ID AB368500; SV 1; linear; genomic RNA; STD; VRL; 3049 BP. XX AC AB368500; XX DT 16-NOV-2008 (Rel. 97, Created) DT 18-JAN-2010 (Rel. 103, Last updated, Version 2) XX DE Cucumber mosaic virus isolate PF segment RNA2, complete sequence. XX KW . XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-3049 RA Maoka T.; RT ; RL Submitted (14-NOV-2007) to the INSDC. RL Contact:Tetsuo Maoka National Agricultural Research Center for Hokkaido RL Region, Potato Production and Protection Research Team; Hitsujigaoka, RL Toyohira, Sapporo, Hokkaido 062-8555, Japan XX RN [2] RX DOI; 10.1007/s11262-009-0414-6. RX PUBMED; 19866353. RA Maoka T., Saito-Hayano Y., Iwasaki M., Yoshida K., Masuta C.; RT "Mixed infection in tomato to ensure frequent generation of a natural RT reassortant between two subgroups of Cucumber mosaic virus"; RL Virus Genes 40(1):148-150(2010). XX DR MD5; 0e4f2b5f62fae5ba18b081d6715bfd94. DR RFAM; RF01084; TLS-PK3. XX FH Key Location/Qualifiers FH FT source 1..3049 FT /organism="Cucumber mosaic virus" FT /segment="RNA2" FT /host="Solanum lycopersicum" FT /isolate="PF" FT /serotype="P" FT /mol_type="genomic RNA" FT /country="Japan:Hokkaido, Kameda, Ohno-cho" FT /collection_date="1982" FT /note="subgroup I" FT /db_xref="taxon:12305" FT CDS 85..2658 FT /codon_start=1 FT /transl_table=1 FT /gene="2a" FT /product="2a protein" FT /db_xref="GOA:B6VQB2" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:B6VQB2" FT /protein_id="BAG84172.1" FT /translation="MAFPAPAFSLANLLNGSYGVDTPEDVERLRSEQREEAAAACRNYR FT PLPAVDVSESVTEDAHSLRTPDGAPAEAVSDEVCTYGAEDYLEKSDDELLVAFETMVKP FT MRIGQLWCPAFNKCSFISSIAMARALLLAPRTSHRTMKCFEDLVAAIYTKSDFYYDEEC FT EADDVQIDISSRDVPGYSFEPWSRTSGFEPPPICEACDMIMYQCPCFDFNALKKSCAER FT TFADDYVIEGLDGVVDNATLLSNLGPFLVPVKCQYEKCPTPTIAIPPDLNRATDRVDIN FT LVQSICDSTLPTHSNYDDSFHQVFVESADYSIDLDHVRLRQSDLIAKIPDSGHMIPVLN FT TGSGHKRVGTTKEVLTAIKKRNADVPELGDSVNLSRLSKAVAERFFISYISGNSLASSN FT FVNVVSNFHDYMEKWKSSGLSYDDLPDLHAENLQFYDHMIKSDVKPVVSDTLNIDRPVP FT ATITYHKKSITSQFSPLFTALFERFQRCLRERIILPVGKISSLEMAGFDVKNKHCLEID FT LSKFDKSQGEFHLLIQEHILNGLGCPAPVTKWWCDFHRFSYIRDRRAGVGMPISFQRRT FT GDAFTYFGNTIVTMAEFAWCYDTDQFEKLLFSGDDSLGFSLLPPVGDPSKFTTLFNMEA FT KVMEPAVPYICSKFLLSDEFGNTFSVPDPLREVQRLGTKKIPYSDNDEFLFAHFMSFVD FT RLKFLDRMSQSCIDQLSIFFELKYKKSGEEAALMLGAFKKYTANFQSYKELYYSDRRQC FT ELINSFCSTEFRVERVNSNKQRKKYGIERRCNDKRRTPTGPYGGGEEAETKVSQTESTG FT TRSQKSQRESAFKSQTVPLPTVLSSRWIGTDRVMPPCERGGVTRA" FT CDS 2417..2749 FT /codon_start=1 FT /transl_table=1 FT /gene="2b" FT /product="2b protein" FT /db_xref="InterPro:IPR004946" FT /db_xref="UniProtKB/TrEMBL:B6VQB3" FT /protein_id="BAG84173.1" FT /translation="MELNVGAMTNVELQLARMVEAKKQRRRSHRQNRRERGHKSPSERA FT RSNLRLFRFLPFYQVDGSELTGSCRHANGAELPEPEASRLELSAEDHDFDDTDWFAGNE FT WAEGAF" XX SQ Sequence 3049 BP; 777 A; 686 C; 705 G; 881 T; 0 other; gtttatttac aagagcgtac ggttcaaccc ctgcctcctc tgtaaaactc cctagatttt 60 aaatttcttt ctagtatctt tcttatggct ttccctgccc ccgcattctc actagccaat 120 cttttgaacg gcagttacgg tgtcgacact cccgaggatg tggaacgttt gcgatctgag 180 caacgcgaag aggctgctgc ggcctgtcgt aattacaggc ccctacccgc tgtggatgtc 240 agcgagagtg tcacagagga cgcacattcc ctccgaactc ctgacggagc tcccgctgaa 300 gcggtgtcag atgaagtttg tacttatggt gctgaagatt accttgaaaa