ID AB368497; SV 1; linear; genomic RNA; STD; VRL; 3050 BP. XX AC AB368497; XX DT 05-FEB-2008 (Rel. 94, Created) DT 18-JAN-2010 (Rel. 103, Last updated, Version 2) XX DE Cucumber mosaic virus genomic RNA, segment RNA2, complete sequence, DE isolate: 42CM. XX KW . XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-3050 RA Maoka T.; RT ; RL Submitted (14-NOV-2007) to the INSDC. RL Contact:Tetsuo Maoka National Agricultural Research Center for Hokkaido RL Region, Potato Production and Protection Research Team; Hitsujigaoka, RL Toyohira, Sapporo, Hokkaido 062-8555, Japan XX RN [2] RA Iwasaki M., Yamamoto T., Inaba T.; RT "Wilt of cucumber plants grafted on squash rootstocks caused by viruses"; RL Bull. Shikoku Natl. Agric. Exp. St 60:1-88(1996). XX RN [3] RX DOI; 10.1007/s11262-009-0414-6. RX PUBMED; 19866353. RA Maoka T., Saito-Hayano Y., Iwasaki M., Yoshida K., Masuta C.; RT "Mixed infection in tomato to ensure frequent generation of a natural RT reassortant between two subgroups of Cucumber mosaic virus"; RL Virus Genes 40(1):148-150(2010). XX DR MD5; 20eb55f784c5e94bc9b8bb6f295500f3. DR RFAM; RF01084; TLS-PK3. XX FH Key Location/Qualifiers FH FT source 1..3050 FT /organism="Cucumber mosaic virus" FT /segment="RNA2" FT /isolate="42CM" FT /serotype="Y" FT /mol_type="genomic RNA" FT /country="Japan:Kagawa, Toyonaka" FT /isolation_source="cucumber" FT /collection_date="15-Oct-1986" FT /note="subgroup I" FT /db_xref="taxon:12305" FT CDS 87..2660 FT /codon_start=1 FT /transl_table=1 FT /gene="2a" FT /product="2a protein" FT /db_xref="GOA:B0I4W0" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:B0I4W0" FT /protein_id="BAF93466.1" FT /translation="MASPAPAFSLANLLNGSYGVDTPEDVERLRSEQREEAAAACRNYR FT PLPAVDVSESVTEDAHSLRTPDGAPAEAVSDEFVTYGAEDYLEKSDDELLVAFETMVKP FT MRIGQLWCPAFNKCSFISSVAMARALLLAPRTSNRTMKCFEDLVAAIYTKSDFYYGEEC FT EADDIQMDISSRDVPGYSFEPWSRTSGFEPPPICEACDMIMYQCPCFDFNALKKSCAER FT TFADDYVIEGLDGVVDNATLLSNLGPFLVPVKCQYEKCPTPTLAIPPDLNRATDRVDIN FT LVQSICDSTLPTHSNYDDSFHQVFVESADYSIDLDHVRLRQSDLIAKIPDSGHMIPVLN FT TGSGHKRVGTTKEVLTAIKKRNADVPELGDSVNLSRLSKAVAERFFISYINGNSLASSN FT FVNVVSNFHDYMEKWKSSGLSYDDLPDLHAENLQFYDHMIKSDVKPVVSDTLNIDRPVP FT ATITYHKKSITSQFSPLFTALFERFQRCLRERIILPVGKISSLEMAGFDVKNKHCLEID FT LSKFDKSQGEFHLLIQEHILNGLGCPAPITKWWCDFHRFSYIRDRRAGVGMPISFQRRT FT GDAFTYFGNTIVTMAEFAWCYDTDQFEKLLFSGDDSLGFSLLPPVGDPSKFTTLFNMEA FT KVMEPAVPYICSKFLLSDEFGNTFSVPDPLREVQRLGTKKIPYSDNDEFLFAHFMSFVD FT RLKFLDRMSQSCIDQLSIFFELKYKKSGEEAALMLGAFKKYTANFQSYKELYYSDRRQC FT ELINSFCSTEFRVERVNSNKQRKKYGIERRCNDKRRTPTGSYGGGEEAETKVSQAESTG FT TRSQKSQRESAFKSQTVPLPTVLSSRWFGTDRVEPPCERGGVTRA" FT CDS 2419..2751 FT /codon_start=1 FT /transl_table=1 FT /gene="2b" FT /product="2b protein" FT /db_xref="InterPro:IPR004946" FT /db_xref="UniProtKB/TrEMBL:B0I4W1" FT /protein_id="BAF93467.1" FT /translation="MELNVGAMTNVELQLARMVEAKKQRRRSHRQNRRERGHKSPSERA FT RSNLRLFRFLPFYQVDGSELTGSNRHVNVAELPEPEASRLELSAEDHEFDDTDWFAGNE FT WAEGAF" XX SQ Sequence 3050 BP; 774 A; 689 C; 711 G; 876 T; 0 other; gtttatttac aagagcgtac ggttcaaccc ctgcctcctc tgtaaaactc cctagacttt 60 aaaactttct ttctagtatc ttttctatgg cttcccctgc ccccgcattc tcactagcca 120 atcttttgaa cggtagttac ggtgtcgaca ctcccgagga tgtggaacgt ttgcgatctg 180 agcaacgtga agaggctgct gcggcctgtc gtaactacag gcccctaccc gctgtggatg 240 tcagcgagag tgtcacagag gacgcgcatt