ID   AB428575; SV 1; linear; genomic RNA; STD; VRL; 1919 BP.
XX
AC   AB428575;
XX
DT   10-JAN-2009 (Rel. 98, Created)
DT   05-DEC-2010 (Rel. 107, Last updated, Version 2)
XX
DE   Flammulina velutipes isometric virus RdRp gene for putative RNA-dependent
DE   RNA polymerase, complete cds.
XX
KW   .
XX
OS   Flammulina velutipes isometric virus
OC   Viruses; Riboviria; Partitiviridae; unclassified Partitiviridae.
XX
RN   [1]
RP   1-1919
RA   Magae Y.;
RT   ;
RL   Submitted (14-MAR-2008) to the INSDC.
RL   Contact:Yumi Magae Forestry and Forest Products Research Institute,
RL   Department of Applied Microbiology; Matsunosato 1, Tsukuba, Ibaraki
RL   305-8687, Japan
XX
RN   [2]
RA   Magae Y., Kanematsu S., Itoh M., Matsumoto T., Sunagawa M.;
RT   "Molecular characterization of a novel Partitivirus associated with
RT   degenerate symptoms of the basidiomycete Flammulina velutipes.";
RL   Unpublished.
XX
RN   [3]
RC   Publication Status: Online-Only
RX   PUBMED; 21106114.
RA   Magae Y., Sunagawa M.;
RT   "Characterization of a mycovirus associated with the brown discoloration of
RT   edible mushroom, Flammulina velutipes";
RL   Virol J 7:342-342(2010).
XX
DR   MD5; 4588c06a35e5d87913968b3cf52dba50.
DR   EuropePMC; PMC3002925; 21106114.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1919
FT                   /organism="Flammulina velutipes isometric virus"
FT                   /mol_type="genomic RNA"
FT                   /isolation_source="Flammulina velutipes isolate No.6"
FT                   /db_xref="taxon:511616"
FT   CDS             97..1860
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="RdRp"
FT                   /product="putative RNA-dependent RNA polymerase"
FT                   /db_xref="GOA:B7X9J3"
FT                   /db_xref="UniProtKB/TrEMBL:B7X9J3"
FT                   /protein_id="BAH08700.1"
FT                   /translation="MCLTNLLYIGDRVIRSSTGKIIKPMTQHVDLFQKMTRDRIVRKAF
FT                   YKFLHPYEVDEICNGFRRSHGGPEATDEDFMSYDQPEHKVDRDQHYRKALRKVAEAFRP
FT                   PEKFKPVHYTDQRYYPWELAVSAESPYNIGQWYDDYLKRLQRELPPGEKFTYAKTFHNF
FT                   YDKIFVDNRLNIHKIKDRHPDFFDAATGLPKPYYWTNLRSRFHVVKADEPDKIRAVFGV
FT                   PKLLLQAEQTFIWPMLSHYLDNSDRYPLLWGNEMMSGGWRKLNRTIYNGRTVNTVLSLD
FT                   WSQFDKRALHEVIDDVHDIWRSYFDFSFYMPTSFYPNAPTDESRLENLWEWMTYNIKKY
FT                   PIRLSSGKLSQWRFNGIASGFQQTQLLDSFVNMIMILTCLSRAGVNINSKDFFISSRGR
FT                   FTYRTFPEMMYQLHGMKFLDMIANNAMYYFNAKLNVDKSEINWNTNGMKVLGYPNDYGT
FT                   PRRTDQDLLSHLFFPERIYSLPSLASTCIGIAYASCGSNPKVYAICQDIFLFLRNVFDV
FT                   APDVVTNRWMFRAGLLNYDEFTSMTFNSFPSMLELQARTLGQPTRSLATRERLWPTLPE
FT                   SKNGFHFLCKP"
XX
SQ   Sequence 1919 BP; 573 A; 457 C; 368 G; 521 T; 0 other;
     ggaataagtc ccctgatccc gactgtaaat cgagactaaa ggctcaacga agacttaacc        60
     ctactgaact tacaattcac gaattcacat tacaacatgt gtcttacaaa cttgctgtac       120
     attggagacc gcgttattcg cagctctact ggaaagatca tcaaaccgat gactcagcat       180
     gtagaccttt ttcaaaagat gacgagagac cgtattgtgc gaaaagcatt ttacaagttc       240
     ctccatcctt atgaggtcga tgaaatttgc aacggattca gacgctcaca tggcggacct       300
     gaagcaaccg acgaagattt catgagttac gatcaacccg aacacaaggt agaccgtgac       360
     caacactatc gaaaagcact tagaaaagta gccgaggcat ttcgcccacc ggagaaattc       420
     aaacctgtgc attacactga ccaaagatac tacccttggg aactcgcagt ttctgctgaa       480
     tccccgtata acattggaca atggtatgac gactatttaa aacgccttca acgcgaacta       540
     cctcctggtg agaagttcac ttatgctaaa acgtttcaca acttttatga caagattttt       600
     gtcgataatc gtttaaatat tcacaagatc aaggaccgac accctgactt tttcgatgct       660
     gccactggac tcccgaaacc ctactactgg actaaccttc gctcaaggtt ccatgtagtt       720
     aaggctgacg aaccggataa aatccgagcc gtcttcggcg tgcccaaact tctgctacaa       780
     gcagaacaga cttttatctg gcctatgcta tcgcattacc tcgacaattc tgatcgctac       840
     ccgcttcttt ggggaaacga aatgatgtct ggaggatggc gaaagcttaa ccggaccatc       900
     tacaacggac ggactgtaaa cacagtactc agtttagatt ggagtcaatt tgacaagaga       960
     gcacttcacg aagtcatcga cgacgtacat gatatatggc gttcttattt cgatttctct      1020
     ttctatatgc ctacctcttt ctacccaaac gctccaaccg acgaatcacg tcttgagaat      1080
     ttgtgggaat ggatgactta caacattaaa aagtatccaa tccgactcag ctcaggcaag      1140
     ctatctcaat ggcgattcaa tggtatcgcg tctggatttc aacagactca actgctagac      1200
     agttttgtca atatgattat gattcttaca tgcttatcaa gagcaggagt caacatcaac      1260
     tcgaaggact ttttcataag ttcaagggga cgattcactt atcgcacttt tcctgagatg      1320
     atgtatcaac tccacggaat gaagttcctc gatatgatcg cgaacaatgc tatgtattat      1380
     tttaatgcta agctaaacgt cgataaatct gagatcaact ggaatacgaa cggaatgaaa      1440
     gttctgggat acccgaatga ttatggaaca ccacgcagga cagatcaaga tctgctttca      1500
     cacctgttct tccctgaaag aatttactct ttgccttcat tggcatctac gtgtattggt      1560
     attgcttatg cttcatgcgg ttcgaacccg aaagtgtacg ctatatgcca agatattttt      1620
     ctttttctaa ggaatgtatt tgacgtagcc cctgacgttg ttacaaaccg atggatgttc      1680
     agagctggac tcttgaacta cgatgaattc acgtctatga cgtttaattc cttcccatct      1740
     atgctcgagc ttcaagctcg aacccttgga caacctactc gatcgcttgc gactcgagaa      1800
     cgactctggc ctaccctgcc cgaatcgaag aatggattcc acttcttatg caaaccttag      1860
     tctcccggag atatgatatt tatcttacga aaacaaaaaa aaatttccaa aataaaaat       1919
//