ID AB330080; SV 1; circular; genomic DNA; STD; VRL; 2694 BP. XX AC AB330080; XX DT 06-JUL-2007 (Rel. 92, Created) DT 18-JAN-2009 (Rel. 99, Last updated, Version 3) XX DE Tomato leaf curl New Delhi virus-[cucumber:Thailand] DNA, complete genome, DE segment: B. XX KW . XX OS Tomato leaf curl New Delhi virus-[cucumber:Thailand] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2694 RA Ito T., Ikegami M.; RT ; RL Submitted (26-JUN-2007) to the INSDC. RL Contact:Masato Ikegami Tohoku university, Agriculture; 1-1 Amamiya-machi, RL Tsutsumi-dori, Aoba-ku, Sendai, Miyagi 981-8555, Japan XX RN [2] RX DOI; 10.1007/s00705-007-0029-y. RX PUBMED; 18193155. RA Ito T., Sharma P., Kittipakorn K., Ikegami M.; RT "Complete nucleotide sequence of a new isolate of tomato leaf curl New RT Delhi virus infecting cucumber, bottle gourd and muskmelon in Thailand"; RL Arch. Virol. 153(3):611-613(2008). XX DR MD5; 2418083f9f147f243559ac41586562df. DR EuropePMC; PMC3125359; 21676270. XX FH Key Location/Qualifiers FH FT source 1..2694 FT /organism="Tomato leaf curl New Delhi FT virus-[cucumber:Thailand]" FT /segment="B" FT /mol_type="genomic DNA" FT /country="Thailand" FT /isolation_source="cucumber" FT /note="synonym: Tomato leaf curl New Delhi virus - FT [Cucumber Thailand]" FT /db_xref="taxon:452661" FT CDS 368..1249 FT /codon_start=1 FT /transl_table=1 FT /gene="nuclear shuttle protein" FT /product="BV1" FT /db_xref="GOA:A6P7K7" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:A6P7K7" FT /protein_id="BAF69034.1" FT /translation="MLIYKTATYITLHGFVVATHFPSQRNGFAYPYPTPRRSGNPFNRT FT YNGIKSSRLWKSRKYQNWKRNRSIHSKSLCPTELFGDSISKQYTRKEICETQQGSEYLL FT HNNRYMTSYVSYPAKTRTGTNNRVRSYIKLKSLNLSGTIAVRNSDVMTEAPQTNGLYGV FT MSVVVVRDKSPKIYSATQPLIPFVELFGSVNACRGSLKVAERHHERFVLLKQTSVIVNT FT PNSNCIKKFCIPNCIPRTYTTWVTFKDEEEDSCSGLYSNTLRNAIILYYVWLSDVPSQV FT DLYSNVILNYIG" FT CDS complement(1306..2151) FT /codon_start=1 FT /transl_table=1 FT /gene="movement protein in DNA-B" FT /product="BC1" FT /db_xref="GOA:A6P7K8" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:A6P7K8" FT /protein_id="BAF69035.1" FT /translation="MSTGNEGMGMGVGGYIHSERVEYALTNDAAEVTLSFPSMFEQKIS FT QLRNRCMKIDHVVLEYRSQVPINAVGHVVIEIHDMRLTEGDTKQAEFTIPIKCNCNLHY FT YSSSFFSVKDKNPWRVEYRVENANIVNGVHFCKMMGKLKLSSAKHSTDVEFRPPKIEIQ FT TKEFTVNDIDFWSVGSKPQTRRLVDGSRLMGHSSRSLRVPYLTIGPNESWASRSEIGIS FT SVTSRPYKNLSGLDDSAIDPGPSASQAGSITREEIADIITKTVEQCIKSNVNAPISKGV FT " XX SQ Sequence 2694 BP; 755 A; 599 C; 525 G; 815 T; 0 other; accgaatggc cgcgaaaatt ttttgccgcc tatcctgacc gttgcttcgt aatcattgca 60 cgccattact cgtacgattt gcaacacgtg tattacacta acagacttta tgcgaataaa 120 tgtctgaaag aggtctcttt aatttatacg tggtcccgac atgctttttt cgtacatcga 180 ttatttgcgt tggtggtccc ccagcactat ataaaggttt tcacgtaaag caaattgcct 240 tctttgctat atacattttg atcggtcgag atgaaaatta atatgttgag aaaatgccgg 300 