ID AB360790; SV 1; linear; genomic RNA; STD; VRL; 6102 BP. XX AC AB360790; XX DT 01-MAR-2008 (Rel. 95, Created) DT 01-MAR-2008 (Rel. 95, Last updated, Version 1) XX DE Plantago asiatica mosaic virus genomic RNA, complete genome, strain: Li1. XX KW . XX OS Plantago asiatica mosaic virus OC Viruses; Riboviria; Tymovirales; Alphaflexiviridae; Potexvirus. XX RN [1] RP 1-6102 RA Namba S., Oshima K., Yamaji Y., Komatsu K., Kagiwada S.; RT ; RL Submitted (09-SEP-2007) to the INSDC. RL Contact:Shigetou Namba The University of Tokyo, Graduate School of RL Agricultural and Life Sciences, Department of Agricultural and RL Environmental Biology, Laboratory of Plant Pathology; 1-1-1 Yayoi, RL Bunkyo-ku, Tokyo 113-8657, Japan XX RN [2] RX DOI; 10.1007/s00705-007-1078-y. RX PUBMED; 17987351. RA Komatsu K., Yamaji Y., Ozeki J., Hashimoto M., Kagiwada S., Takahashi S., RA Namba S.; RT "Nucleotide sequence analysis of seven Japanese isolates of Plantago RT asiatica mosaic virus (PlAMV): a unique potexvirus with significantly high RT genomic and biological variability within the species"; RL Arch. Virol. 153(1):193-198(2008). XX DR MD5; cc90494f51a2bb31153a86f1b4309379. XX FH Key Location/Qualifiers FH FT source 1..6102 FT /organism="Plantago asiatica mosaic virus" FT /strain="Li1" FT /mol_type="genomic RNA" FT /db_xref="taxon:28354" FT CDS 87..4229 FT /codon_start=1 FT /transl_table=1 FT /gene="RdRp" FT /product="RNA-dependent RNA polymerase" FT /db_xref="GOA:B1B573" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:B1B573" FT /protein_id="BAG12123.1" FT /translation="MSNVRNVFAQLTDPSLKAVIQDEAYRHLKRELAQTRHNNPFAQTP FT EAADALEALGINSHPYAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRH FT FHRGPTHGDHFLNAHVEPKDVPRYPQDTIIKRLENIPTSIAFMGDTLHFLSPSFVTALF FT AHSPKLQTLYATLVLPPEALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHNYSQL FT EWLTVGHLTTPGQITVTAQRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFL FT PAKYNCRTPISKTIMMQMFFYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVN FT YFEFTASLDSHTCFEDILSGNLLQRMLRPLRSGLTQLLDFFRGRPSFVKLIKALDWQPI FT TLEFPVRKVNTHLRGAPGFDSPFARPQPVNPDDAETTQSFQAFCQATATVEATLAQQSE FT TPDEHQSLSLKCSTLPEHQLWALHELGNARCGGPLLPKGPAKLTRAEPCPDLPAEPQAV FT PEPPHKTTQSSDLPHPQDPSTLPWVAWLPKLNALGFEALEIQTDPSTGEMIMPITDTRE FT LPRADGHAHWQGPDMERILSTLRGLNRYPTPWNPDRARAKAFTSDVKNSRTGKALHRES FT QVWKETQTMLTENSQTNLAISVIHGAGGSGKSQALQTLLRQYPNLPIEVVLPTNELRLD FT WLKKLPHNPPEQFRTFERAFVCSRCPVVIFDDYGKLPQGYLEAFAMTHASLELVILTGD FT PRQSTHHESNEEALISKLPPATAIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKV FT TYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEV FT LYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFTAIPAEAKRV FT APPCTHFPVEDGTTTLDDFKEELRDKFDREIFNPAHGHTNCVQTDDPTTQLFSHQQAKD FT EALLWETINARLTLSNPEANLAEFRAKKDLGDILWENYRKAMKLPSEQPDFSEDLWIRC FT AEEVQNTYLKKSVSQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIA FT SFQQHAVMLYGTMARYMRRFRDALRPNNIMINCEKTPQDLSRWVLNCWDFSKPSYANDF FT TAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFMGTLTIMRLTGEGPTFD FT ANTECNIAYTHTRFDIPEGTAQIYAGDDCAIAQVCPEKPSFSLLKNRIALQAKPAYTPQ FT ERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAITNVVANYSLDAKLAY FT SLGDDLQDLLSPHQARLHQVTVRDLVKFGGSSFLNSD" FT CDS 4231..4923 FT /codon_start=1 FT /transl_table=1 FT /gene="TGBp1" FT /product="triple gene block protein1" FT /db_xref="GOA:B1B574" FT /db_xref="InterPro:IPR027351" FT /db_xref="UniProtKB/TrEMBL:B1B574" FT /protein_id="BAG12124.1" FT /translation="MDIVISALTSNDFQRTNIPISKPLVVHAVAGAGKTTLIQNLLPDH FT PNLSAQTAGTPQSPNLTGAYIRKLTCPESNKLNLLDEYAALQPLKGSWDVVLADPLQHS FT GLALRPHFVKSISHRLCPETTKLISKLICPCSSSRSDTSSIQFSGLFEGPLLGTIIALD FT STTQALLQAHGAPFLCPTAALGLEFDTVTVVSATPLADVQDKVGLYISLSRHRAQLHVR FT SPPPHPTY" FT CDS 4889..5221 FT /codon_start=1 FT /transl_table=1 FT /gene="TGBp2" FT /product="triple gene block protein2" FT /db_xref="GOA:B1B575" FT /db_xref="InterPro:IPR001896" FT /db_xref="UniProtKB/TrEMBL:B1B575" FT /protein_id="BAG12125.1" FT /translation="MSGAHHLTPPTDYGKPVLAVSIGISLALLVYSATRSTLPHVGDNL FT HALPHGGRYVDGTKSISYFSPNHSKSRDPLPLAFLTVLILSGLILLLSRRGRHTTHCPC FT CGKSHA" FT CDS 5025..5390 FT /codon_start=1 FT /transl_table=1 FT /gene="TGBp3" FT /product="triple gene block protein3" FT /db_xref="GOA:B1B576" FT /db_xref="InterPro:IPR003411" FT /db_xref="UniProtKB/TrEMBL:B1B576" FT /protein_id="BAG12126.1" FT /translation="MHSHTEAGTSTEPSPSVTSAPTTPSPGTHFHSPFSQSSSSRDSYF FT YYLAAAATLLTALAVVSLTPKPGCTVVITGHSTIIQGQCDFRPELVLAAHPRGLSLELF FT AKFKQTLHHGTQPSSDL" FT CDS 5362..5985 FT /codon_start=1 FT /transl_table=1 FT /gene="CP" FT /product="coat protein" FT /db_xref="GOA:B1B577" FT /db_xref="InterPro:IPR000052" FT /db_xref="UniProtKB/TrEMBL:B1B577" FT /protein_id="BAG12127.1" FT /translation="MALNQAPTSDALNAMTFAVSSPSVPTAEELATITQGLTTLGVPAD FT SLLSHALAVVNACFDAGSSAFVTLSGPSPTATISLAQIAGVVKVTTTLRKFCRFYAKII FT WNARLSRNLPPAGFARANIKFEHRWAGFDFFDGLLNPAALEPIGGLTRTPTPDEVTANE FT TARSLNLFEARASSSNLASTSTQFTRGHLSNTAPQVQFLPSPSD" XX SQ Sequence 6102 BP; 1544 A; 2232 C; 1236 G; 1090 T; 0 other; gaaaacaaac ctacacaaac caaacgtcaa cagacataca cggccaaaca gtggtaaccg 60 atttgctcga aagctaggtt aacggtatgt caaacgttcg gaacgtcttc gcccaactca 120 cagacccctc cctgaaagcc gtcatccaag atgaagccta caggcaccta aaacgtgagc 180 tagcacaaac ccgtcacaac aacccctttg cccaaacacc tgaagctgcc gacgcgcttg 240 aggcactcgg tatcaactcc cacccctacg ccatcacccc ccacacccac gccgccgcca 300 aggcaattga gtccgacctc tacgaggtag tttcccacta cctcccaaaa gagaaccccg 360 tctccttcct cttcatgaaa cccgccaagc tcagacactt ccaccgagga cccactcacg 420 gggaccactt cctcaacgcc cacgtggaac ccaaagatgt acccagatac ccacaggaca 480 cgatcatcaa acgcctggaa aacatcccca ccagcatagc cttcatgggg gacacccttc 540 acttcctcag cccatccttc gtcaccgccc tcttcgcaca ctccccaaaa ctccagaccc 600 tgtacgcgac actcgtcctt cccccagaag ccctctacag actcaggtca ctctacccgc 660 aaatctacac actgacctac tccgaggacg ggttcatgta catcccgggt ggccatgcgg 720 gcgcttcgta cttccacaat tactcccagc tcgaatggct cacagtggga cacctcacca 780 cccccggaca aatcaccgtg accgcccaaa ggctggaaac caagggggcg aaccaccttt 840 tcatcttcca aaggggcaac tacctcaccc ctgaaagacg taccttcacc accacggaac 900 actacgtcac tgtcccggac atcttcctcc cagccaagta caactgcaga acgcccattt 960 