ID AB330078; SV 1; circular; genomic DNA; STD; VRL; 2736 BP. XX AC AB330078; XX DT 06-JUL-2007 (Rel. 92, Created) DT 07-AUG-2008 (Rel. 96, Last updated, Version 2) XX DE Squash leaf curl China virus - [Thailand] DNA, complete genome, segment: A. XX KW . XX OS Squash leaf curl China virus - [Thailand] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2736 RA Ito T., Ikegami M.; RT ; RL Submitted (26-JUN-2007) to the INSDC. RL Contact:Masato Ikegami Tohoku university, Agriculture; 1-1 Amamiya-machi, RL Tsutsumi-dori, Aoba-ku, Sendai, Miyagi 981-8555, Japan XX RN [2] RX DOI; 10.1111/j.1365-3059.2007.01803.x. RX AGRICOLA; IND44079165. RA Ito T., Ogawa T., Samretwanich K., Sharma P., Ikegami M.; RT "Yellow leaf curl disease of pumpkin in Thailand is associated with Squash RT leaf curl China virus"; RL Plant Pathol. 57(4):766-766(2008). XX DR MD5; fc1f975eacc4df50eb88f4a25a3f9b66. XX FH Key Location/Qualifiers FH FT source 1..2736 FT /organism="Squash leaf curl China virus - [Thailand]" FT /segment="A" FT /mol_type="genomic DNA" FT /country="Thailand" FT /db_xref="taxon:452660" FT CDS 119..457 FT /codon_start=1 FT /transl_table=1 FT /gene="V2 protein" FT /product="V2" FT /db_xref="GOA:A6P7J7" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:A6P7J7" FT /protein_id="BAF69024.1" FT /translation="MWDPLMHEFPESVHGLRCMLAVKYLQEVEKTYSPDTVGYDLVRDL FT ILVLRAKNYVEATSRYYHFNSRVEGTPTSQLRQPICFPCSCPHCPRHKGKGLDKQADEQ FT KTKDVQDV" FT CDS 279..1049 FT /codon_start=1 FT /transl_table=1 FT /gene="coat protein" FT /product="V1" FT /db_xref="GOA:A6P7J8" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:A6P7J8" FT /protein_id="BAF69025.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYASRAVVPIARVTKGKAWT FT NRPMNRKPKMYRMYRSPDVPRGCEGPCKVQSFESRHDVSHIGKLMCISDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENMKTKNHTNSVMFFLVRDRRPTGTPQDFGEVFNMFDNEP FT STATVKNMHRDRYQVLRKWHATVTGGTYASREQALVRKFVRVNNYVVYNQQEAGKYENH FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT CDS complement(1046..1456) FT /codon_start=1 FT /transl_table=1 FT /gene="replication enhancer" FT /product="C3" FT /db_xref="GOA:A6P7J9" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:A6P7J9" FT /protein_id="BAF69026.1" FT /translation="MITDSRTGEYITVDRAESGVYIWEVPNPLYFKILKHDIRPCLEEH FT DIIKVQVMFNHNLRRALRLHKCAITFQIWTGLRPPTGIFLRVFKTQVLKYLDMIGVIGI FT YNVIRAVYHVLDNVLEKTIDVWTTYDVKLNIY" FT CDS complement(1191..1595) FT /codon_start=1 FT /transl_table=1 FT /gene="transcriptional activator protein" FT /product="C2" FT /db_xref="GOA:A6P7K0" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:A6P7K0" FT /protein_id="BAF69027.1" FT /translation="MQSSSPSRNHSIPVAKESQPQKKKRHIRRRRIDLPCGCSYYMSIN FT CHDHGFTHRGVHHCGSSREWRVYLGGSKSPLFQNIKARHQTVSRRTRHNQGAGNVQPQP FT AESTAASQMCDNFPDLDGLTPADWDFLESL" FT CDS complement(1498..2583) FT /codon_start=1 FT /transl_table=1 FT /gene="replication-associated protein" FT /product="C1" FT /db_xref="GOA:A6P7K1" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:A6P7K1" FT /protein_id="BAF69028.1" FT /translation="MAPPRAFKISAKNYFLTYPKCSLTKEEALSQLKTLETPTSKKFIK FT ICRELHEDGSPHIHVLIQFEGKFQCKNNRFFDLVSPSRSAHFHPNIQGAKSASDVKKYI FT DKDGDVLEWGVFQIDGRSARGGQQTANDAYARAINTGNKEDALKVLKELAPKDYVLQFH FT NMISNLDRIFPPRAEVYVSPFSVSSFDRVPQELVDWVSGNVGCSAARPIRPIGIVLEGD FT SRTGKTAWARSLGPHNYLCGHLDLSPRVYNNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVMIKGGIPTIFLCNKGPNSSYKEYLDEEKNAALKQWALKNAIFVTIEEPL