ID AB377111; SV 1; linear; genomic DNA; STD; VRL; 2754 BP. XX AC AB377111; XX DT 05-FEB-2008 (Rel. 94, Created) DT 16-FEB-2011 (Rel. 107, Last updated, Version 3) XX DE Tomato leaf curl Philippines virus DNA, segment A, complete sequence, DE isolate: Laguna1. XX KW . XX OS Tomato leaf curl Philippines virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2754 RA Matsuda N., Bajet B.N., Sharma P., Ikegami M.; RT ; RL Submitted (24-JAN-2008) to the INSDC. RL Contact:Naoki Matsuda Graduate School of Agricultural Science, Tohoku RL University; 1-1, Tsutsumidori-Amamiyamachi, Aobaku, Sendai, Miyagi RL 981-8555, Japan XX RN [2] RX DOI; 10.1007/s00705-010-0837-3. RX PUBMED; 21053032. RA Sharma P., Matsuda N., Bajet N.B., Ikegami M.; RT "Molecular analysis of new isolates of Tomato leaf curl Philippines virus RT and an associated betasatellite occurring in the Philippines"; RL Arch. Virol. 156(2):305-312(2011). XX DR MD5; c4c6a39c08a07887717e0ae151c0c3df. XX FH Key Location/Qualifiers FH FT source 1..2754 FT /organism="Tomato leaf curl Philippines virus" FT /segment="A" FT /isolate="Laguna1" FT /mol_type="genomic DNA" FT /country="Philippines:Laguna" FT /isolation_source="tomato" FT /db_xref="taxon:96054" FT CDS 142..486 FT /codon_start=1 FT /transl_table=1 FT /gene="V2" FT /product="pre-coat protein" FT /db_xref="GOA:B0I510" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:B0I510" FT /protein_id="BAG06843.1" FT /translation="MWDPLVHPFPESLHGFRCMLAIKYLQSLQNKYSPDTVGHEFLKDF FT ICILRSKNYAEAFNRYSNVVANVYNTSEAQLRESVQSPCLCPHCPRHVLQAKVMDLQAH FT VSQAQDVQNV" FT CDS 302..1078 FT /codon_start=1 FT /transl_table=1 FT /gene="V1" FT /product="coat protein" FT /db_xref="GOA:B0I511" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:B0I511" FT /protein_id="BAG06844.1" FT /translation="MPKRSIDTVTSLPMSITRRRLNYGSQYSLPASVPTVPDMSYKRRS FT WTYRPMFRKPKMYRMYRSRDVPRGCEGPCKVQSYEQRHDIAHVGKVICVSDVTRGNGLT FT HRVGKRFCVKSVYVLGKVWMDENIKTKNHTNTVMFFLVRDRRPYGTPQDFGQVFNMYDN FT EPSTATVKNDNRDRYQVLRKFQATVTGGQYASKEQAIVKRFMKINNHVTYNHQEAAKYD FT NHTENALLLYMACTHASNPVYATLKIRIYFYDSVQN" FT CDS complement(1075..1476) FT /codon_start=1 FT /transl_table=1 FT /gene="C3" FT /product="C3 protein" FT /db_xref="GOA:B0I512" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:B0I512" FT /protein_id="BAG06845.1" FT /translation="MDSRTGEPITAAQAENGVYTWTITNPLYFKISQHDKMPFLKNHDI FT ITVQIQFNHNLRKALGMHQCFLICKIWTRLHPQTWHFLRVFKYQCMKYLYSLGVISINN FT VIRAIKHVLYAVIQTIDVQISHIIKFNIY" FT CDS complement(1217..1624) FT /codon_start=1 FT /transl_table=1 FT /gene="C2" FT /product="C2 protein" FT /db_xref="GOA:B0I513" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:B0I513" FT /protein_id="BAG06846.1" FT /translation="MQNSSPSRGHSTQVPIKVQHKIAKRRPIRRRRIDLPCGCSYYLGL FT NCASYGFSHRGTHHCSSGREWRIYLDDNKSPLFQDIPTRQDAVLEKPRYHNSTNTVQPQ FT PEESVGNASMFSDLQNLDSFTSSDLAFLKSI" FT CDS complement(1524..2612) FT /codon_start=1 FT /transl_table=1 FT /gene="C1" FT /product="replication-associated protein" FT /db_xref="GOA:B0I514" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B0I514" FT /protein_id="BAG06847.1" FT /translation="MAPPRKFQINAKNYFLTYPKCCLTKEETLAQIKTLDTVTNKKFIK FT ICRELHEDGSPHLHVLIQFEGKFRCTNKRFFDLVSPTRSAHYHPNIQGAKSSSDVKSYI FT DKDGDTLEWGEFQIDGRSARGGQQSANDAYAKAINTGSKSEALNVIRELAPKDFVLQFH FT NLNANLDRIFAPPLEVFRCPFLSSSFDQVPKELDDWVSENVRDAAARPWRPISIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEDKNSPLRDWALKNAEFITLTRPL FT YSGTHQSPAQNSQEETNTQAEN" FT CDS complement(2165..2455) FT /codon_start=1 FT /transl_table=1 FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:B0I515" FT /protein_id="BAG06848.1" FT /translation="MGALISMCSSSSRGNSDARIRDSSTWCPQPGQHITIQTYRELNQA FT PTSNHILIKTETPSNGVSFRSMEDLLEGVNNQPMMLTPKQLTQEVSRRLLM" XX SQ Sequence 2754 BP; 733 A; 544 C; 601 G; 876 T; 0 other; accgtgggcc gcgcaaattt tttttatatt gggcctaatg ggcctgttgg aagtcggccg 60 cgaccaatgg aaacgttccc tcatcgctta acaatcatgt tgtcctctat ttatttctgc 120 tgcatcagtt ttgtactaaa aatgtgggat cctctggtac atccttttcc tgaaagctta 180 cacggcttca gatgtatgct tgccatcaaa tatcttcaga gcttacagaa taaatattct 240 cctgatactg ttggacatga gtttttgaaa gattttatat gcatattgcg aagtaagaat 300 tatgccgaag cgttcaatag atacagtaac gtcgttgcca atgtctataa cacgtcggag 360 gctcaattac gggagtcagt acagtctccc tgcctctgtc cccactgtcc cagacatgtc 420 ttacaagcga aggtcatgga cttacaggcc catgtttcgc aagcccaaga tgtacagaat 480 gtatagaagc cgtgatgttc ctcgtgggtg cgaaggccca tgtaaggttc agtcttatga 540 acagcgtcat gatatagccc atgtgggtaa ggtcatatgt gtgtctgatg tcactcgtgg 600 taatgggctc acacatcgtg ttggaaagag gttttgtgta aagtctgtgt atgtgttggg 660 gaaggtctgg atggatgaga acatcaagac taagaatcac acaaacactg tcatgttttt 720 tttagttcgt gataggagac cctatgggac tccccaggat tttggtcagg tttttaacat 780 gtatgataat gagcctagta ctgcaactgt taaaaatgat aatagagatc gatatcaagt 840 tcttcgtaaa tttcaagcta ccgtgactgg aggtcagtat gcaagcaagg agcaagcaat 900 agtcaagagg ttcatgaaga ttaacaacca tgttacttac aatcatcaag aggctgcgaa 960 gtatgataat catacagaga acgctttact gttgtatatg gcttgtactc atgctagtaa 1020 cccagtgtat gctacgttga aaatcagaat ctatttttat gattctgttc agaattaata 1080 aatattgaat tttattatat gagaaatttg tacatctatt gtttgaatta cagcgtacag 1140 tacatgcttg atagccctaa ttacattgtt tatgctaata actcctaaac tatacaaata 1200 cttcatacac tgatatttaa atactcttaa gaaatgccaa gtctgaggat gtaaacgagt 1260 ccagattttg cagatcagaa aacattgatg cattcccaac gctttcctca ggttgtggtt 1320 gaactgtatt tgtactgtta tgatatcgtg gtttttcaag aacggcatct tgtcgtgttg 1380 ggatatcttg aaataaaggg gatttgttat cgtccaggta tatacgccat tctctgcctg 1440 agctgcagtg atgggttccc ctgtgcgaga atccatatga agcgcaatta agtcctagat 1500 agtaagagca gccgcaagga agatcaattc tccgcctgcg tattggtctc ctcttggcta 1560 ttttgtgctg gactttgatg ggtacctgag tagagtggcc tcgtgagggt gatgaattct 1620 gcattcttta gtgcccagtc tctgagtgga gaatttttat cctcatccaa gtactcttta 1680 tacgacgatg taggtcctgg attgcagagg aagattgttg ggatcccacc tttaatttga 1740 attggtttcc cgtactttgt gttgctttgc cagtcccttt gggcccccat aaactcttta 1800 aaatgcttta gatagtgggg gtcgacgtca tcaatgacgt tgtaccaagc atcattactg 1860 tacacctttg gactaaggtc cagatgtcca cacaaataat tatgtggtcc cagagatcta 1920 gcccacatcg tcttccccgt cctgctatct ccttctatga caatacttat gggtctccat 1980 ggccgcgcag cggcatcccg aacattctcg gaaacccagt catcaagttc ttttggaact 2040 tggtcgaaag aagaagaaag aaaaggacaa cgaaaaacct ctaaaggagg tgcaaagatc 2100 ctatctaaat tggcatttaa attatgaaat tgtaaaacaa aatcttttgg agctaactcc 2160 ctaattacat taagagcctc cgacttactt cctgtgttaa ttgctttggc gtaagcatca 2220 ttggctgatt gttgaccccc tctagcagat cttccatcga tctgaaactc accccattcg 2280 agggtgtctc cgtctttatc aatatatgat ttgacgtcgg agcttgattt agctccctgt 2340 atgtttggat ggtaatgtgc tgacctggtt ggggacacca ggtcgaagaa tctcttattc 2400 gtgcatctga atttcccctc gaactggatg agcacatgga gatgagggct cccatcttcg 2460 tgcagttctc tgcagatttt gatgaatttt ttgtttgtta cagtatctag tgtttttatc 2520 tgggcaaggg tttcctcttt tgtaagacaa catttgggat atgtaagaaa ataatttttg 2580 gcatttattt ggaattttct gggtggtgcc atttgactca gtcaatgggt acctattgag 2640 aggatttcat tctactcagg gtatcggtac attggtaccc atatatactt ggttacctaa 2700 tggcataatt gtaatttttt tatgggcttc caagcggccc acgactataa tatt 2754 //