ID AB368498; SV 1; linear; genomic RNA; STD; VRL; 2191 BP. XX AC AB368498; XX DT 05-FEB-2008 (Rel. 94, Created) DT 18-JAN-2010 (Rel. 103, Last updated, Version 2) XX DE Cucumber mosaic virus genomic RNA, segment RNA3, complete sequence, DE isolate: 42CM. XX KW . XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; OC Martellivirales; Bromoviridae; Cucumovirus. XX RN [1] RP 1-2191 RA Maoka T.; RT ; RL Submitted (14-NOV-2007) to the INSDC. RL Contact:Tetsuo Maoka National Agricultural Research Center for Hokkaido RL Region, Potato Production and Protection Research Team; Hitsujigaoka, RL Toyohira, Sapporo, Hokkaido 062-8555, Japan XX RN [2] RA Iwasaki M., Yamamoto T., Inaba T.; RT "Wilt of cucumber plants grafted on squash rootstocks caused by viruses"; RL Bull. Shikoku Natl. Agric. Exp. St 60:1-88(1996). XX RN [3] RX DOI; 10.1007/s11262-009-0414-6. RX PUBMED; 19866353. RA Maoka T., Saito-Hayano Y., Iwasaki M., Yoshida K., Masuta C.; RT "Mixed infection in tomato to ensure frequent generation of a natural RT reassortant between two subgroups of Cucumber mosaic virus"; RL Virus Genes 40(1):148-150(2010). XX DR MD5; 59637212180dce538c3f88fb2a6752cf. DR EuropePMC; PMC3550734; 23637513. DR RFAM; RF01084; TLS-PK3. XX FH Key Location/Qualifiers FH FT source 1..2191 FT /organism="Cucumber mosaic virus" FT /segment="RNA3" FT /isolate="42CM" FT /serotype="Y" FT /mol_type="genomic RNA" FT /country="Japan:Kagawa, Toyonaka" FT /isolation_source="cucumber" FT /collection_date="15-Oct-1986" FT /note="subgroup I" FT /db_xref="taxon:12305" FT CDS 98..937 FT /codon_start=1 FT /transl_table=1 FT /gene="3a" FT /product="3a protein" FT /db_xref="InterPro:IPR000603" FT /db_xref="UniProtKB/TrEMBL:B0I4W2" FT /protein_id="BAF93468.1" FT /translation="MALQGTSRTLTQQSSAATSDDLQKILFSPEAIKKMATECDLGRHH FT WMRADNAISVRPLVPEVTHGRIASFFKSGYDVGELCSKGYMSVPQVLCAVTRTVSTDAE FT GSLRIYLADLGDKELSPIDGQCVSLHNHDLPALVSFQPTYDCPMETVGNRKRCFAVVIE FT RHGYIGYTGTTASVCSNWQARFSSKNNNYTHIAAGKTLVLPFNRLAEQTKPSAVARLLK FT SQLNNIESSQYLLTNTKINQNARSESEELNVESPPAAIGSSSASRSEAFRPQVVNGL" FT CDS 1235..1891 FT /codon_start=1 FT /transl_table=1 FT /gene="CP" FT /product="coat protein" FT /db_xref="GOA:Q2L4T7" FT /db_xref="InterPro:IPR000247" FT /db_xref="InterPro:IPR023800" FT /db_xref="InterPro:IPR037137" FT /db_xref="UniProtKB/TrEMBL:Q2L4T7" FT /protein_id="BAF93469.1" FT /translation="MDKSESTSAGRNRRRRPRRGSRSAPSSSDANFRVLSQQLSRLNKT FT LAAGRPTINHPTFVGSERCKPGYTFTSITLKPPKIDRGSYYGKRLLLPDSVTEYDKKLV FT SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVAAISAMFADGASPVLVYQYAASGVQAN FT NKLLYDLSAMRADIGDMRKYAVLVYSKDDALETDELVLHVDVEHQRIPTSGVLPV" XX SQ Sequence 