ID AB369280; SV 1; linear; genomic RNA; STD; VRL; 3091 BP. XX AC AB369280; XX DT 28-NOV-2007 (Rel. 93, Created) DT 28-JAN-2009 (Rel. 99, Last updated, Version 2) XX DE Tobacco rattle virus RNA2, complete sequence, isolated from potato. XX KW . XX OS Tobacco rattle virus OC Viruses; Riboviria; Virgaviridae; Tobravirus. XX RN [1] RP 1-3091 RA Sohn S., Choi S., Park J., Kim K., Lee S., Ryu K., Choi J.; RT ; RL Submitted (23-NOV-2007) to the INSDC. RL Contact:S Sohn National Institute of Agricultural Biotechnology, RDA, Cell RL and Genetics; Suin-ro 322, Suwon 441707, South Korea XX RN [2] RA Choi S., Sohn S., Park J., Kim K., Lee S., Ryu K., Choi J.; RT "Molecular characterization of papaya ringspot virus in Korea"; RL Unpublished. XX DR MD5; 03441cd02a0051f27eaf7b3bf7e48faf. DR RFAM; RF01101; TLS-PK6. XX FH Key Location/Qualifiers FH FT source 1..3091 FT /organism="Tobacco rattle virus" FT /lab_host="Nicotiana benthamiana" FT /mol_type="genomic RNA" FT /country="South Korea" FT /isolation_source="Potato" FT /collected_by="Lee, YK" FT /identified_by="Lee, YK" FT /db_xref="taxon:12295" FT CDS 524..1126 FT /codon_start=1 FT /transl_table=1 FT /gene="CP" FT /product="coat protein" FT /db_xref="GOA:A9EEY9" FT /db_xref="InterPro:IPR001337" FT /db_xref="InterPro:IPR036417" FT /db_xref="UniProtKB/TrEMBL:A9EEY9" FT /protein_id="BAF93930.1" FT /translation="MTDGMYDEEFDSKALNETFSPWVEEKNWKDVLMRLSAMKFALQAD FT RDKIPGVLSDLKKDCPFSAFKRFPDKEMWSKLTKEAVIALAQIQAASSFKRRADEKNAV FT SGLIAATPAQASTGNANPSGSATTVVRPPRLDDSSFQEDSFSFGKFDDASTAYHKALSY FT LEGLNLKPLYRRQFEKSYNTRWVPAAAPVAPGPRPNP" FT CDS 1239..2213 FT /codon_start=1 FT /transl_table=1 FT /product="38K protein" FT /note="putative 2b gene" FT /db_xref="UniProtKB/TrEMBL:A9EEZ3" FT /protein_id="BAF93931.1" FT /translation="MEEYRLWSKNPDYFFSDNAKLFLLHGHHDSPYYKSGEYTVFRSVN FT WGDPEFLMVIGMSRLLTFLSERHLCINVDGNCYSRIQEGLYYYGKFDIYSLMVGNSTQW FT DDFIIYRELMRVHIDFRNVLELLQLAGADRGRLFPRLRELLDLEKVVYSTSKLPDKDIT FT LMIQNLKDQLSATTLENDNLKKEIAMLKSRVEAAQAQAQTRHLENDDLKKQIESLKKKT FT ADVGSISEAIVQVPVVLPAKPTPKVKKYPDDYNNEELSAMSKVGDDNDFEHLSPIDKRI FT WGPKDIYHYVKMYYRFPQRNFIDERMSKTRKEKTDAQAVCRPA" FT CDS 2215..2811 FT /codon_start=1 FT /transl_table=1 FT /product="16K protein" FT /note="putative 2c gene" FT /db_xref="InterPro:IPR007968" FT /db_xref="UniProtKB/TrEMBL:A9EEZ4" FT /protein_id="BAF93932.1" FT /translation="MTSASIWTLRQGDYPKGSMLIRRRVKNSVLTGKGGYVDLDGNVAV FT GTGWRWEIDFSDLRKLRFSFDSSVTVLGHETCSIGHANKLRKQVADMVGVTRRRAENNC FT GWFVCIIINDFTFDVYNCCGRSHLEKCRKRFEARNREIWKQIERVRAEKAFTTVKKSRN FT SKPSKKIFKEREDFGTPKRFLRDDVPFGIDQLFAF" XX SQ Sequence 3091 BP; 883 A; 535 C; 754 G; 918 T; 1 other; ataaaacatt gcaccattgg tgttgccctg gccggggtgt gtctttgaac gcagtagaat 60 gtgctaattg acaagttgga ttacccggta gaacgtactt atccgacacg gccttttatc 120 cctttgttga gaggtttttc tcagccgcaa tgaaattctg gatttagttg gccgctagaa 180 ggctgaagga atgtagttgt gtttttagtt tagttaataa gtgtcttcca atacacatta 240 aaccttggac gtgttagcta cgaaagtgtg taaattttaa aaacaattag tcttccgtga 300 ttaaggatga ttaaggctaa aaacgattgt taatgatttt ggcaatcgca tccattcgct 360 atcacaagcg atggtggcat tgacccggaa aggtctaatc ttgcggtcat tcgactggaa 420 gaagcataat tatactgatt