tcgtccgatc ttatgagata tgctttaatt caaacactaa ttgtttgaat tttatccaat 360 gcgtaaaatg ctaatttata aaactgctac atatatcaca ttacatggtt ttgtcgttgc 420 cacacatttc ccatcccaga gaaatggctt tgcttatccc tatcccacac ctcgccgttc 480 cggtaaccct ttcaacagaa catacaacgg aatcaagagt tcccgcttgt ggaagtctcg 540 gaagtatcaa aactggaagc gcaatcgcag tatccattcc aaatcactct gtccaaccga 600 actgtttggt gattcaatct ccaaacaata tacgcgtaag gaaatctgtg aaacacagca 660 ggggtctgag tatcttctcc acaacaatcg ttacatgaca tcatatgtct cttatcctgc 720 gaagaccaga actggaacga ataaccgcgt tcgttcctat atcaagttaa agagtttgaa 780 cttatcgggg accattgccg ttcgaaattc ggatgtcatg acggaagctc cgcaaacaaa 840 tggactgtac ggggtgatgt ctgtcgttgt agttcgcgat aaatcgccaa agatttattc 900 tgcgacgcaa cccttgatac cgtttgtgga actgtttgga tctgttaatg catgcagggg 960 aagtctgaaa gtggcagaac gccaccatga acgatttgta ctgctgaaac aaacatccgt 1020 catcgtcaat acaccaaatt cgaactgtat caagaaattc tgcattccta actgcatccc 1080 aagaacttac acaacctggg taacgttcaa agacgaagaa gaagatagct gtagtggact 1140 atattcaaac actctccgaa atgcaattat tttatattac gtgtggttaa gcgatgtacc 1200 ctcacaggtc gatctatata gcaatgtaat tcttaattac attggatgat gtattgaaat 1260 gcactagaaa cattttattc ataaataaat gttgcttaaa atttgttaca cgccctttga 1320 tattggagca tttacatttg attttataca ttgctctaca gtcttcgtaa ttatgtccgc 1380 aatttcttcc ctcgttatac tccctgcttg tgatgccgat ggacctggat cgattgccga 1440 atcgtccagt ccactcaggt ttttgtatgg tctactggtg acggacgaaa tgccgatttc 1500 cgatctgctt gcccatgact cgttcggacc tattgtcaga tatggtacgc gtaacgatct 1560 tgaactatgt cccattaacc tagaaccatc gacaagacgc cttgtctgcg gtttggaacc 1620 gactgaccag aaatcaatgt cgttaacggt gaattccttg gtctgtattt ctatctttgg 1680 tggtcggaat tcgacgtcag tcgaatgttt tgccgacgac agcttcaatt tccccatcat 1740 tttacagaag tgtactccat ttacgatgtt tgcgttctcc actcggtatt ccactctcca 1800 aggattctta tccttgacag agaagaatga agaagagtag tagtgcaggt tgcagttgca 1860 ttttatcgga attgtgaatt ccgcttgttt tgtgtctccc tctgtcaatc tcatgtcgtg 1920 tatctctatc acgacatgac caacagcatt aatgggcacc tgactgcgat attccagtac 1980 gacgtgatct attttcatgc atctattcct caactggctt atcttctgct cgaacattga 2040 aggaaacgac aacgtgacct ctgcagcatc gtttgtgagg gcatattcaa cacgttctga 2100 gtgaatatac ccacctacgc ccatgcccat cccttcattt cctgttgaca tattggtcgc 2160 gcagcgcaga acctacagaa acacagaagg acggacttcg accctagaaa ccccaattac 2220 gcagaaaccg tagcaaacaa ctaagatgtt ttgcaaagga tggaggtgca tggatttata 2280 atcttttcca tgtcatgtct atgtcatcgt aaataccctc aaacgaacgg aacatatttg 2340 tcgaagaaaa aggaattgtg gctgtgtatt atccaattga catacatcat tgatatattg 2400 gaagcccaat ttattttaat tgggctgttg ctatttatat gaaaaagccc attaaactgg 2460 cccatcatcg aagtttatct ttaaaacgac agcgcttcgt tatatgatgc tagcgaaagt 2520 tagagagaag caggagtttc tctctctaga caccatattg gcgtccctca actttctcta 2580 tgtaattggc gtctggcgtc ccatatatag gtaggacgct aaatggcagg attgtaattg 2640 tggaaagcaa attactttaa ttcaaaaccc tcatagcggc cattcgttaa tatt 2694 //