ID AB303555; SV 1; circular; genomic DNA; STD; VRL; 3205 BP. XX AC AB303555; XX DT 30-AUG-2007 (Rel. 93, Created) DT 16-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Torque teno midi virus DNA, complete genome, isolate: MDJHem5. XX KW . XX OS Torque teno midi virus OC Viruses; Anelloviridae; unclassified Anelloviridae. XX RN [1] RP 1-3205 RA Okamoto H.; RT ; RL Submitted (11-MAY-2007) to the INSDC. RL Contact:Hiroaki Okamoto Jichi Medical University School of Medicine, RL Division of Virology, Department of Infection and Immunity; 3311-1 RL Yakushiji, Shimotsuke-Shi, Tochigi-Ken 329-0498, Japan XX RN [2] RX DOI; 10.1007/s00705-007-1046-6. RX PUBMED; 17712598. RA Ninomiya M., Takahashi M., Shimosegawa T., Okamoto H.; RT "Analysis of the entire genomes of fifteen torque teno midi virus variants RT classifiable into a third group of genus Anellovirus"; RL Arch. Virol. 152(11):1961-1975(2007). XX DR MD5; 63923e20c151348401dff99c777fe121. XX FH Key Location/Qualifiers FH FT source 1..3205 FT /organism="Torque teno midi virus" FT /host="Homo sapiens" FT /isolate="MDJHem5" FT /mol_type="genomic DNA" FT /country="Japan" FT /isolation_source="human serum" FT /db_xref="taxon:432261" FT CDS join(220..566,2164..2575) FT /codon_start=1 FT /transl_table=1 FT /product="hypothetical protein" FT /note="ORF4" FT /db_xref="InterPro:IPR004118" FT /db_xref="UniProtKB/TrEMBL:A7VLW5" FT /protein_id="BAF76086.1" FT /translation="MSKFYKPSYYNQETKEQLWTTNIQDFHDSFCSCTTAYAHLLDIIF FT PEGHKDRNHSIFYIIKRDQQCLSGGDAEENIGGAADLPGPSTEGIKEEEKDPFADANLE FT ELIAAATDAEKRNKPKKRKESGHLFTPPRRKEQKNQDMSPATLQRKYLPRRGDTRKPTQ FT PHQAAARAAKTAQAQPPNFDNRHERETASTTTSDRHFRVKPFVTQFEIETERELSKIFK FT RPPRTYQNDPPFYPWLPPEPRVNFNLNFKF" FT CDS join(220..566,1935..2358) FT /codon_start=1 FT /transl_table=1 FT /product="hypothetical protein" FT /note="ORF3" FT /db_xref="InterPro:IPR004118" FT /db_xref="InterPro:IPR008474" FT /db_xref="UniProtKB/TrEMBL:A7VLW6" FT /protein_id="BAF76087.1" FT /translation="MSKFYKPSYYNQETKEQLWTTNIQDFHDSFCSCTTAYAHLLDIIF FT PEGHKDRNHSIFYIIKRDQQCLSGGDAEENIGGAADLPGPSTEGIKEEEKDPFADANLE FT ELIAAATDAEKSGEAPTLQTTLLKTQKPSQHMMFPITCNKLYKLGTQPNKSQKQFSMTG FT TIDEDSLHQQLLAECNKTSNLIHLSQLIQKQTKKKEREWTPLYTTPKKRAKKSRHVSSN FT SAKKVPSKKRRHQKTYSTSSSSSTSSKDSSSTTS" FT CDS 220..570 FT /codon_start=1 FT /transl_table=1 FT /product="hypothetical protein" FT /note="ORF2" FT /db_xref="InterPro:IPR004118" FT /db_xref="UniProtKB/TrEMBL:A7VLW7" FT /protein_id="BAF76088.1" FT /translation="MSKFYKPSYYNQETKEQLWTTNIQDFHDSFCSCTTAYAHLLDIIF FT PEGHKDRNHSIFYIIKRDQQCLSGGDAEENIGGAADLPGPSTEGIKEEEKDPFADANLE FT ELIAAATDAEKR" FT CDS 414..2423 