gtgcaacttt gtgttactat tctgacagtg attcttgctg 480 aactactggt tactgnatca cttgcgatca ctcacgttcc gctatgacag acggtatgta 540 cgatgaggag tttgatagca aagctctcaa cgaaacgttt tcgccatggg ttgaggagaa 600 gaactggaaa gacgttctaa tgaggttgag cgctatgaaa tttgcgttac aagctgacag 660 ggacaaaatt cctggggttt tatcagatct gaagaaagac tgtcctttca gtgcttttaa 720 gaggtttcct gacaaagaga tgtggtcgaa attgacgaag gaggctgtca ttgctttagc 780 tcaaattcaa gctgcttctt cttttaagag gagagcagat gaaaagaatg ccgtttctgg 840 gttgattgct gcaacacctg ctcaagcttc tactggtaac gcgaacccaa gtggttcagc 900 aaccacagtg gtgagaccac caaggttgga cgactcgtct tttcaagagg atagcttttc 960 ttttggcaaa ttcgatgacg cttctactgc gtatcataaa gctctctcct atttggaagg 1020 tttaaatttg aaaccgttat ataggagaca gtttgagaaa tcgtacaaca ctaggtgggt 1080 tcctgctgcc gctccggtgg cgcctgggcc gcgtccgaat ccctaattct gagtttgtca 1140 gatactcttt cagagggtca cgtgaaaatc gtgaggtggt gtttaccata taacataatg 1200 ctatatgtgg gcatttaaaa taatcacatt gctgcgagat ggaggagtat aggctttggt 1260 caaagaatcc ggattacttc ttttccgaca atgcaaaact gttcttactg catgggcatc 1320 acgatagtcc gtattataag agcggggaat acactgtttt tcgttcggtt aattggggag 1380 atcctgaatt tcttatggta attggaatgt ctagactttt aacttttcta tcagaaagac 1440 atttatgtat caatgtggac gggaattgtt attcgcggat ccaagagggt ctgtactact 1500 atggaaagtt tgacatttac tcgttaatgg ttggaaatag tactcagtgg gatgatttca 1560 taatttatag agagctaatg agagttcaca tcgactttcg taacgtgtta gaacttcttc 1620 agctggctgg cgctgataga ggtcgactgt ttcctaggtt gcgagaattg ttagacctcg 1680 aaaaggtcgt ttattcgacg tcaaaactac cggacaaaga tattacgctg atgatacaaa 1740 atctcaaaga tcagttgtct gcgacgactt tagagaacga caatttgaag aaagagatcg 1800 ccatgctgaa gagtcgagtc gaagctgcac aagcgcaagc tcagactaga catctcgaaa 1860 atgacgatct gaagaaacaa atcgagtcgt tgaaaaagaa aaccgcagat gtgggaagta 1920 tctctgaagc tattgttcaa gtaccggtgg tgttgcctgc gaagccgact cctaaagtta 1980 agaagtatcc cgatgattac aacaacgagg aactgagtgc aatgtcaaag gtaggcgatg 2040 ataacgattt cgagcattta tcaccaattg acaaaagaat ttggggccct aaggatatat 2100 atcattatgt taagatgtat tacagattcc cacagaggaa tttcatagac gaacgcatgt 2160 caaagacaag gaaagagaag acagacgcgc aagcggtctg tagaccagca taaaatgacg 2220 agcgcatcca tctggaccct aagacagggt gattacccga agggttctat gttaattcgt 2280 aggagggtta aaaattctgt cttgactggg aaaggtggtt acgtggatct ggacggtaat 2340 gtagcggtcg gaactggatg gcgatgggaa atcgacttta gtgacctgcg taagctgcga 2400 ttttcgtttg attcttcagt cactgttctt ggtcatgaga cgtgtagtat tggtcatgct 2460 aacaagttgc gaaagcaagt tgctgacatg gtcggtgtca cacgtaggcg tgcggaaaat 2520 aattgtggat ggtttgtctg tattattatt aacgatttta cttttgatgt gtataattgt 2580 tgcggccgta gtcaccttga aaagtgtcgt aaacgctttg aagcaagaaa tcgagaaatc 2640 tggaaacaga ttgaacgagt tcgagctgaa aaggcattta ctacggttaa aaagtctcga 2700 aattcgaaac cctctaagaa aattttcaaa gagagagaag attttgggac accaaaaaga 2760 tttttaagag atgatgttcc tttcggaatt gatcagttgt ttgctttttg attttatttt 2820 aaattgttat ctgtttctgt gtatagactg tttgagattg gcgtttggcc gactcattgt 2880 cttaccatag gggaacggac tttgtttgtg ttgttatttt atttgtattt tattaaaatt 2940 ctcaacgatc tgaaaaagct ttgttgctaa gagattattg ggggtgagta agtactttta 3000 aagtgatgat ggttacaaag gcaaaagggg ttaaacccct cgcctacgta agcgttatta 3060 cgcccgggaa ttaatcgtcg acctgcaggc a 3091 //