ID AB326224; SV 1; linear; genomic RNA; STD; VRL; 7553 BP. XX AC AB326224; XX DT 19-JUN-2007 (Rel. 92, Created) DT 17-AUG-2007 (Rel. 92, Last updated, Version 3) XX DE Apple chlorotic leaf spot virus genomic RNA, complete genome, strain: B6. XX KW . XX OS Apple chlorotic leaf spot virus OC Viruses; Riboviria; Tymovirales; Betaflexiviridae; Trivirinae; Trichovirus. XX RN [1] RP 1-7553 RA Yoshikawa N., Yaegashi H.; RT ; RL Submitted (15-JUN-2007) to the INSDC. RL Nobuyuki Yoshikawa, Iwate University, Faculty of Agriculture; Ueda 3-18-8, RL Morioka, Iwate 020-8550, Japan (E-mail:yoshikawa@iwate-u.ac.jp, RL Tel:81-19-621-6150, Fax:81-19-621-6150) XX RN [2] RX DOI; 10.1099/vir.0.82984-0. RX PUBMED; 17698674. RA Yaegashi H., Isogai M., Tajima H., Sano T., Yoshikawa N.; RT "Combinations of two amino acids (Ala40 and Phe75 or Ser40 and Tyr75) in RT the coat protein of apple chlorotic leaf spot virus are crucial for RT infectivity"; RL J. Gen. Virol. 88(Pt 9):2611-2618(2007). XX DR MD5; 8c0ddfeac828f233588fbc366e912c9e. DR EuropePMC; PMC4982687; 27519059. XX FH Key Location/Qualifiers FH FT source 1..7553 FT /organism="Apple chlorotic leaf spot virus" FT /sub_species="Plant virus" FT /strain="B6" FT /mol_type="genomic RNA" FT /db_xref="taxon:12175" FT CDS 152..5800 FT /codon_start=1 FT /transl_table=1 FT /gene="POL" FT /product="RNA polymerase" FT /db_xref="GOA:A6BME9" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR005123" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR008744" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="InterPro:IPR037151" FT /db_xref="UniProtKB/TrEMBL:A6BME9" FT /protein_id="BAF64462.1" FT /translation="MAFSYRTPQEELLXRLPQSQQEAISGFQYERIQKEEEKKVENFSF FT YLPEKTREWFTKSGVYLSPFAYVNHSHPGCKTLENHLLFNVVSSYISKYSYVACLSIKS FT NKMSKMERLGSNSVKTYDILNRLVTAKDKARYGPLAKPERSPCPRKTNIFIHDEIHYWS FT RDQLETFLQVHRPKNLWATLVFPPEILAGYKSSVLPFLYQFEIHGKDLVYMPDGVRSES FT YTQPLENGFLLSSSSILTRNKTTGVELRYQVSLVYSLGSHHLFHIYPTEDLMKEEVRRF FT GPYDLFDVGSLFVKPVRVPIQDFPLSVFKKIFIYLSSLKKPDVQSAVAKLRQLPDADIS FT IESVFMVQEFASRVEKNGVGNWSCSFWECMKDWFFDKLPYREVLERIGLADDLTRRLMK FT IKPLAFDIHTTDRPLTVRMVIDQIWEERQSSCDDIPNIVFYGRKEWLEHGVMPKVKKGL FT AKLVPGREFDSGDYPKEIYSDLLSSTSIWRSHDDDLRHRHASPFVILKSSRAYSEAARF FT SSHCLSLCATHGETVAKTPFELECRDKRKELSLKCLDFHVKKMKVKNVSELDAKLNENN FT KEALRRKRRVDKMKRSRMIPVHLIKSTDDKENGKAGRGEEVTADACKDVEVKEKEEKVE