2191 BP; 515 A; 516 C; 518 G; 642 T; 0 other; gtaatcttac cactgtgtgt gtgcgtgtgt gtgtgtcgag tcgtgctgtc cgcacatttt 60 gttttatctt tgtacagtgt gttagatttc ccgaggcatg gctctccaag gtaccagtag 120 gactttaact caacagtcct cagcggctac gtctgacgat cttcaaaaga tattatttag 180 ccctgaagcc attaagaaga tggctactga gtgtgaccta ggccggcatc attggatgcg 240 cgctgataat gctatttcag tccggcccct cgttcccgaa gtaacccacg gtcgtattgc 300 ttccttcttt aaatctggat atgatgttgg tgaattgtgc tcaaaaggat atatgagcgt 360 ccctcaagta ttatgtgctg ttactcggac agtctctact gatgctgaag ggtccttgag 420 aatttactta gctgatctag gtgacaagga gttatctcct atagatggac aatgcgtctc 480 gttacacaac catgatcttc ctgctttagt gtctttccaa cctacgtacg actgtcctat 540 ggaaacagtt gggaatcgta agcggtgttt tgctgtcgtt atcgaaagac atggttacat 600 tgggtatacc ggtaccacag ctagcgtgtg tagtaactgg caagcaaggt tttcctctaa 660 gaataacaac tacactcata tcgcagctgg gaagactcta gtactgcctt tcaacagatt 720 agctgagcaa acaaaaccgt cagctgtcgc tcgcctgttg aagtcgcaat tgaacaacat 780 tgaatcttcg caatatctgt taacgaacac gaagattaat caaaatgcgc gcagtgagtc 840 cgaggaatta aatgttgaga gccctcccgc cgcaatcggg agttcttccg cgtcccgctc 900 cgaagccttc agaccgcagg tggttaacgg tctttagcac tttggtgcgt attagtatat 960 aagtatttgt gagtctgtac ataatactat atctatagtg tcctgtgtga gttgaaacag 1020 tagacatctg tgacgcgatg ccgtgttgag aagggaacac atctggtttt agtaagccta 1080 catcatagtt ttgaggttca attcctctta ctccctgttg agccccttac tttctcatgg 1140 atgcttctcc gcgagattgc gttattgtct actgactata tagagagtgt gtgtgctgtg 1200 ttttctcttt tgtgtcgtag aattgagtcg agtcatggac aaatctgaat caaccagtgc 1260 tggtcgtaac cgtcgacgtc gtccgcgtcg tggttcccgc tccgccccct cctcctcgga 1320 tgctaacttt agagtcttgt cgcagcagct ttcgcgactt aataagacgt tagcagctgg 1380 tcgtccaact attaaccacc caacctttgt agggagtgag cgatgtaaac ctggatacac 1440 gttcacatct attaccctaa agccaccaaa aatagaccgc gggtcttatt atggtaaaag 1500 gttgttatta cctgattcag tcacggaata tgacaagaaa cttgtttcgc gcattcaaat 1560 tcgagttaat cctttgccga aatttgattc taccgtgtgg gtgacagtcc gtaaagttcc 1620 tgcctcctcg gacttatccg ttgccgccat ctctgctatg tttgcggacg gagcctcacc 1680 ggtactggtt tatcagtatg ctgcatctgg agttcaagct aacaacaaat tgttgtatga 1740 tctttcggcg atgcgcgctg atataggcga catgagaaag tacgccgtcc tcgtgtattc 1800 aaaagacgat gcgctcgaga cggacgagtt ggtacttcat gttgacgtcg agcaccaacg 1860 cattcccacg tctggggtgc tcccagtctg attccgtgtt ttccagaacc ctccctccga 1920 tttctgtggc gggagctgag ttggcagttc tgctataaac tgtctgaagt cactaaacgt 1980 tttacggtga acgggttgtc catccagctt acggctaaaa tggtcagtcg tggagaaatc 2040 cacgccagca gatttacaaa tctctgaggc gcctttgaaa ccatctccta ggtttcttcg 2100 gaaggacttc ggtccgtgta cttctagcac aacgtgctag tttcagggta caggtgcccc 2160 ccactttcgt gggggcttcc taaggagacc a 2191 //