ID   AB364946; SV 1; linear; genomic RNA; STD; VRL; 1289 BP.
XX
AC   AB364946;
XX
DT   18-OCT-2008 (Rel. 97, Created)
DT   12-MAR-2009 (Rel. 100, Last updated, Version 3)
XX
DE   Potato virus S CP, 11K genes for coat protein, 11K protein, complete cds,
DE   isolate: PVS6-2.
XX
KW   .
XX
OS   Potato virus S
OC   Viruses; Riboviria; Tymovirales; Betaflexiviridae; Quinvirinae; Carlavirus.
XX
RN   [1]
RP   1-1289
RA   Chikh Ali M.S., Maoka T., Natsuaki K.T.;
RT   ;
RL   Submitted (18-OCT-2007) to the INSDC.
RL   Contact:Mohamad S Chikh Ali Laboratory of Plant Pathology, Faculty of
RL   Agriculture, Utsunomiya University; Mine-machi 350, Utsunomiya 321-8505,
RL   Japan
XX
RN   [2]
RX   DOI; 10.1007/s11540-008-9099-9.
RX   AGRICOLA; IND44104650.
RA   Chikh Ali M., Maoka T., Natsuaki K.T.;
RT   "The Occurrence of Potato Viruses in Syria and the Molecular Detection and
RT   Characterization of Syrian Potato virus S Isolates";
RL   Potato Res 51(2):151-161(2008).
XX
DR   MD5; ec471a676e30482d2f337c14292f3427.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1289
FT                   /organism="Potato virus S"
FT                   /host="Solanum tuberosum cv. Marfona"
FT                   /isolate="PVS6-2"
FT                   /mol_type="genomic RNA"
FT                   /country="Syria:Hama"
FT                   /collected_by="Mohamad Chikh Ali"
FT                   /collection_date="08-Sep-2006"
FT                   /identified_by="Mohamad Chikh Ali"
FT                   /db_xref="taxon:12169"
FT   CDS             114..998
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:B6EWZ8"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="InterPro:IPR013569"
FT                   /db_xref="UniProtKB/TrEMBL:B6EWZ8"
FT                   /protein_id="BAG75119.1"
FT                   /translation="MPPKPDPTSSGETPQTVPLAPPPRNVEEHRVGPNQGHGQNEEAML
FT                   EQRLIRLIELMASKRHNSTLSNISFEIGRPSLEPTPEMRRNPENPYSRFSIDELFKMEI
FT                   RSVSNNMANTEQMAQITADIAGLGVPTEHVAGVILKVVIMCASVSSSVYLDPAGTVEFP
FT                   TGAVPLDSIIAIMKNRAGLRKVCRLYAPVVWNYMLVQNRPPSDWQAMGFQWNARFAAFD
FT                   TFDYVTNGAAIQPVEGLIRRPTPEETIAHNAHKSMAIDKSNRNERLANTNVEYTGGMLG
FT                   AEIVRNHRNAINQ"
FT   CDS             995..1279
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="11K"
FT                   /product="11K protein"
FT                   /db_xref="GOA:B6EWZ9"
FT                   /db_xref="InterPro:IPR002568"
FT                   /db_xref="UniProtKB/TrEMBL:B6EWZ9"
FT                   /protein_id="BAG75120.1"
FT                   /translation="MKADRLATLLLCVHRLGYVLPVEICVNIISLSAGPVSGGRSTYAR
FT                   KRRARSIGRCWRCYRVYPPICNSKCDNRTCRPGISQNYKVVTFIRGWSN"
XX
SQ   Sequence 1289 BP; 352 A; 290 C; 351 G; 296 T; 0 other;
     ctagtcaatt gcgagctcac aagagattta gtggaagccg tagcaacatt ggggccgttg        60
     aagcaccttt aggttcacag gtaagagttc gaagaaactg tcccacagag aaaatgccgc       120
     ccaaaccgga tccgacaagc tcaggagaga caccacaaac tgtgccgctt gcgccgccgc       180
     ccaggaacgt agaggagcat agagttggcc caaatcaagg gcacgggcag aatgaagagg       240
     ctatgctgga gcagaggctc atcaggttga ttgaactcat ggcctcgaaa aggcacaatt       300
     ctacattgag caacatctct tttgagatag gtaggccctc acttgagccg acccctgaaa       360
     tgcggaggaa tccggagaac ccatactcgc ggttttcaat agatgagctg ttcaagatgg       420
     aaatccgatc tgtgtccaac aacatggcga acaccgagca aatggcacaa atcactgctg       480
     acatcgctgg acttggggtc cccactgaac atgttgcagg ggtcatactg aaagtggtga       540
     tcatgtgtgc aagcgtgagt agctctgttt atctagatcc agcagggact gtggagttcc       600
     caacaggcgc agtgcccttg gactcgatca ttgcaattat gaagaatcgc gcgggattga       660
     ggaaagtgtg caggctgtat gctccagtcg tgtggaatta catgctagtc cagaataggc       720
     caccttcgga ttggcaggct atgggattcc aatggaatgc acgcttcgcc gcatttgaca       780
     cattcgatta tgtgactaat ggggctgcaa tccagcccgt agaggggctc atacgtaggc       840
     ccacacctga ggaaacaata gctcacaatg cccacaagag tatggcgatt gacaagtcga       900
     acagaaatga gcgattggcc aacactaatg ttgagtacac tggaggaatg cttggcgctg       960
     agattgtgcg caatcaccgt aatgcgatca accaatgaag gcagaccgtt tagccacgtt      1020
     attattgtgt gtccatcgac tgggatatgt gttgccagtt gaaatttgtg taaatataat      1080
     aagcctaagc gcaggtccag tttctggggg tcgttccact tacgctcgta agcggagggc      1140
     ccgcagcatt gggcgatgct ggcgatgtta tcgtgtctat ccacctattt gtaattctaa      1200
     gtgtgataat aggacatgcc gtccaggcat tagtcaaaat tataaagtag tgactttcat      1260
     tcggggttgg agtaactgag gtgatacca                                        1289
//