atctgatgat 360 gagctccttg tcgcttttga aacaatggtc aaacctatgc gtatcggaca actatggtgc 420 cctgcgttta ataaatgttc ttttatttcc agcattgcta tggccagagc tttgctattg 480 gcacctagaa catcccaccg aaccatgaag tgttttgaag acctggtcgc ggctatttac 540 actaaatctg atttctatta cgatgaagag tgtgaagccg acgacgttca gatagatatc 600 tcgtctcgcg atgtacccgg ttattctttc gaaccgtggt cccgaacgtc tggattcgaa 660 ccgccgccca tttgtgaagc gtgcgacatg atcatgtacc agtgcccgtg ttttgatttc 720 aatgctttaa agaaatcgtg cgctgagagg actttcgctg atgattatgt tattgaaggt 780 ttagatggtg ttgttgataa tgcgactctg ttgtcgaatt tgggcccatt cttggtaccc 840 gtgaaatgtc aatatgaaaa atgtccaaca ccaaccatcg cgattcctcc ggatttaaat 900 cgtgctactg atcgtgttga tattaattta gttcaatcca tttgtgactc gactctgccc 960 actcatagta attacgacga ctcttttcat caagtgttcg ttgaaagtgc agattactct 1020 atagatctgg atcatgttag acttcgacag tctgatctca tcgcgaagat tccagattca 1080 gggcatatga taccggttct gaacaccggg agcggtcaca agagagtagg tacaacgaag 1140 gaggtcctta cagcaattaa gaaacgtaat gctgacgttc cagagctagg tgattccgtt 1200 aatctgtcta gattgagtaa agctgtggct gagagattct tcatttcata catcagtggt 1260 aactctctag catccagcaa ctttgtcaat gtcgttagta atttccacga ctacatggaa 1320 aagtggaagt cctcaggtct ttcttatgat gatcttccgg atcttcatgc tgagaatttg 1380 cagttttatg atcacatgat aaaatccgat gtgaaacctg tggtgagcga cacactcaat 1440 atcgacagac cggttccagc tactataacg tatcataaga agagtataac ctcccagttc 1500 tcaccgttat tcacagcgct atttgagcgc ttccagagat gccttcgaga acgtattatt 1560 cttcctgttg gtaagatttc atcccttgag atggcaggat ttgatgtcaa aaacaaacac 1620 tgcctcgaga ttgatctgtc taaatttgat aagtctcagg gtgaattcca tttgctaatt 1680 caggaacata ttttgaatgg tctaggatgt ccagctccgg taaccaagtg gtggtgcgat 1740 ttccaccgat tctcttacat cagagaccgt agagctggtg ttggtatgcc tattagtttc 1800 cagagacgaa ctggtgatgc attcacctat tttggcaata ccattgtcac catggctgag 1860 tttgcctggt gttatgacac cgaccaattc gaaaagcttt tattctcagg cgatgactct 1920 ctaggatttt cattgcttcc ccctgttggt gatccgagta aattcacaac tctcttcaac 1980 atggaagcta aggtgatgga acccgcagta ccatatattt gttcgaagtt cttactctct 2040 gacgagttcg gtaacacatt ttccgttcca gatccattgc gcgaggttca gcggttagga 2100 acaaagaaaa ttccctattc tgacaatgat gaattcttgt ttgctcactt catgagcttt 2160 gttgatcgat tgaagttttt ggaccgaatg tctcagtctt gtatcgatca actttcgatt 2220 ttctttgaat tgaaatacaa gaagtctggg gaagaggctg ctttaatgct aggcgccttt 2280 aagaagtata ccgctaattt tcagtcctac aaagaactct actattcaga tcgtcgacag 2340 tgcgaattga tcaattcgtt ttgtagtaca gagttcaggg ttgagcgtgt aaattccaac 2400 aaacagcgaa agaaatatgg aattgaacgt aggtgcaatg acaaacgtcg aactccaact 2460 ggcccgtatg gtggaggcga agaagcagag acgaaggtct cacagacaga atcgacggga 2520 acgaggtcac aaaagtccca gcgagagagc gcgttcaaat ctcagactgt tccgcttcct 2580 accgttctat caagtagatg gatcggaact gacagggtca tgccgccatg cgaacggggc 2640 ggagttaccc gagcctgagg cctctcgttt agagttatcg gcggaagacc atgattttga 2700 cgatacagat tggttcgccg gtaacgaatg ggcggaaggt gctttctgaa ccccccttcc 2760 gtatctccct ccggttttct gtggcgggag ctgagttggc agtattgcta taaactgtct 2820 gaagtcacta aacacattgt ggtgaacggg ttgtccatcc agcttacggc taaaatggtc 2880 agtcgtagag aaatctacgc cagcagactt acaagtctct gaggcacctt tgaaaccatc 2940 tcctaggttt cttcggaagg acttcggtcc gtgtacttct agcacaacgt gctagtttca 3000 gggtacgggt gcccccccac tttcgtgggg ggcctccaaa aggagacca 3049 //