ID   AB369270; SV 1; linear; genomic RNA; STD; VRL; 2215 BP.
XX
AC   AB369270;
XX
DT   28-NOV-2007 (Rel. 93, Created)
DT   28-NOV-2007 (Rel. 93, Last updated, Version 1)
XX
DE   Cucumber mosaic virus RNA3, complete sequence, strain: V.
XX
KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-2215
RA   Sohn S., Choi S., Choi H., Kim K., Lee S., Ryu K., Choi J.;
RT   ;
RL   Submitted (23-NOV-2007) to the INSDC.
RL   Contact:S Sohn National Institute of Agricultural Biotechnology, RDA, Cell
RL   and Genetics; Suin-ro 322, Suwon 441707, South Korea
XX
RN   [2]
RA   Sohn S., Choi S., Choi H., Kim K., Lee S., Ryu K., Choi J.;
RT   "Genetic Variability of Pathogenicity of Cucumber mosaic virus strains
RT   isolated in Korea";
RL   Unpublished.
XX
DR   MD5; e2375fe22d8efe88c412edba060dd003.
DR   EuropePMC; PMC3550734; 23637513.
DR   RFAM; RF01084; TLS-PK3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2215
FT                   /organism="Cucumber mosaic virus"
FT                   /segment="RNA3"
FT                   /lab_host="Nicotiana benthamiana"
FT                   /strain="V"
FT                   /mol_type="genomic RNA"
FT                   /country="South Korea"
FT                   /collected_by="Choi, HS"
FT                   /identified_by="Choi, HS"
FT                   /db_xref="taxon:12305"
FT   5'UTR           1..119
FT   CDS             120..959
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="3a MP"
FT                   /product="3a movement protein"
FT                   /db_xref="InterPro:IPR000603"
FT                   /db_xref="UniProtKB/TrEMBL:A9EER5"
FT                   /protein_id="BAF93909.1"
FT                   /translation="MAFQGTSRTLTQQSSAATSDDLQKILFSPEAIKKMATECDLGRHH
FT                   WMRADNAISVRPLVPEVTHGRIASFFKSGYDVGELCSKGYMSVPQVLCAVTRTVSTDAE
FT                   GSLRIYLADLGDKELSPIDGQCVSLHNHDLPALVSFQPTYDCPMETVGNRKRCFAVVIE
FT                   RHGYIGYTGTTASVCSNWQAGFSSKNNNYTHIAAGKTLVLPFNRLAEQTKPSAVARLLK
FT                   SQLNNIESSQYLLTNAKINQNARSESEELNVESPPAAIGSSSASRSEAFRPQVVNGL"
FT   CDS             1257..1913
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q9YJR3"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:Q9YJR3"
FT                   /protein_id="BAF93910.1"
FT                   /translation="MDKSESTSAGRNRRRRPRRGSRSAPSSADANFRVLSQQLSRLNKT
FT                   LSAGRPTINHPTFVGSERCKPGYTFTSITLKPPKIDRGSYYGKRLLLPDSVTEYDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVAAISAMFADGASPVLVYQYAASGVQAN
FT                   NKLLYDLSAMRADIGDMRKYAVLVYSKDDALETDELVLHVDVEHQRIPTSGVLPV"
FT   3'UTR           1914..2215
XX
SQ   Sequence 2215 BP; 513 A; 525 C; 530 G; 647 T; 0 other;
     gtaatcttac cactgtgtgt gtgcgtgtgt gtgtgtcgag tcgtgttgtc cgcacatttg        60
     agtcgtgctg tccgcacatt ttatcttatc tttgtacagt gtgttagatt tcccgaggca       120
     tggctttcca aggtaccagt aggactttaa ctcaacagtc ctcagcggct acgtctgacg       180
     atcttcaaaa gatattattt agccctgaag ccattaagaa aatggctact gagtgtgacc       240
     taggccggca tcattggatg cgcgctgata atgctatttc agtccggccc ctcgttcccg       300
     aagtaaccca cggtcgtatt gcttccttct ttaaatctgg atatgatgtt ggtgaattgt       360
     gctcaaaagg atacatgagc gtcccccaag tgttatgtgc tgttactcga acagtttcca       420
     ctgatgctga agggtccttg agaatttact tagctgatct aggtgacaag gagttatctc       480
     ctatagatgg acaatgcgtt tcgttacata accatgatct tcccgctttg gtgtctttcc       540
     aaccgacgta cgactgtcct atggaaacag ttgggaatcg caagcggtgt tttgctgtcg       600
     ttattgaaag acatggttac attgggtata ccggcaccac agctagcgtg tgtagtaatt       660
     ggcaagcagg gttttcttct aagaataaca actacactca tatcgcagct gggaagactc       720
     tagtactgcc tttcaacaga ttagctgagc aaacaaaacc gtcggctgtc gctcgcctgt       780
     tgaagtcgca attgaataac attgaatctt cgcaatatct gttaacgaac gcgaagatta       840
     atcaaaatgc gcgcagtgag tccgaggaat taaatgttga gagccctccc gccgcaatcg       900
     ggagttcttc cgcgtcccgc tccgaagcct tcagaccgca ggtggttaac ggtctttagc       960
     actttggtgc gtattagtat ataagtattt gtgagtcttt acataatact atatctatag      1020
     tgtcctgtgt gagttgatac agtagacatc tgtgacgcga tgccgtgttg agaagggaac      1080
     acatctggtt ttagtaagcc tacatcgcag ttttgaggtt caattcctct tactccctgt      1140
     tgagtccctt actttctcat ggatgcttct ccgcgagatt gcgttattgt ctactgacta      1200
     tatagagagt gtgtgtgctg tgttttctct tttgtgtcgt agaattgagt cgagtcatgg      1260
     acaaatccga atcaaccagt gctggtcgta accgtcgacg tcgtccgcgt cgcggttccc      1320
     gctccgctcc ctcctccgcg gatgctaact ttagagtctt gtcgcagcag ctttcgcgac      1380
     ttaataagac gttatcagct ggtcgtccaa ccattaacca cccaaccttt gtagggagtg      1440
     agcgctgtaa acctggatac acgttcacat ccattaccct aaagccacca aaaatagacc      1500
     gtgggtctta ttatggtaaa aggttgttat tacctgattc agtcacggaa tatgataaga      1560
     aacttgtttc gcgcattcaa attcgagtta atcctttgcc gaaatttgat tctaccgtgt      1620
     gggtgacagt ccgtaaagtt cctgcctcct cggacttatc cgttgccgcc atctctgcta      1680
     tgtttgcgga cggagcctcg ccggtattgg tttatcagta tgctgcatct ggggtccaag      1740
     ctaacaacaa actgttgtat gatctttcgg cgatgcgcgc tgatataggc gacatgagaa      1800
     agtacgccgt cctcgtgtat tcaaaagacg atgcgctcga gacggacgag ctagtacttc      1860
     atgttgacgt cgagcaccaa cgcattccca cgtctggggt gctcccagta tgattccgtg      1920
     ttttccagaa ccctccctcc gatctctgtg gcgggagctg agttggcagt tctgctataa      1980
     actgtctgaa gtcactaaac gttttacggt gaacgggttg tccatccagc ttacggctaa      2040
     aatggtcagt cgtggagaaa tccacgccag cagacttaca agtctctgag gcgcctttga      2100
     aaccatctcc taggtttctt cggaaggact tcggtccgtg tacttctagc acaatgtgct      2160
     agtttcaggg tacgggtgcc cccccacttt cgtgggggcc tctaaaagga gacca           2215
//