ccctccgaac tcctgacgga gctcccgctg 300 aagcggtgtc agatgagttt gtaacttatg gtgctgaaga ttaccttgaa aaatctgatg 360 atgagctcct tgtcgctttt gagacgatgg tcaaacccat gcgtatcgga caactatggt 420 gccccgcgtt taataaatgt tcttttattt ccagcgttgc tatggccaga gctttgctgt 480 tggcacctag aacatccaac cgaaccatga agtgttttga agacctggtc gcggctattt 540 acactaaatc tgatttctat tatggtgaag agtgtgaagc cgacgacatt cagatggata 600 tctcgtctcg cgatgtaccc ggttattctt tcgaaccgtg gtcccgaacg tctggattcg 660 aaccgccgcc catttgtgaa gcgtgcgaca tgatcatgta ccagtgcccg tgtttcgatt 720 tcaatgcttt aaagaaatcg tgcgctgaga ggactttcgc tgatgactat gttattgaag 780 gtttagatgg tgttgttgat aatgcgactc tgttgtcgaa tttgggtcca tttttggtac 840 ccgtgaagtg tcaatatgaa aaatgtccaa caccaaccct cgcgattcct ccggatttaa 900 atcgtgctac tgatcgtgtt gatatcaatt tagttcaatc catttgtgac tcgactctgc 960 ccactcatag taattacgat gactcttttc atcaagtgtt cgtcgaaagt gcggactact 1020 ctatagatct ggatcatgtt agacttcggc agtctgatct tatcgcaaaa attccagatt 1080 cagggcatat gataccggtt ctgaacaccg ggagcggtca caagagagta ggtacaacga 1140 aggaggtcct tacagcaatt aagaaacgta atgctgacgt tccagagcta ggtgattccg 1200 ttaacctgtc tagattgagt aaagctgtgg ctgagagatt cttcatttca tacatcaatg 1260 gtaactctct agcgtccagt aactttgtca atgtcgttag taacttccac gattacatgg 1320 aaaagtggaa gtcctcaggt ctttcttacg atgatctccc agatcttcat gctgagaatc 1380 tgcagtttta tgatcacatg ataaaatctg atgtgaaacc tgtggtgagc gacacactca 1440 atatcgacag accggttcca gctactataa cgtatcataa gaagagtata acctcccagt 1500 tctcaccgtt attcacagcg ctattcgagc gcttccagag atgccttcga gaacgtatta 1560 ttcttcctgt tggtaagatt tcatcccttg agatggcagg atttgatgtc aaaaacaaac 1620 actgcctcga aattgatctg tctaagtttg ataagtctca aggtgaattt catttgctaa 1680 ttcaggaaca cattttgaat ggtctaggat gtccagctcc gataactaaa tggtggtgtg 1740 attttcaccg attctcttac atcagagacc gtagagctgg tgttggtatg cctattagtt 1800 tccaaagacg aactggtgat gcattcactt attttggcaa taccattgtc accatggcag 1860 agtttgcctg gtgttacgac accgaccaat tcgaaaagct tttattctcg ggcgacgact 1920 ctctaggatt ttcattgctt ccccctgttg gtgatccgag taaatttaca actcttttca 1980 acatggaagc taaggtgatg gaacctgcag taccatatat ttgttcgaag ttcttactct 2040 ctgacgagtt cggtaacaca ttttccgttc cagatccatt gcgcgaggtt cagcggttag 2100 gaacaaagaa aattccctat tctgacaatg atgaattctt gtttgctcac ttcatgagct 2160 ttgttgatcg attgaagttt ttggaccgaa tgtctcagtc gtgtatcgat caactttcga 2220 ttttcttcga attgaaatac aagaagtctg gggaagaggc tgctttaatg ctaggcgcct 2280 ttaagaaata taccgctaat tttcagtcct acaaggaact ctattattca gatcgtcgtc 2340 agtgcgaatt gatcaattcg ttttgtagta cagagttcag ggttgagcgt gtaaattcca 2400 ataagcagcg aaagaaatat ggaattgaac gtaggtgcaa tgacaaacgt cgaactccaa 2460 ctggctcgta tggtggaggc gaagaagcag agacgaaggt ctcacaggca gaatcgacgg 2520 gaacgaggtc acaaaagtcc cagcgagaga gcgcgttcaa atctcagact gttccgcttc 2580 ctaccgttct atcaagtaga tggttcggaa ctgacagggt cgaaccgcca tgtgaacgtg 2640 gcggagttac ccgagcctga ggcctctcgt ttagagttat cggcggaaga ccatgagttt 2700 gacgatacag attggttcgc cggtaacgaa tgggcggaag gtgctttctg aaacctcccc 2760 ttccgcaact cccccccggt cctgtggcgg gagctgagtt ggcagtattg ctataaactg 2820 tctgaagtca ctaaacacat tgtggtgaac gggttgtcca tccagcttac ggctaaaatg 2880 gtcagtcgtg gagaaatcca cgccagcaga cttacaagtc tctgaggcac ctttgaaacc 2940 atctcctagg tttcttcgga aggacttcgg tccgtgtact tctagcacaa cgtgctagtt 3000 tagggtacgg gtgccccccc actttcgtgg gggcctccaa aaggagacca 3050 //