ID AB307731; SV 1; circular; genomic DNA; STD; VRL; 2754 BP. XX AC AB307731; XX DT 12-JUN-2007 (Rel. 92, Created) DT 18-JAN-2009 (Rel. 99, Last updated, Version 5) XX DE Tomato leaf curl Philippines virus - Laguna DNA, segment A, complete DE sequence. XX KW . XX OS Tomato leaf curl Philippines virus - Laguna OC Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; OC Geplafuvirales; Geminiviridae; Begomovirus; OC Tomato leaf curl Philippines virus. XX RN [1] RP 1-2754 RA Matsuda N., Bajet N.B., Sharma P., Ikegami M.; RT ; RL Submitted (05-JUN-2007) to the INSDC. RL Contact:Naoki Matsuda Graduate School of Agricultural Science, Tohoku RL University; 1-1, Tsutsumidori-Amamiyamachi, Aoba-ku, Sendai, Miyagi RL 981-8555, Japan XX RN [2] RX DOI; 10.1007/s00705-008-0065-2. RX PUBMED; 18357407. RA Matsuda N., Sharma P., Bajet N.B., Ikegami M.; RT "Molecular characterization of a new strain of tomato leaf curl Philippines RT virus and its associated satellite DNAbeta molecule: further evidence for RT natural recombination amongst begomoviruses"; RL Arch. Virol. 153(5):961-967(2008). XX DR MD5; 6d7f517aa7216b86b16c81f45da9c52b. XX FH Key Location/Qualifiers FH FT source 1..2754 FT /organism="Tomato leaf curl Philippines virus - Laguna" FT /segment="A" FT /mol_type="genomic DNA" FT /country="Philippines:Laguna" FT /isolation_source="tomato" FT /db_xref="taxon:499612" FT CDS 132..476 FT /codon_start=1 FT /transl_table=1 FT /gene="V2" FT /product="pre-coat protein" FT /db_xref="GOA:A6BM87" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:A6BM87" FT /protein_id="BAF63870.1" FT /translation="MWDPLVHPFPESLHGFRCMLAIKYLQSLQNKYSPDTVGHEFLKDF FT ICILRSKNYAEAFNRYSNVVANVYNTSEAQLRESVQSPCLCPHCPRHVLQAKVMDLQAH FT VSQAQDVQNV" FT CDS 292..1068 FT /codon_start=1 FT /transl_table=1 FT /gene="V1" FT /product="coat protein" FT /db_xref="GOA:A6BM88" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:A6BM88" FT /protein_id="BAF63871.1" FT /translation="MPKRSIDTVTSLPMSITRRRLNYGSQYSLPASVPTVPDMSYKRRS FT WTYRPMFRKPKMYRMYRSRDVPRGCEGPCKVQSYEQRHDIAHVGKVICVSDVTRGNGLT FT HRVGKRFCVKSVYVLGKVWMDENIKTKNHTNTVMFFLVRDRRPYGTPQDFGQVFNMYDN FT EPSTATVKNDNRDRYQVLRKFQATVTGGQYASKEQAIVKRFMKINNHVTYNHQEAAKYD FT NHTENALLLYMACTHASNPVYATLKIRIYFYDSVQN" FT CDS complement(1065..1466) FT /codon_start=1 FT /transl_table=1 FT /gene="C3" FT /product="C3 protein" FT /db_xref="GOA:A6BM89" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:A6BM89" FT /protein_id="BAF63872.1" FT /translation="MDSRTGEPITAAQAENGVYTWTITNPLYFKISQHDKMPFLKNHDI FT ITVQIQFNHNLRKALGIHQCFLICKIWTHLHPQTWRFLRVFKYQCMKYLDNLGVISINN FT VIRAIKHVLYVVIQTIDVQISHIIKFNIY" FT CDS complement(1207..1614) FT /codon_start=1 FT /transl_table=1 FT /gene="C2" FT /product="C2 protein" FT /db_xref="GOA:A6BM90" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:A6BM90" FT /protein_id="BAF63873.1" FT /translation="MQNSSPSHNHCTQVPIKVQHKIAKRRPIRRRRIDLPCGCSYYLGL FT NCASYGFSHRGTHHCSSGREWRIYLDDNKSPLFQDIPTRQDAVLEKPRHHNSTDTVQPQ FT PEESVGNSSMFSDLQNLDSFTSSDLAFLKSI" FT CDS complement(1520..2602) FT /codon_start=1 FT /transl_table=1 FT /gene="C1" FT /product="replication-associated protein" FT /db_xref="GOA:A6BM91" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:A6BM91" FT /protein_id="BAF63874.1" FT /translation="MAPPKRFKIQAKNYFLTYPQCSLTKEDALSQLQNLNTPTNKKFIK FT ICRELHEDGSPHLHVLIQFEGKYVCTNNRFFDLVYPTRSAHFHPNIQGAKSSSDVKSYI FT DKDGDTLEWGEFQVDGRSARGGQQSANDAYAQALNTGSKSEALNVIRELAPKDFVLQFH FT NLNANLDRIFAPPLEVFVSPFPSSSFNQVPKELEEWVSENVRDAAARPWRPKSIVIEGD FT SRTGKTMWARTLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEDKNSPLKDWALKNAEFITIAQPL FT