type="genomic RNA" FT /country="Japan:Tochigi" FT /isolation_source="Barley cv. Mikamo Golden" FT /db_xref="taxon:12465" FT CDS 155..2827 FT /codon_start=1 FT /transl_table=1 FT /product="polyprotein" FT /db_xref="GOA:B5BSW4" FT /db_xref="InterPro:IPR001456" FT /db_xref="InterPro:IPR031159" FT /db_xref="InterPro:IPR036417" FT /db_xref="InterPro:IPR042308" FT /db_xref="UniProtKB/TrEMBL:B5BSW4" FT /protein_id="BAG70352.1" FT /translation="MSASSSRLLFDCGSLDWPNKSLFGDPTTRDVMNEHISSTWNAVIR FT RHMLAPNADAETILGRDGLPSAQFDAYGAMLPSFIQALNAPTTRLRISAPLSTAESILC FT ADASHAPWLYMANSVCAYEATHLQPVQTFIAFNFAHGYCYLSLFIPLSFRITFENARSF FT SRFLEQLPDILGAYPTLAAIYKTMLFAIRLFPEVLQAPIPIIAKRPGVLQFHVSDARGL FT PPSWFPMKCGSVASFVALITNNLNSDLLDGIVGSNGDGEHYTNWNSGHDHWIVNRFITV FT KDLHSSLKSALEVDLDTEGGRNAVLDLLLDLGVTNLVRREKRFPAYFQGAESVYLLLSC FT ERVGNELVAVQDALQEPLANYSGLDLRALIINLGGLPSRHSDICYTRNIFENDNHLVWN FT FEFYRIASITKNAQIDRDVLSSSMPKLFSDFVSESTNGQYRVKEPRPVAQYRVEHDEPV FT ASSAPSAWWQVLIGITTAILGAIIFFLWRCFLRAKRVKFQAKDSFPWFTTSGDDDSPPP FT PGDSPSRPPGHSPDRVLPRTVVRDLSFNDDDDLHSVDLNEAGSRFGEIVSLIARGNLRE FT LAGAIPESLSNLTLLQTSASGSGFYTMVALYLATLGDAITAFHEHNDASPATIQSLRTL FT ELQLEARGLRFNEAGTPANLIQRGVNSSVGRALVRLTQSALLATGENFRTRMATTLERI FT AAERLNTLTAYDQRVIEMTTELLAAIKTALEVERSELTPHLANAEALLQVYNNLFSTDY FT ASASLLALRREMILRSAEGRVGEQPTSASDAANEELVQRSMTKLDKEIELFQAQIDSQR FT RAVTITEASNLRENILQPINTVANIAMAGAFLRGGARHRMPGMPDVATPMPNPFRAFSG FT RGHSLTSTRSGGLFRRPRV" XX SQ Sequence 3585 BP; 922 A; 919 C; 776 G; 968 T; 0 other; aaaataaaac aaccctaaac caaaacaaac aaaacaaagc aaacacaaac aacacacgct 60 tcccaagccc acaaaacttg tagagtgatt tctgtcatcc tactctttgc aggctttcca 120 gcaaatcaac ccgctcgctt tcaaaccctc catcatgtct gcttctagtt cacggttact 180 cttcgactgt ggcagtcttg actggccaaa caagagcttg tttggtgatc ccacaacgcg 240 agatgtcatg aacgaacaca tttccagcac gtggaatgcg gttattagaa ggcacatgtt 300 ggcgcccaat gccgacgccg agactatatt gggccgtgat ggtttaccat ctgctcaatt 360 tgacgcttac ggagccatgt tacctagctt catccaagct ttaaacgcac ctacaacgcg 420 tctccgaatc agcgcaccgc tgtctaccgc tgagtccatc ttgtgcgctg atgcatccca 480 cgctccttgg ttgtacatgg caaatagtgt gtgcgcatac gaagcaactc atctgcagcc 540 tgtacaaact tttatcgctt tcaactttgc gcatggctat tgttacctca gtctcttcat 600 accactaagc tttcgcatta ccttcgagaa tgctcgaagt ttcagtcggt tcctcgagca 660 gcttcctgac attttaggtg cgtatccaac attggccgca atatataaaa caatgctatt 720 cgctattagg cttttcccag aggtgctaca agctccaatt cccatcattg caaaaaggcc 780 tggcgtgctc caattccacg ttagtgatgc cagagggcta ccaccctcat ggttccccat 840 gaagtgtggc agtgtggcat ctttcgtagc actcattacc aacaacctga acagcgattt 900 gcttgatgga attgttggtt caaatggtga tggcgagcac tacacaaact ggaactctgg 960 acatgatcac tggattgtga atcgattcat aacagtcaag gatttgcaca gcagcttaaa 1020 gtcagctctg gaggttgact tggacacaga gggcgggcga aatgccgttc tcgatttgct 1080 tctagatctt ggggttacta atcttgtccg aagagagaaa cgcttcccag catacttcca 1140 gggagctgaa agcgtatatc tacttctctc gtgcgagaga gttgggaacg