FT YSGRERIATAEEEEAHQAQTN" XX SQ Sequence 2736 BP; 729 A; 607 C; 607 G; 793 T; 0 other; accgaatggc cgcgcgattt tttatgtggg ccctcgacca atgaaattca cgctacatgg 60 cttatttatt acgtggggac cattaaatag acttccgcac caagttttga tccacaacat 120 gtgggatcca cttatgcacg aattccctga aagcgttcat ggtctaaggt gcatgctagc 180 ggtgaaatat cttcaggaag tggaaaagac atattccccg gacacagtcg gctacgatct 240 tgtccgcgat ctcattctgg ttctccgcgc aaagaactat gtcgaagcga ccagccgata 300 ttatcatttc aactcccgcg tcgaaggtac gccgacgtct caacttcgac agcccatatg 360 cttcccgtgc agttgtcccc attgcccgcg tcacaaaggg aaaggcctgg acaaacaggc 420 cgatgaacag aaaaccaaag atgtacagga tgtatagaag tcccgacgtg ccaaggggct 480 gtgaaggccc ttgtaaagtt cagtcgtttg agtctaggca cgatgtctct catattggaa 540 agctgatgtg tatcagcgat gttacacgag gaaccggact cacacatcgc gttgggaagc 600 gattttgtgt gaaatctgtt tatgttttgg gaaagatatg gatggacgaa aatatgaaga 660 ctaaaaatca cactaatagc gtcatgtttt ttctggttcg agaccgtcgt cctacaggaa 720 ctccacagga ttttggggag gtttttaata tgttcgacaa tgaaccgagc actgcaacgg 780 tgaagaacat gcatcgtgac cgataccaag tgttgcgcaa atggcatgcc actgtgacag 840 gaggaacata cgcatcaagg gagcaagcat tagttaggaa gtttgttagg gtcaataatt 900 atgttgtcta caatcaacaa gaggccggca agtatgagaa tcatactgaa aatgcattaa 960 tgttgtatat ggcctgtact cacgcatcga accctgtata tgcgactttg aaaatccgga 1020 tctattttta tgattcggta acaaattaat atatattcaa tttcacatca tatgttgtcc 1080 atacatcaat cgtcttttct aatacattgt ccaatacatg ataaactgct cttattacat 1140 tataaatacc aatcacccct atcatgtcca ggtacttaag gacctgggtt ttaaagactc 1200 tcaagaaaat cccagtcggc gggcgtaagc ccgtccagat ctggaaagtt atcgcacatt 1260 tgtgaagccg cagtgctctc cgcaggttgt ggttgaacat tacctgcacc ttgattatgt 1320 cgtgttcttc tagacacggt ctgatgtcgt gctttaatat tttgaaatag aggggatttg 1380 gaacctccca gatatacacg ccactctctg ctcgatccac agtgatgtac tcccctgtgc 1440 gtgaatccgt gatcatggca atttattgac atgtaatacg agcatccgca cggtagatca 1500 attcgtctgc gcctgatgtg cctcttcttc ttctgcggtt gcgattcttt cgcgaccgga 1560 atagagtggt tcctcgatgg tgacgaagat tgcattcttt aatgcccact gcttcagtgc 1620 tgcattcttt tcttcatcga gatattcttt gtaactgctg ttcggtcctt tattgcagag 1680 gaagatggtg ggaattccac ctttaatcat gactggcttt ccgtacttcg tgttgctttg 1740 ccagtctctc tgggccccca tgaattcttt aaaatgcttt agatagtggg gatcaacgtc 1800 atcaatgacg ttgtaccaag catcattatt gtacactctc gggcttagat ccaaatggcc 1860 gcacaagtaa ttgtgtggtc ctaaagaacg cgcccacgca gttttgcccg ttctactatc 1920 accctctaag actattccta tgggtctaat cggccgcgca gcggaacacc ccacattacc 1980 tgaaacccaa tcgacgagtt cttgcggaac tctgtcgaag gatgaaactg aaaaaggaga 2040 aacatacacc tcagcacgag gtggaaaaat acgatctaaa ttggaaatca tattatgaaa 2100 ttgcaaaacg taatctttgg gtgctaattc tttcaatact ttcaatgcat cctccttgtt 2160 ccctgtattt attgctcttg cgtacgcgtc gttagctgtt tgttgacctc cacgagcaga 2220 tcggccatcg atctggaaaa caccccattc tagaacgtct ccgtctttgt cgatgtattt 2280 cttgacgtcc gatgccgatt tagctccctg aatgttcgga tggaaatgtg ctgaccgact 2340 tggggacacc aagtcgaaga atctgttatt cttgcattgg aactttcctt cgaactggat 2400 aagaacgtgg atatgcggag acccatcttc gtgcagctct ctgcaaatct tgatgaattt 2460 cttcgatgtt ggagtttcta gggtttttaa ttgggaaagt gcctcttctt tagttagaga 2520 gcactttgga tatgtgagga aatagttctt tgcacttatt ttgaaagccc taggaggagc 2580 catcaaaacg cgcgttttga atcggggtct ctccaaaact atggtatatt ggggtatggg 2640 gtctcatata tactttggac accaaatggc aaaatggtaa ttatgcaaat aattacttta 2700 attcaaaatg aaaaaagcgg ccattcgtat aatatt 2736 //