ID   AB353119; SV 1; linear; genomic RNA; STD; VRL; 1167 BP.
XX
AC   AB353119;
XX
DT   29-JAN-2008 (Rel. 94, Created)
DT   02-FEB-2009 (Rel. 99, Last updated, Version 4)
XX
DE   Watermelon mosaic virus gene for NIb-CP precursor, partial cds.
XX
KW   .
XX
OS   Watermelon mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1167
RA   Fuji S., Yamamoto H.;
RT   ;
RL   Submitted (26-JUL-2007) to the INSDC.
RL   Contact:Shin-ichi Fuji Akita Prefectural University, Bioresource Sciences;
RL   Shimoshinjo, Akita, Akita 010-0195, Japan
XX
RN   [2]
RX   DOI; 10.1007/s10327-008-0081-9.
RX   AGRICOLA; IND44037160.
RA   Yamamoto H., Fuji S.;
RT   "Rapid determination of the nucleotide sequences of potyviral coat protein
RT   genes using semi-nested RT-PCR with universal primers";
RL   J. Gen. Plant Pathol. 74(2):97-100(2008).
XX
DR   MD5; 2d4520c17c381a1ecef1840232e8af15.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1167
FT                   /organism="Watermelon mosaic virus"
FT                   /isolate="S96-6"
FT                   /mol_type="genomic RNA"
FT                   /isolation_source="pumpkin"
FT                   /db_xref="taxon:146500"
FT   CDS             <1..1047
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /product="NIb-CP precursor"
FT                   /note="3'terminal region"
FT                   /db_xref="GOA:B0I308"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:B0I308"
FT                   /protein_id="BAG06180.1"
FT                   /translation="KFYLWLLSKDEFKELAASGKAPYIAETALRKLYTDVNTQPSELQR
FT                   YLEVLDFNHTDGCCESVSLQSGKEKETVENLDAGKDSKKDTSGKGDKPQNSQTGQGSKE
FT                   PTKAGTVSKDVNVGSKGKVVPRLQKITKKMNLPTVDGKIILSLDHLLEYKPNQVDLFNT
FT                   RATKTQFESWYSAVKAEYDLNDEQMGVIMNGFMVWCIDNGTSPDVNGVWVMMDGEEQVE
FT                   YPLKPIVENAKPTLRQIMHHFSDAAEAYIEMRNSESPYMPRYGLLRNLRDRELARYAFD
FT                   FYEVTSKTPNRAREAIAQMKAAALAGINSRLFGLDGNISTNSENTERHTARDVNQNMHT
FT                   LLGMGPPQ"
XX
SQ   Sequence 1167 BP; 403 A; 201 C; 267 G; 296 T; 0 other;
     aaattttatt tgtggcttct aagcaaagat gaatttaagg aactcgctgc atctggaaaa        60
     gctccataca tagctgagac agcattgagg aagctctaca cagacgtcaa cacacaacca       120
     agtgaattgc aaagatacct tgaagttctg gatttcaatc atactgatgg ttgctgcgaa       180
     tcagtgtctc tgcaatcagg aaaagaaaaa gaaacagtgg aaaatttgga tgcaggaaag       240
     gactcgaaga aagacaccag tggcaaaggt gacaagccgc aaaactcaca aactgggcag       300
     ggtagcaagg aaccaacaaa agctggcaca gtcagcaaag atgtgaacgt tgggtcaaaa       360
     ggaaaagtag tcccacgatt gcaaaagata acaaagaaga tgaaccttcc aacagttgat       420
     gggaaaatca tacttagcct agaccatttg cttgagtaca aacctaatca agtcgatctg       480
     tttaacactc gagcaacaaa gacacaattt gaatcatggt atagcgcggt taaagctgaa       540
     tatgatctca atgatgagca aatgggtgtg attatgaatg gttttatggt ttggtgtatc       600
     gataatggta catctccaga tgttaatgga gtttgggtga tgatggatgg agaagagcaa       660
     gttgagtacc cattaaagcc aattgtcgaa aatgcaaagc caactttaag gcaaatcatg       720
     caccattttt cagacgcagc agaggcatat attgaaatga gaaactctga aagtccgtat       780
     atgcctagat acggattact aagaaatttg agagacaggg aattagcacg ttatgctttt       840
     gacttctatg aggttacttc taaaacacca aatagggcaa gagaagcaat agcacaaatg       900
     aaggccgcag ctctcgcggg aattaacagc aggttatttg gacttgatgg taatatctcg       960
     accaattccg aaaatactga gaggcacact gcaagggacg taaatcaaaa tatgcatact      1020
     ttgttgggta tgggtccacc gcagtaaaga ctaggtaaac tggtcacagt tagcatttcg      1080
     ggtcgttata agttttctat aatataatat gtcgcacttt atttagtata gtgtgatttt      1140
     atcacctttg tactgtttat gttagcg                                          1167
//