FT PPTEYGKMEVAMEHVQFAPESSANLKLSDLIGKEQLCSSGLIKTVGNDYLALARQIENM FT PLAQLTKKKAAYFCLDFPMVYFHDKVSYPTFEATGEIKQVIMKARCRWGINFNSALVQV FT YNDGCRLPLHSDNEECYDDDGILTINVTGDAKFHTTCHDEVIDLKEGNEILMPAGYQKR FT NRHAVEVASEGRTSVTLRVHKRDFSFESKLRFIKGKFDCLFVSIAEIIHKKPEEVMMFI FT PHVMDRCVSNRGCSLDDAKAICEKYEIKVECEGDCGLIECGTSGLSVGRMLLRGNHFTV FT ASVRRSSMDSLANSSKELKSNGVLDHVMFNFHKRLKLVEPDLTTVDIKVDSSRAGKLLK FT SLMDGMTGIVSHNSTHEGWRMIKGINSTSEMRSFMSMIKGQSEEVKGDLFDRVQELNFM FT KVKIHGIFGFAGSGKSHAIQNLIQTEFKGSQGIMVICPRRFLAKDWSEKGVDEKDIKTF FT ESALKSDVKGKRLFILDEVSLLPKGFTDLLMLKMHMEGILKKSTIVCIGDPLQAGYFCP FT KDDNYLSREGEIKRLFKDGVNYKWYSYRVNKFVAKKLAIETMNDFIGIDEQSLIYKDMP FT SAHHFMERKKNHIEVILVASMIEKESYSNYGNVMTFGESQGLTFNCGVIVLSEEAKLCS FT DAHIMVAITRFRRGFCFALGSKGSKEDYMRSMKSGLLQRMCSGVGASKEFIMGSSSVKL FT ILSEKDILKGAGIDEMDREARLEGDVWLRSMIYLGKRYHMIEPLGQVIKLTENAIKCHI FT PVCSSQTLGPELDNIQAREFREFKGKNGWSNQFREEAGPNWKFPYKVNQAMSYEAVYPR FT HRMDDDLTFLAAIKKRLRFDNVANNYAKFKAAENKGKYLAKVFLKHVPIKCGRDQRLLD FT QCRQEFEETKLSKSAATIGAHSQRSDSDWPLDKIFLFMKSQLCTKFEKRFTEAKAGQTL FT ACFPHKILVEFSPWCRYTEKVLTANLPDNYYIHQRKNFSELEDFAKRFSNGSTCVESDY FT TAFDVSQDHTILAFEVELLKHFGWDERILQSYIRMKCTLGCRLGGFAIMRFTGEFSTFL FT FNTLANMVFTFCRYEVPDGTPICFAGDDMCALRNLREIDAHEFILSKLSLKAKVNRTKV FT PMFCGWRLCCGGLIKEPCLIYERLQVAIENGRLMDVIDSYFLEFSFAYKLGERLYSHLE FT IEQLNYHQVLTRFFIRNKHLLRGDSRHNISELEWLSDEDGDDDKGSQIENRRRGYSNCW FT GEKLQNLF" FT CDS 5718..7094 FT /codon_start=1 FT /transl_table=1 FT /gene="MP" FT /product="movement protein" FT /db_xref="GOA:A6BMF0" FT /db_xref="InterPro:IPR001815" FT /db_xref="InterPro:IPR028919" FT /db_xref="UniProtKB/TrEMBL:A6BMF0" FT /protein_id="BAF64463.1" FT /translation="MMIRGHKLRIAEGDIPIAGVKSSRIYSDISPFKRASDLMIHWNEF FT VFKVMPDDIAGDGFRLASIPVIPSSEVQAVLRKRESTNYVHWGALSISIDALFRKNAGV FT SGWCYVYDNRWETFEQAILQKFRFNLDSGSATFVTSPNFPVSLDDPGLSNSISVAVMFE FT NLNFKLESYPISVRVGNMCRIFDSLLSSVRNKVESNFLLEAANAEPLGAGAFGFEQDDQ FT VSELFNYIQTVPTQAIKSREHEIPKGLFGIMGKKKVKTFEFASGSRSMERRRPQRGRPL FT ERSTSQRVVPGFKSQDEKIEHQGLATDSDFENFLKGKGKEKAGAKSIASEGSSIDNISS FT REFQFARQGKAKEDGSSSEFATKGGRRSESVPGRRRQTPSWKDRGNSGTDTGVHLREHS FT DTRNVRADGVPGSDGGGEVNGGSESNRILQFEGSGQHDQSLQDYLFGSEHQQHDFPPGV FT " FT CDS 6778..7359 FT /codon_start=1 FT /transl_table=1 FT /gene="CP" FT /product="coat protein" FT /db_xref="GOA:A6BMF1" FT /db_xref="InterPro:IPR008879" FT /db_xref="UniProtKB/TrEMBL:A6BMF1" FT /protein_id="BAF64464.1" FT /translation="MAAVLNLQLKVDADLKAFLAAEGRPLHGKTGAILEQILESIFANI FT AIQGTSEQTEFLDLMVEVKSMEDQKVIGSYNLKEVVNMIKAFKTTSSDPNISNMTFRQV FT CEAFAPEARNGLVKLKYKGVFTNLFTTMPEVGNKYPELMFDFNKGLNMFIMNKAQQKVI FT TNMNRRLLQTEFAKSENEAKLSSVTTDLCI" XX SQ Sequence 7553 BP; 2330 A; 1321 C; 1865 G; 2034 T; 3 other; tgatactgat acagtgtacc atcacgtcgt gagtaaacag attgacgtaa cgcctcaatc 60 gtggtcaagg accagcattc taatgctatc acattaaata caattacgtt gcattccaaa 120 actttccgtt taaccacgtg aaaggttaca aatggctttc tcctacagaa cgccacagga 180 agagctcctg mgcagactac cccagtccca acaggaagca ataagcggat tccaatatga 240 acgcattcag aaagargarg agaagaaggt ggaaaacttc tccttttact taccagaaaa 300 aaccagggaa tggttcacta agtcgggtgt ttacctttca ccttttgctt acgttaatca 360 ttctcaccct ggttgcaaaa ccctggagaa ccacctttta tttaatgttg tttctagtta 420 cattagtaag tattcctatg tagcatgtct tagtattaaa tcaaataaga tgagtaagat 480 ggaacgatta ggttcgaact ctgttaagac ttatgatatt ttgaatagat tagttacggc 540 caaagacaag gctcgttatg ggcctttggc taaaccagag agatccccct gcccaaggaa 600 gaccaacatc tttatccatg atgaaatcca ttactggtcc agggatcaac ttgaaacatt 660 tcttcaggtt catagaccta aaaatctatg ggctacgctg gtttttcctc cagaaatact 720 tgctggttac aagtcatccg ttcttccgtt tctttaccag tttgagatcc atgggaaaga 780 cttggtttat atgccagatg gtgtgaggtc agaaagttac actcaacccc ttgaaaatgg 840 ttttctgttg agttccagca gcattctcac taggaataaa accactgggg ttgaattaag 900 gtaccaggtc agtctcgtgt attcattagg gtctcatcac ttgttccaca tctacccaac 960 tgaagatttg atgaaagagg aggtgagaag atttggacct tatgacctgt ttgatgtggg 1020 gtcgctattt gttaaacctg tgcgtgtacc aattcaagat ttcccattaa gtgtctttaa 1080 aaaaatcttc atctacctaa gttcattgaa gaaacctgat gttcaatcag ctgtggccaa 1140 actcaggcag ttgccagatg ctgacatctc aattgagagc gttttcatgg ttcaggaatt 1200 tgccagcaga gtagaaaaga atggtgttgg gaattggtcc tgctccttct gggaatgcat 1260 gaaggattgg ttctttgaca aattacctta cagagaagta cttgagagaa tagggttggc 1320 cgatgatctc accaggagat tgatgaaaat caaacctttg gcttttgata ttcatacgac 1380 agataggcca ttaacggtta ggatggtcat agatcagata tgggaggaaa ggcagagttc 1440 ctgtgatgac ataccaaata ttgttttcta tggaaggaag gagtggcttg aacatggagt 1500 gatgcctaaa gtaaagaagg gccttgccaa gttggtgcct gggagagagt ttgactcagg 1560 cgattacccg aaggagatct actctgatct actgtcatca acttcaattt ggagatcaca 1620 tgatgatgat ttaagacaca gacatgcaag tccttttgtg atcctcaaat caagtagggc 1680 ttattctgag