ccaagacaat catgatgcag atgttcttct acattaagtc cgtcaaggag gctaaagagc 1020 gtgacatctg ggcaaaattc agacagctca tcagcaccaa ggagctccaa cattaccagc 1080 catccgagat caccctgctg gtcaactact tcgaattcac cgcctccctg gattcccaca 1140 catgcttcga agacatactt tccgggaatc tcctacagcg aatgctccgg ccgctgaggt 1200 caggcctcac acaactgctg gacttcttca gagggcgccc ctccttcgtc aaactaatca 1260 aggccctaga ctggcaaccc atcaccttgg aatttcccgt acggaaggtc aacacccacc 1320 tccggggtgc cccagggttc gacagcccat ttgcacgacc ccaaccggtg aatcccgacg 1380 acgcagagac cacccaaagc ttccaagcct tttgccaggc caccgctact gttgaggcaa 1440 ccctggcaca gcaatccgag acgcccgatg agcaccaaag cctcagcctc aaatgctcca 1500 cccttccgga acaccagctc tgggccctgc atgaacttgg aaacgcaaga tgcgggggcc 1560 cactcctacc aaagggacct gccaaactca caagggcgga gccctgcccg gacctccccg 1620 cagagcccca agcagtccca gagcccccgc ataaaaccac ccagagttca gacctccccc 1680 acccccaaga cccctccacc cttccctggg tcgcttggct ccctaaactc aacgccctag 1740 gcttcgaagc cctcgagatt cagacagacc cgtccacggg agagatgatc atgccaatca 1800 ctgacacaag agagcttccc agagcagacg gccacgctca ctggcaaggc ccagacatgg 1860 agcggatcct ctccaccctc cgaggcctca acaggtaccc cacaccgtgg aaccctgacc 1920 gagccagagc caaggccttc acctccgacg ttaaaaattc ccgaaccggc aaggcactgc 1980 accgggagtc acaagtctgg aaggaaaccc aaacgatgtt aacggaaaac tcgcagacca 2040 acctcgccat ctctgtcatc catggcgcag gaggctcagg caaaagccag gccctccaaa 2100 cactcctccg gcagtacccc aaccttccca tcgaggtcgt ccttccaacc aacgagctca 2160 ggctggactg gctaaagaag ctcccccaca acccccctga acaattcaga acgttcgaga 2220 gagccttcgt ctgctcccga tgccccgtgg tcatatttga cgactacggc aagctccccc 2280 agggctacct tgaggccttc gccatgacgc atgcaagcct cgaacttgtt atcctcacgg 2340 gggaccccag acagtcgacc caccacgagt ccaacgagga agctctaatt tccaagctcc 2400 cacccgcaac tgcaatattc tcggagcttt cgcgttacta catcaatgcc acccaccgaa 2460 actcaaagtt cctagcgaac aaactgggtg tctactcctc aaactcctgt ccactcaaag 2520 tcacatatgg cttccagcca caaccggggc ttcacctcct ggtcccctca cttgtcaaga 2580 aagcggcctt cactgacgcg ggccacaaag tctccacata tgccggctgc caaggcatta 2640 ctgccccgag ggtgcagatc ctcctcgaca acgatacaac catgtgcacc aaggaggtgt 2700 tgtacactgc actctctcgc gcagttgaca gcatacactt tgtgaactcc aacgcccaat 2760 ccagcgcgtt ctgggaaaag ctcgaggcca caccctacct gaaaaccttt ctcagtctgg 2820 tccgcgaaga caaaattgag gagttcacgg ccattcccgc cgaggccaaa cgtgtggccc 2880 ccccatgcac acacttcccc gtcgaggacg gcacaaccac cttggacgac ttcaaagaag 2940 agcttcgcga caagttcgac cgggaaatct tcaacccggc acatggacac acgaattgcg 3000 tccaaactga cgaccccacc acacagttat tctcccacca acaggcaaaa gacgaggcac 3060 tcctctggga aaccatcaat gcacgcctga ccctctccaa tccagaggcc aacctcgcgg 3120 aattccgagc caagaaagac ctgggcgaca tactgtggga gaactaccga aaagccatga 3180 aactgccgag cgaacaaccg gacttctccg aagatctctg gatccggtgt gcggaagagg 3240 tccagaacac gtacctgaaa aagtcggtgt cccaaatcaa aggtggcgaa cgccgacaat 3300 ccccagactt ccatgagcac cagatcctaa tcttcctcaa gtcacaatgg gtcaagaaga 3360 tggagaagct cggcgcaaag aaaatcaaac ccggccaaac catcgcctcc tttcaacagc 3420 atgcggtgat gctgtacggc accatggcgc gatacatgag aagattccga gacgccctga 3480 ggcccaacaa catcatgata aactgcgaga aaacgcccca ggacctctcc cggtgggtcc 