agttagtagc 1200 cgtgcaagat gctttgcagg aaccattggc taattactct ggtttagatt tgagagctct 1260 catcatcaat cttggcggtt taccaagcag acactctgat atttgctaca cacgcaacat 1320 ttttgaaaac gataatcatc tggtttggaa ctttgagttc taccggatag cctcaatcac 1380 gaagaatgca caaattgaca gagatgtgct aagctcatcc atgccgaaat tgtttagcga 1440 ctttgtttca gagtcgacaa atggtcagta cagagtcaaa gaaccaagac ctgttgctca 1500 atacagggtt gagcatgatg aaccagttgc tagtagtgcc ccatctgctt ggtggcaagt 1560 tcttattggc atcaccaccg cgattcttgg cgcaataata ttctttctct ggaggtgttt 1620 cttacgtgct aagcgtgtga aattccaggc aaaggactcc ttcccatggt ttaccacatc 1680 tggtgatgat gactcaccgc ctccgcctgg tgactccccg tcgcgccctc ctggacacag 1740 cccagatcga gttcttccgc gcacagttgt tcgagatctt agcttcaatg acgatgatga 1800 cttacatagc gttgatctca acgaagctgg atcgcgtttt ggggagattg tctctttaat 1860 tgcaagggga aatcttcgcg agttagctgg tgcaattcct gaatctctca gcaacctaac 1920 cctccttcaa acgagtgcaa gtgggtcagg tttttacact atggtggctt tgtaccttgc 1980 cactttaggg gatgccatca ctgcatttca tgagcacaat gatgcctcac ctgccacaat 2040 tcaatcactg cgaacgctcg aacttcagct tgaagcccgt ggtttgcgtt tcaatgaagc 2100 tggcacaccc gcaaatctca ttcagagggg cgttaactct tctgttggta gagcacttgt 2160 gcgactcaca cagagtgctc tcctagctac tggtgagaac tttcggacac gcatggcaac 2220 cacacttgaa agaatcgctg ctgagcgtct taacacatta accgcttatg atcagcgagt 2280 tattgaaatg acaactgagc tcctagcagc gattaaaacc gctcttgagg ttgagcgcag 2340 tgaactcact ccacatctcg caaacgccga ggctttgctt caagtttaca ataatctctt 2400 cagcaccgat tacgcttcag catcgctgct cgctcttagg cgcgagatga ttcttaggag 2460 tgctgaaggg cgtgttggag aacagcccac tagtgcttct gacgctgcca acgaggagtt 2520 ggttcaacgt tccatgacaa aattggataa ggaaattgag ttgttccagg cgcaaattga 2580 tagccagcgc cgcgccgtca ccataactga agcatccaat ctcagagaaa atatattgca 2640 gccaatcaac actgttgcaa atattgctat ggctggagct tttctgcgtg ggggcgcacg 2700 tcatcgcatg ccaggaatgc cagacgtagc tacgcccatg cccaaccctt ttcgagcttt 2760 ctcagggagg ggacattcac tcacttcaac tcgaagtggc ggtcttttcc gacgccctcg 2820 agtctagaat tctcatcaca gcagcattta cttttcaccg ccttagcata gtttagatca 2880 acatcattca tttctctatc ctctcgccat ctgcacacca ttgccattaa tatggtagag 2940 ttagcgattc atcccttgct acgctcaaaa gtctccatct ttagaccacc tgcaaacaca 3000 caaaatacca aaaataccat ttatcattct gtttcaaacg ccagcatttt aaattacccg 3060 caattgcatt atcgtttcgc catcaaagta tggttcgttt catcaacatc tgctcgcacg 3120 attgggtgta tggggccagt gttgtttcgg gtatggaatt caaatggtaa gaaattgatt 3180 cttctcacca tgagtttttc aggggataag ttcggtgcta cagctagcgg ctgtatcctt 3240 aacgatgccc cacaccacga aacaccattg attcttcgga attagccttt caaatatccc 3300 aactgcaatg agcacgatag cattgcatct ccactcaagg tccggttaga gtccctggca 3360 ggtgtgggct acaggagcat gtgaatgctt ctctgtcacc atctgtcgtc tgcggcctct 3420 atctagcact acgagtggag ccacgtcttt aaatccccag catgtttact ttatgttctg 3480 catagaaaac gtcacatctg tgatacaaaa acatgcaaca cgtgcccatc atcggtcgcg 3540 ggttgtagtc tgacgaacaa caactttgta cacaggaaat gtgac 3585 //