gcggcgagat tcagctcaca ttgtctcagt ttgtgtgcca ctcacggtga 1740 aacagttgct aaaacccctt ttgagttaga gtgcagagac aaaagaaagg agttatcact 1800 caaatgtttg gattttcacg tcaaaaagat gaaggtgaag aatgtatctg agcttgatgc 1860 caaacttaat gaaaataata aagaagcatt gagaagaaag agaagggtcg acaaaatgaa 1920 gcgatcaagg atgattccag tacatctgat caaatcaact gatgacaaag agaatggcaa 1980 agcagggagg ggagaggaag tgactgcgga tgcctgcaaa gatgtagaag ttaaagagaa 2040 ggaggaaaaa gttgaacccc ctactgagta cggcaaaatg gaagtggcca tggagcatgt 2100 gcaatttgct ccggaatctt ctgcaaattt gaagttaagc gatttgatcg ggaaagaaca 2160 gctctgctcc tctggtttga ttaagactgt tgggaatgat taccttgcac tagccaggca 2220 gatagagaac atgcctcttg ctcagctaac gaaaaagaaa gcggcgtatt tttgtcttga 2280 ttttccaatg gtgtattttc atgacaaagt ttcttacccg acttttgaag ctactgggga 2340 aattaagcaa gtcatcatga aggcaaggtg cagatggggg atcaatttca acagcgcgct 2400 ggtgcaggtt tacaacgatg gatgtaggtt gcctcttcac agtgataatg aagaatgtta 2460 tgatgatgat ggaatactta caatcaacgt tacgggggat gcgaagtttc ataccacctg 2520 tcatgatgaa gtgatagatc tcaaggaagg taatgagata cttatgccag ctggttacca 2580 aaagaggaac aggcatgctg tggaggttgc ttcggaagga aggacgagcg tcacattgag 2640 ggtgcacaaa agagacttca gttttgaatc caagctcagg ttcatcaaag gcaagtttga 2700 ctgcttgttc gtcagcattg ctgagataat acacaagaag ccggaagagg tcatgatgtt 2760 cattccacat gttatggata ggtgtgtgag caacaggggt tgttcacttg atgatgcaaa 2820 ggcaatatgt gagaaatatg agataaaagt agaatgtgaa ggtgattgcg gcctaatcga 2880 atgtggaaca tcagggcttt ctgttggaag gatgctgctt aggggtaacc attttaccgt 2940 agcatcggtg agaaggtcat ccatggattc attggcgaat tcatcaaaag aattgaaatc 3000 aaatggagtc ttggatcatg taatgtttaa cttccataag agactcaagt tggtagaacc 3060 tgatctaaca acagttgata tcaaagttga ttcgtcaagg gcagggaaat tgctaaagag 3120 cttgatggat gggatgactg ggattgtttc tcacaactca acacatgaag gttggaggat 3180 gatcaaagga ataaatagca cttctgaaat gcgatcattc atgagcatga ttaaaggcca 3240 aagtgaagag gtcaaaggtg atttgtttga cagggtccag gagttgaatt ttatgaaagt 3300 caagattcat ggcatttttg ggtttgctgg gtcgggaaag agtcatgcga ttcaaaattt 3360 aattcagact gagttcaaag gttcacaggg tattatggtg atttgcccaa gaagatttct 3420 tgcaaaagat tggagcgaaa aaggggtaga tgaaaaggac atcaaaacct ttgaaagtgc 3480 attgaaatca gatgtcaaag gaaaaaggtt gttcatacta gatgaagtca gtctactacc 3540 aaaaggtttt actgacctct tgatgcttaa gatgcacatg gaagggattc tcaagaaatc 3600 aacaattgtg tgcattggag accctcttca agctggatac ttctgtccta