YSGTHQSPTQNSQAATNTQA" FT CDS complement(2155..2445) FT /codon_start=1 FT /transl_table=1 FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:A6BM92" FT /protein_id="BAF63875.1" FT /translation="MGALISTCLSSSRANTSARITDSSIWYTQPGQHISIRTFRELNQA FT PTSSPISTRTETPSNGVSFRSMEDLPEGDNNRPMTLTPRRLTLEVSRRLLM" XX SQ Sequence 2754 BP; 744 A; 541 C; 603 G; 866 T; 0 other; accggatggc cgcgattttt tttggtggtc cctctccact aacttctgtc ggccaataga 60 aacgctccct caaagcttat ttattaattg gtcccctatt taacccttgg tggctacgtt 120 tttctttaaa aatgtgggat cctctggtac atccctttcc tgaaagctta cacggcttca 180 gatgtatgct tgccatcaaa tatcttcaga gcttacagaa taaatattct cctgatactg 240 ttgggcatga gtttttgaaa gattttatat gcatattgcg aagtaagaat tatgccgaag 300 cgttcaatag atacagtaac gtcgttgcca atgtctataa cacgtcggag gctcaattac 360 gggagtcagt acagtctccc tgcctctgtc cccactgtcc cagacatgtc ttacaagcga 420 aggtcatgga cttacaggcc catgtttcgc aagcccaaga tgtacagaat gtatagaagc 480 cgtgatgttc ctcgtgggtg tgaaggccca tgtaaggttc agtcttatga acagcgtcat 540 gatatagccc atgtgggtaa ggtcatatgt gtgtctgatg ttactcgtgg taatgggctc 600 acacatcgtg ttggaaagag gttctgtgta aagtctgtgt atgtgttggg gaaggtctgg 660 atggatgaga acatcaagac taagaatcac actaacactg tcatgttttt tttagttcgt 720 gataggagac cctatgggac tccccaggat tttggtcagg tttttaacat gtatgataat 780 gagcctagta ctgcaactgt taaaaatgat aatagagatc gatatcaagt tcttcgtaaa 840 tttcaagcta ccgtgactgg aggtcagtat gcaagcaagg agcaagcaat agtcaagagg 900 ttcatgaaga ttaacaatca tgttacttac aatcatcaag aggctgcgaa gtatgataac 960 catacagaga acgctttact gttgtatatg gcttgtactc atgctagtaa cccagtgtat 1020 gctacgttga aaatcagaat ctatttttat gattctgttc agaattaata aatattgaat 1080 tttattatat gagaaatttg tacatctatt gtttgaatta caacgtacag tacatgcttg 1140 atagccctaa ttacattgtt aatactaatt acacccaaat tatctaaata tttcatacac 1200 tgatatttaa atactcttaa gaaacgccaa gtctgaggat gtaaatgagt ccagattttg 1260 cagatcagaa aacattgatg aattcccaac gctttcctca ggttgtggtt gaactgtatc 1320 tgtactgtta tgatgtcgtg gtttttcaag aacggcatct tgtcgtgttg ggatatcttg 1380 aaataaaggg gatttgttat cgtccaggta tatacgccat tctctgcctg agctgcagtg 1440 atgggttccc ctgtgcgaga atccatacga agcacaatta agtcctaaat agtaagagca 1500 gccgcaagga agatcaattc tacgcctgcg tattggtcgc cgcttggcta ttttgtgttg 1560 gactttgatg ggtacctgag tacaatggtt gtgcgatggt gatgaattct gcattcttta 1620 gcgcccagtc tttgagtgga gaattcttat cctcatccaa gtactcttta tacgacgacg 1680 taggtcctgg attgcagagg aagattgttg ggattccacc tttaatttga attggtttcc 1740 cgtacttcgt gttgctttgc cagtctcttt gggcccccat aaactcttta aaatgcttta 1800 ggtagtgggg gtcgacgtca tcaatgacgt tgtaccaagc atcgttactg tagacctttg 1860 gactgaggtc cagatgtcca cataaataat tatgtggtcc cagagttcta gcccacatcg 1920 tcttccccgt tcgactatcg ccctctatca caatgctttt aggtctccaa ggccgcgcag 1980 cggcatccct tacattctcg gacacccatt cttcaagttc ttttggaact tgattgaaag 2040 atgaagaagg aaaaggacta acaaaaacct ctaaaggagg tgcaaaaatc ctatctaaat 2100 tggcatttaa attatgaaat tgtaaaacaa aatcttttgg tgctaattcc ctaattacat 2160 taagagcctc cgacttactt ccagtgttaa gcgcctgggc gtaagcgtca ttggccgatt 2220 gttgtccccc tctggcagat cttccatcga cctgaaactc accccattcg agggtgtctc 2280 cgtccttgtc gatataggac ttgacgtcgg agcttgattt agctccctga atgttcggat 2340 ggaaatgtgc tgacctggtt gggtatacca gatcgaagaa tctgttattc gtgcagacgt 2400 atttgccctc gaactggata agcacgtgga gatgagggct cccatcttcg tgtaattctc 2460 gacagatctt tatgaatttt ttatttgttg gtgtatttag gttttgtaat tgggaaagtg 2520 catcttcttt agtaagagag cactgtggat aagtgaggaa ataatttttg gcttgtattt 2580 taaaacgttt gggtggtgcc atttgacttg gtcaattgga gacactcaaa cttgctgaat 2640 gaattggaga ctggagtaca atatatagtg tgtctccaaa tggcattatc gtaattccca 2700 aaagaaattc aaaattcgaa tttcgaatcc taaagcggcc atccgtataa tatt 2754 //