ID   AB369273; SV 1; linear; genomic RNA; STD; VRL; 2189 BP.
XX
AC   AB369273;
XX
DT   28-NOV-2007 (Rel. 93, Created)
DT   28-NOV-2007 (Rel. 93, Last updated, Version 1)
XX
DE   Cucumber mosaic virus RNA3, complete sequence, strain: Paf.
XX
KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-2189
RA   Sohn S., Choi S., Choi H., Kim K., Lee S., Ryu K., Choi J.;
RT   ;
RL   Submitted (23-NOV-2007) to the INSDC.
RL   Contact:S Sohn National Institute of Agricultural Biotechnology, RDA, Cell
RL   and Genetics; Suin-ro 322, Suwon 441707, South Korea
XX
RN   [2]
RA   Sohn S., Choi S., Choi H., Kim K., Lee S., Ryu K., Choi J.;
RT   "Genetic Variability of Pathogenicity of Cucumber mosaic virus strains
RT   isolated in Korea";
RL   Unpublished.
XX
DR   MD5; 68460123376d741ce922d0286a6feedd.
DR   EuropePMC; PMC3550734; 23637513.
DR   RFAM; RF01084; TLS-PK3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2189
FT                   /organism="Cucumber mosaic virus"
FT                   /segment="RNA3"
FT                   /lab_host="Nicotiana benthamiana"
FT                   /strain="Paf"
FT                   /mol_type="genomic RNA"
FT                   /country="South Korea"
FT                   /collected_by="Choi, JK"
FT                   /identified_by="Choi, JK"
FT                   /db_xref="taxon:12305"
FT   5'UTR           1..94
FT   CDS             95..934
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="3a MP"
FT                   /product="3a movement protein"
FT                   /db_xref="InterPro:IPR000603"
FT                   /db_xref="UniProtKB/TrEMBL:A9EET8"
FT                   /protein_id="BAF93915.1"
FT                   /translation="MAFQGTSRTLTQQSSAATSDDLQKILFSPEAIKKMATECDLGRHH
FT                   WMRADNAISVRPLVPEVTHGRIASFFKSGYDVGELCLKGYMSVPQVLCAVTRTVSTDAE
FT                   GSLRIYLADLGDKELSPIDGQCVSLHNHDLPALVSFRPTYDCPMETVGNRKRCFAVVIE
FT                   RHGYIXYTGTTASVCSNWQARFSSKNNNYTHIAAGKTLVLPFNRLAEQTKPSAVARLLK
FT                   SQLNNIESSQYLLTNAKINQNARSESEELNVESPPAAIGSSSASRSEAFRPQVVNGP"
FT   CDS             1232..1888
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:A9EEU0"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:A9EEU0"
FT                   /protein_id="BAF93916.1"
FT                   /translation="MDKSESTSAGRNRRRRPRRGSRSAPSSADANFRVLSQQLSRLNKT
FT                   LAAGRPTINHPTFVGSERCRPGYTFTSITLKPPKIDRGSYYGKRLLLPDSVTEYDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVTAISAMFANGASPVLVYQYAASGVQAN
FT                   NKLLYDLSAMRADIGDMRKYAVLVYSKDDALETDELVLHVDIEHQRIPTSGVLPV"
FT   3'UTR           1889..2189
XX
SQ   Sequence 2189 BP; 515 A; 518 C; 519 G; 636 T; 1 other;
     gtaatcttac cactgtgtgt gtgtgtgtgt gtgtcgagtc gtgctgtccg cacatttctt        60
     ttatctttgt acagtgtgtt agatttcccg aggcatggct ttccaaggta ccagtaggac       120
     tttaactcaa cagtcctcag cggctacgtc tgacgatctt caaaagatat tatttagccc       180
     tgaagccatc aagaaaatgg ctactgagtg tgacctaggc cggcatcatt ggatgcgtgc       240
     tgataatgct atttcagtcc ggcccctcgt tcccgaagta acccacggtc gtattgcttc       300
     cttctttaag tctggatatg atgttggtga attatgctta aaaggataca tgagcgtccc       360
     tcaggtgttg tgtgctgtta ctcgaacagt ttccaccgat gctgaagggt ccttgagaat       420
     ttacttagct gatctaggcg acaaggagtt atctcctata gatgggcaat gcgtctcatt       480
     acataaccat gatcttcccg ctttagtgtc tttccgaccg acgtatgatt gtcctatgga       540
     aacagttggg aatcgtaagc ggtgttttgc tgtcgttatc gaaagacatg gttatattgn       600
     gtataccggc accacagcta gcgtgtgtag taattggcaa gcaaggtttt catctaagaa       660
     taacaactac actcatatcg cagctgggaa gactctagta ctgcctttca acagattagc       720
     tgagcaaaca aaaccgtcag ctgtcgctcg cctgttgaag tcgcaattga acaacattga       780
     atcttcgcaa tacttgttaa cgaacgcgaa gatcaatcag aatgcgcgca gtgagtccga       840
     ggaattaaat gttgagagcc ctcccgccgc aatcgggagt tcttccgcgt cccgctccga       900
     agccttcaga ccgcaggtgg ttaacggtcc ttagcacttt ggtgcgtatt agtatataag       960
     tatgtgtgag tctgtacata atactatatc tatagtgtcc tgtgtgagtt gatacagtag      1020
     acatctgtga cgcgatgccg tgttgagaag ggaacacatc tggttttagt aagcctacat      1080
     cacagttttg aggttcaatt cctcttactc cctgttgagc cccttacttt ctcatggatg      1140
     cttctccgcg agattgcgtt attgtctact gactatatag agagtgtgtg tgctgtgttt      1200
     tctcttttgt gtcgtagaat tgagtcgagt catggacaaa tctgaatcaa ccagtgctgg      1260
     tcgtaatcgt cgacgtcgtc cgcgtcgtgg ttcccgctcc gccccctcct ccgcggatgc      1320
     taactttaga gtcttgtcgc agcagctttc gcgacttaat aagacgttag cagctggtcg      1380
     tccaactatt aaccacccaa cctttgtagg gagtgaacgc tgtagacctg gatacacgtt      1440
     cacatctatt accctaaagc caccaaaaat agaccgcggg tcttattacg gtaaaaggtt      1500
     gttattacct gattcagtca cggaatatga taagaagctt gtttcgcgca ttcaaattcg      1560
     agttaatcct ttgccgaaat ttgattctac cgtgtgggtg acagtccgta aagttcctgc      1620
     ctcctcggac ttatccgtta ccgccatctc tgctatgttt gcgaacggag cctcaccggt      1680
     actggtttat cagtatgccg catctggagt ccaagctaac aacaaattgt tgtatgatct      1740
     ttcggcgatg cgcgctgata taggtgacat gagaaagtac gccgtcctcg tgtattcaaa      1800
     agacgatgcg ctcgagacgg acgagctagt acttcatgtt gacatcgagc accaacgcat      1860
     tcccacgtct ggggtgctcc cagtctgatt ccgtgtttcc agaatcctcc ctccgatttc      1920
     tgtggcggga gctgagttgg cagttctgct ataaactgtc tgaagtcact aaacgtttta      1980
     cggtgaacgg gttgtccatc cagcttacgg ctaaaatggt cagtcgtgga gaaatctacg      2040
     ccagcagatt tacaaatctc tgaggcgcct ttgaaaccat ctcctaggtt tcttcggaag      2100
     gacttcggtc cgtgtacctc tagcacaacg tgctagtttc agggtacggg tgccccccca      2160
     ttttcatggg ggcctccaaa aggagacca                                        2189
//