aggatgacaa 3660 ttatttgtct agggaaggag aaatcaaaag acttttcaaa gatggggtta attacaaatg 3720 gtacagctac agggtcaaca agtttgttgc aaagaaactt gcaatagaaa caatgaatga 3780 cttcattggc atagacgaac aaagcttgat atataaggat atgccatctg cccatcactt 3840 catggagagg aagaagaatc acattgaggt gatcctcgtt gctagcatga tagaaaaaga 3900 gtcgtactct aattatggca acgtgatgac ttttggtgaa tcacagggtc tcacattcaa 3960 ttgcggagta atagtactct ctgaggaagc taagttgtgc tctgatgctc acataatggt 4020 cgcaatcaca agatttagaa ggggcttctg tttcgcactt gggagtaagg gttcaaaaga 4080 ggattacatg aggtcaatga agagtggact tttgcaaaga atgtgttctg gggttggtgc 4140 ttctaaagag ttcataatgg gatcctcttc agtcaaatta attttgagcg aaaaagacat 4200 tcttaaaggg gccgggattg atgaaatgga cagggaggcc aggttagaag gagatgtgtg 4260 gcttagaagt atgatatacc ttgggaagag gtaccacatg attgagccac ttggtcaggt 4320 tatcaaatta acggagaatg ccatcaaatg tcacattcct gtttgttcaa gccagacact 4380 gggtcctgag ctggataaca ttcaagctag ggaattcaga gaattcaaag ggaagaatgg 4440 gtggtcaaat caatttcggg aggaagcggg gccaaactgg aagtttcctt acaaagtcaa 4500 ccaggcgatg agctacgagg ctgtgtaccc aaggcacaga atggatgatg atctgacatt 4560 ccttgcagca ataaagaaaa ggcttcgttt tgacaatgtg gcgaacaact atgcaaaatt 4620 caaagcagca gagaacaagg gaaagtacct tgcaaaggtt ttcttgaagc atgtcccgat 4680 aaagtgtggg agggaccaga gacttttgga tcagtgcaga caagagtttg aggagacgaa 4740 gctttcaaag agcgcagcaa ccataggggc acattcacaa agatccgatt cagactggcc 4800 ccttgataag atctttctat tcatgaaatc gcaactctgc accaaatttg agaagagatt 4860 tacggaagca aaggcaggtc aaaccctggc ttgctttccg cacaagatcc tggtggaatt 4920 cagtccatgg tgcaggtata cagaaaaagt cctcacggca aatttgcctg acaactatta 4980 catccaccaa aggaagaatt tcagtgaatt ggaagatttc gcaaaaaggt tttctaatgg 5040 ttcaacatgt gtggagtctg attacacagc ctttgatgtc tcacaggatc acaccatttt 5100 ggcatttgag gttgagttac tcaaacattt tggttgggat gaaagaatat tgcagagtta 5160 catcagaatg aaatgtactt tgggatgcag gttgggcgga tttgccatta tgagattcac 5220 tggtgaattt tcaacgttct tgttcaacac tcttgcgaac atggttttca ctttctgcag 5280 gtatgaggtt ccagatggaa cccccatttg ttttgcaggt gatgacatgt gcgctctgag 5340 gaatctgaga gagattgatg cccatgagtt catcctcagc aagttgagtt tgaaggcgaa 5400 ggtgaatagg acaaaggtgc ctatgttttg tggatggaga ttgtgttgtg gcggtctcat 5460 taaagaacct tgtttgattt atgagcggct gcaagtagca atcgaaaatg ggagattgat 5520 ggacgtgata gactcgtatt ttcttgaatt ttcattcgcc tacaaattag gtgagaggct 5580 ctattcacat cttgaaattg