ID   AB364945; SV 1; linear; genomic RNA; STD; VRL; 1289 BP.
XX
AC   AB364945;
XX
DT   18-OCT-2008 (Rel. 97, Created)
DT   12-MAR-2009 (Rel. 100, Last updated, Version 3)
XX
DE   Potato virus S CP, 11K genes for coat protein, 11K protein, complete cds,
DE   isolate: PVS3-5.
XX
KW   .
XX
OS   Potato virus S
OC   Viruses; Riboviria; Tymovirales; Betaflexiviridae; Quinvirinae; Carlavirus.
XX
RN   [1]
RP   1-1289
RA   Chikh Ali M.S., Maoka T., Natsuaki K.T.;
RT   ;
RL   Submitted (18-OCT-2007) to the INSDC.
RL   Contact:Mohamad S Chikh Ali Laboratory of Plant Pathology, Faculty of
RL   Agriculture, Utsunomiya University; Mine-machi 350, Utsunomiya 321-8505,
RL   Japan
XX
RN   [2]
RX   DOI; 10.1007/s11540-008-9099-9.
RX   AGRICOLA; IND44104650.
RA   Chikh Ali M., Maoka T., Natsuaki K.T.;
RT   "The Occurrence of Potato Viruses in Syria and the Molecular Detection and
RT   Characterization of Syrian Potato virus S Isolates";
RL   Potato Res 51(2):151-161(2008).
XX
DR   MD5; 667c19a80ad28017f2a8e16c730c0386.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1289
FT                   /organism="Potato virus S"
FT                   /host="Solanum tuberosum"
FT                   /lab_host="Nicotiana debneyi"
FT                   /isolate="PVS3-5"
FT                   /mol_type="genomic RNA"
FT                   /country="Syria:Aleppo"
FT                   /collected_by="Mohamad Chikh Ali"
FT                   /collection_date="07-Sep-2006"
FT                   /identified_by="Mohamad Chikh Ali"
FT                   /db_xref="taxon:12169"
FT   CDS             114..998
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:B6EWZ6"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="InterPro:IPR013569"
FT                   /db_xref="UniProtKB/TrEMBL:B6EWZ6"
FT                   /protein_id="BAG75117.1"
FT                   /translation="MPPKPDPTSSGETPQAIPLVPPPRNVEEHRVGPSEGPRQNEEAML
FT                   EQRLIRLIELMASKRHNSTLSNISFEIGRPSLEPTPEMRRNPENPYSRFSIDELFKMEI
FT                   RSVSNNMANTEQMAQITADIAGLGVPTEHVAGVILKVVIMCASVSSSVYLDPAGTVEFP
FT                   TGAVPLDSIIAIMKNRAGLRKVCRLYAPVVWNYMLVQNRPPSDWQAMGFQWNARFAAFD
FT                   TFDYVTNGAAIQPVEGLIRRPTPEETIAHNAHKSMAIDKSNRNERLANTNVEYTGGMLG
FT                   AEIVRNHRNAINQ"
FT   CDS             995..1279
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="11K"
FT                   /product="11K protein"
FT                   /db_xref="GOA:B6EWZ7"
FT                   /db_xref="InterPro:IPR002568"
FT                   /db_xref="UniProtKB/TrEMBL:B6EWZ7"
FT                   /protein_id="BAG75118.1"
FT                   /translation="MKADRLAMLLLCVYRLGYILPVEVCVNIISLSAGPVSGGRSTYAR
FT                   KRRARSIGRCWRCYRVYPPICNSKCDNRTCRPGISQNYKVVTFIRGWSN"
XX
SQ   Sequence 1289 BP; 351 A; 287 C; 349 G; 302 T; 0 other;
     ctagtcaatt gcgagctcac aagagattta gaggaagctg tagcaacatt gaggccgttg        60
     aagcaccttt aggttcacag gtaagagttc gaagaaactg tcccacagag aaaatgccgc       120
     ccaaaccgga tccaacaagc tcaggagaaa caccacaggc aataccgctt gtgccgccgc       180
     cccggaatgt agaggagcat agagttggcc caagtgaagg acctaggcag aatgaagagg       240
     ccatgctgga gcagaggctc atcagattga ttgaactcat ggcctcgaaa aggcacaatt       300
     caacattgag caacatctct ttcgagatag gtaggccctc gcttgagccg acccctgaga       360
     tgcggaggaa tccggagaat ccatactcgc ggttttcgat cgatgagctg ttcaagatgg       420
     aaatccgatc tgtgtccaat aacatggcga acaccgagca aatggcgcaa attactgctg       480
     acatcgctgg acttggggtc cctactgaac acgttgctgg ggttatactg aaagtggtga       540
     tcatgtgcgc aagcgtgagt agctctgttt atctagaccc agctgggacc gtggagttcc       600
     caacaggcgc agtgcccttg gactcgatca ttgcaatcat gaagaatcgc gcgggattga       660
     gaaaagtgtg caggctgtat gctccagtcg tgtggaatta catgctagtt cagaataggc       720
     caccttcgga ttggcaggcc atgggatttc aatggaatgc acgcttcgcc gcatttgaca       780
     catttgatta tgtgactaat ggggcagcaa ttcagcccgt agaggggctc atacgcaggc       840
     ccacacctga ggaaacaata gctcacaatg cccacaagag tatggcaatt gacaagtcga       900
     acagaaatga gcgcttggcc aacactaatg ttgagtacac tggagggatg cttggcgctg       960
     agattgtgcg caatcaccgt aatgcgatca accaatgaag gcagaccgtt tagctatgtt      1020
     gttattgtgt gtctatcgac tgggatatat cttgccagtt gaagtttgtg taaatataat      1080
     aagcctaagc gcaggtccag tttctggggg tcgttccact tacgctcgta agcggagggc      1140
     ccgcagcatt gggcgttgct ggcgatgtta tcgtgtctat ccacctattt gtaattctaa      1200
     gtgtgataat agaacatgcc gtccaggcat tagtcaaaat tataaagtag tgactttcat      1260
     tcggggttgg agtaactgag gtgatacca                                        1289
//