3540 tcaactgctg ggacttctcc aaaccatcat acgccaatga cttcaccgcc ttcgaccaat 3600 cacaggacgg ggccatgctg cagttcgaaa ttcttaaggc aaaatacttt aacctcccgg 3660 aatgggtcat agaaggctac ttggacatca aactctcccc aaaaattttc atgggcacct 3720 tgacaatcat gagactaacc ggtgagggcc ccacgtttga tgccaacacg gagtgcaaca 3780 tagcctacac ccacacccgg ttcgacattc cagaaggcac agcccaaatc tacgcaggag 3840 acgactgtgc catagcccag gtatgcccag aaaaaccctc attctccctg ctgaagaacc 3900 ggatcgccct tcaagcaaaa cctgcctaca ccccccagga gagaggccag tgggctgagt 3960 tctgtggtta cctgatcacg ccaaagggcc tcatcaaaga ccccctcaag ctccacgctt 4020 ccttggagct cgccaaggcc cagaagaagg cgggcgtcaa agacgcaatt acgaacgtcg 4080 tggccaacta cagcctcgac gccaagctag cctactctct cggcgacgac ctccaagacc 4140 tcctctctcc acatcaagca cgcctccacc aggtaacggt tcgtgattta gttaagttcg 4200 gtggttcatc tttccttaac tccgattaac atggacatag tcatctcagc cctaacatct 4260 aacgactttc agagaactaa catacccatc tccaagcccc ttgtcgtcca cgctgtagcc 4320 ggcgcgggga aaaccacact catccaaaac ctcttacctg accaccccaa cctctccgcc 4380 cagaccgcag gaaccccaca gtctccaaat ctaaccgggg cctacatccg aaagctcacc 4440 tgcccagaat ctaacaaact caacctcctc gacgagtacg ccgccctcca gccactcaaa 4500 ggctcctggg acgtggtgct cgctgacccg ctccaacact caggccttgc actcagaccc 4560 catttcgtaa aatcaatcag tcaccgcctc tgcccagaga ccaccaaact catctccaaa 4620 ctcatctgcc cctgctcctc cagccgctca gacacatctt ccatccagtt ctccggactg 4680 ttcgaggggc ccctcctagg cacaatcatc gccctcgact cgaccaccca agccctcctt 4740 caagcccacg gagcgccctt cctctgcccc accgccgccc ttggtctcga gtttgacacg 4800 gttaccgtcg tctccgccac accactagcg gacgtccagg acaaggtcgg actctacatc 4860 agcctctcca gacaccgagc ccaactacat gtccggagcc caccacctca ccccacctac 4920 tgactacggc aaacccgtcc tcgcagtctc cataggaatt tccctagcac tcttagtcta 4980 ctccgccacc aggtccacac tcccccacgt cggcgacaac cttcatgcac tcccacacgg 5040 aggccggtac gtcgacggaa ccaagtccat cagttacttc agccccaacc actccaagtc 5100 ccgggaccca cttccactcg cctttctcac agtcctcatc ctctcgggac tcatacttct 5160 actatctcgc cgcggccgcc acactactca ctgcccttgc tgtggtaagt ctcacgccta 5220 aaccaggctg caccgtcgtc atcacaggac actccacgat catccaaggc cagtgcgact 5280 tccgcccgga gctagtcctc gccgcccacc ctagaggctt aagtttggaa ctcttcgcga 5340 aattcaaaca aactctccac catggcactc aaccaagctc cgacctctga cgccctcaac 5400 gcgatgacct tcgccgtctc atccccgtcc gtccccactg ccgaggaact agccacaatc 5460 acccaaggct taacgaccct cggcgttccc gccgactctc tgctcagcca cgccctcgcc 5520 gtggtcaacg cctgcttcga cgcgggctcc tctgccttcg tcaccctcag cggaccaagc 5580 cccacagcca ccatttccct cgcccaaatc gccggcgtcg tgaaagtcac caccacgcta 5640 cggaagtttt gccgcttcta cgccaaaatc atctggaacg caagactctc cagaaacctc 5700 ccaccggcgg gtttcgcccg ggcaaacatc aagttcgagc accgctgggc aggcttcgac 5760 ttcttcgatg gccttctcaa ccccgcggct ctcgaaccca tcggcgggct tacccgaacc 5820 cccacacccg acgaagtcac cgccaacgag acggcaaggt ccctgaacct tttcgaggct 5880 cgcgccagca gctccaacct cgcctcaact tccacccagt tcacccgtgg tcatctctct 5940 aacacagctc cacaggtcca attcctcccc tccccctccg actagtctag aaccgtggaa 6000 agactttaaa gagtccacgt attgccaaac ttaaccagct ctcgccccgg tgtgtatttt 6060 accgttttaa taagcctaca accagtgaaa gtctggtggg cc 6102 //