aacagttgaa ttatcatcag gttctaacaa ggtttttcat 5640 caggaataag catcttttga gaggtgactc tagacacaac atctcagagc tagagtggtt 5700 gtctgacgag gatggcgatg atgataaggg gtcacaaatt gagaatcgca gaaggggata 5760 ttccaattgc tggggtgaaa agctccagaa tttattctga cataagccct ttcaagaggg 5820 cctctgacct tatgattcac tggaatgaat ttgtgtttaa ggtcatgccg gatgacattg 5880 ctggggatgg ttttagattg gcgtcgatac ctgtgatacc ctcttcagag gttcaagctg 5940 ttctaagaaa gagagagagc acgaactatg tgcattgggg agcattgtcg atatcaattg 6000 acgccctttt cagaaagaat gctggagtct ctggttggtg ctacgtatat gataacagat 6060 gggaaacatt tgagcaggca attctgcaaa aattccgctt caatctggac agtggttcag 6120 ctacatttgt gacttcccca aactttccgg tgtcattgga tgacccgggc ctgtcaaatt 6180 caatcagtgt ggcggtgatg ttcgaaaacc tcaacttcaa gcttgaaagt tacccaatca 6240 gcgtgagagt tggaaacatg tgcagaattt tcgacagcct tttgagtagt gtcaggaaca 6300 aagttgaatc caacttctta cttgaggctg ccaatgctga accgctgggc gcaggggcct 6360 ttggttttga gcaggatgac caggtgagtg aactgtttaa ttatattcaa actgtcccta 6420 cccaggccat caagtcaaga gagcatgaaa ttccgaaggg gttatttgga ataatgggaa 6480 aaaagaaggt caagactttt gagtttgctt cagggtcaag gagtatggaa agaaggaggc 6540 cacagagagg gagaccgctg gagaggtcca ccagccaaag agttgttcct ggatttaagt 6600 cccaggatga gaaaattgaa catcaaggct tagcaactga tagtgatttt gaaaattttc 6660 tcaaagggaa aggaaaagag aaggctggag ctaaatccat tgcttcagag gggtcatcca 6720 ttgacaacat ctcttcaaga gagtttcagt ttgctcgaca aggtaaggcg aaggaggatg 6780 gcagcagttc tgaatttgca actaaaggtg gacgcagatc tgaaagcgtt cctggccgca 6840 gaaggcagac cccttcatgg aaagacaggg gcaattctgg aacagatact ggagtccatc 6900 ttcgcgaaca tagcgataca aggaacgtca gagcagacgg agttcctgga tctgatggtg 6960 gaggtgaagt caatggagga tcagaaagta atcggatcct acaatttgaa ggaagtggtc 7020 aacatgatca aagccttcaa gactacctct tcggatccga acatcagcaa catgactttc 7080 cgccaggtgt gtgaggcttt cgcaccggag gcaaggaacg ggttggttaa actgaagtat 7140 aaaggggtct ttaccaacct ctttacgacc atgccagaag taggaaataa gtacccggag 7200 ctgatgtttg atttcaataa gggtcttaac atgttcatca tgaacaaggc ccaacaaaaa 7260 gtcataacta atatgaatcg gcgtctttta caaactgaat ttgcaaaaag cgagaatgag 7320 gcgaagctct catctgttac aactgatctt tgcatttagt ttgtttaaga agttcggttt 7380 aataaataaa ataaataaat agtgtgtcgt gtgttaaata tatttacatt aaatatgctt 7440 gcattaaata aacaaactct cgaacccatg aaagagtata aagagtcatg gtatttaatt 7500 ggagtgttta gacttataat aaatagcctg tagactttta aatattttac tac 7553 //