FT /codon_start=1 FT /transl_table=1 FT /product="hypothetical protein" FT /note="ORF1" FT /db_xref="GOA:A7VLW8" FT /db_xref="InterPro:IPR004219" FT /db_xref="UniProtKB/TrEMBL:A7VLW8" FT /protein_id="BAF76089.1" FT /translation="MPFWWGRRRKYWWGRRFTRPKYRRYQRRRKRPIRRRKPRRTYRRR FT YRRRKKVRRKRKTLLVRQWNPDSILTCKIKGFLDILMGADGNQYQCYTQNRYSMPPPKH FT PCGGGFSVDRFTLQWLYDQWRLRQNIWTKPNTYKDLCRFIVAKITLYRHKTTDFIVQYS FT RQPPFLIDKWTYMQYHPYMLLQSKHTKIIPSEQTNPKGRLKKKLIIRPPKQMLSKWFFQ FT RQFATADLFQLVTAACSLNYPRLGCCNENRTLTLYYINPYFYQYSDWGQVKEHANYYKP FT YNSIADLEFWSGNTKNPTKYKPKDEIEKATDPPSTAKYYASINYNTGYFSTKVLNAFKV FT MVNSKESKPLPLGVARYNPVEDDGKGNEIWVASIHSNAYAKPAEDNLNFNGYPLWLAFW FT GYWSYLQKIKDKSFFALHYFVVKSPYIYTAQTESTKNFFPIIDWAFIQGKDPYDGYLTS FT TDKSLWYPTALRQIVTINNICKLGPYVPKYENDRLSTWELPIKYNFTFKWGGPHIADHI FT VENPKTQPTYDVPDHLQQTVQIGDPTKQKPETIFHDWDYRRGFLTSTAISRMQQNLESD FT SSLSTDSETNQKKGKRVDTSLHHPEEKSKKIKTCLQQLCKESTFQEEETPENLLNLIKQ FT QHEQQRQLKHNLLTLITDMREKQHLLQLQTGIFE" XX SQ Sequence 3205 BP; 1137 A; 777 C; 585 G; 706 T; 0 other; aggtggagtt accaaaccta tataagtaac tacactgacg aatggctgag tttaccccgc 60 tagacggtgc agggaccgga tcgagcgcag cgaggaggtc cccggctgcc caagggcggg 120 agcccgaggt gagtgaaacc accgaggtct aggggcaatt cgggctaggg cagtctagcg 180 gaacgggcaa gaaacttaaa tatacctctt ttttaataga tgtccaagtt ttacaaacca 240 agctactaca atcaagaaac taaagaacaa ctgtggacta caaacattca agactttcat 300 gattcttttt gttcgtgcac aacagcttat gcacacctat tggatataat atttccagaa 360 ggacacaaag acaggaatca ttctattttt tacattatta aaagagatca acaatgcctt 420 tctggtgggg acgcagaaga aaatattggt ggggccgcag atttaccagg cccaagtaca 480 gaaggtatca aagaagaaga aaaagaccca ttcgcagacg caaacctaga agaacttatc 540 gccgccgcta cagacgcaga aaaaaggtaa gaagaaaaag aaaaacttta cttgttagac 600 aatggaaccc agactctata cttacctgta aaattaaagg attcttagat attttaatgg 660 gggctgatgg aaaccaatat caatgctata cacaaaacag atactccatg cctccaccaa 720 aacacccttg tggaggaggt ttttcagtag atagatttac tttacaatgg ttatatgatc 780 aatggagact tagacaaaat atatggacca agccaaacac atacaaagac ctttgcagat 840 tcatagtagc taagattacc ttatacagac ataaaacaac agattttata gtacaataca 900 gcagacagcc accttttctt atagataaat ggacatacat gcagtatcac ccatacatgt 960 tactacaaag caaacatact aaaattatac caagtgaaca aactaacccc aagggcagac 1020 ttaaaaaaaa attaattatt agaccaccaa agcaaatgct ttctaagtgg ttttttcaaa 1080 gacaatttgc cacagcagat ttatttcaat tggtaactgc agcctgtagc ttaaactatc 1140 caagactagg ctgctgtaat gaaaacagaa ctttaacctt atactatatt aatccttact 1200 tttaccaata ttcagactgg ggacaagtaa aagaacacgc aaactattac aagccataca 1260 acagtatagc tgacctagaa ttctggtcag gaaacacaaa aaaccccact aaatacaaac 1320 ccaaagatga gatagaaaaa gcaacagatc ctccatcaac tgcaaaatac tatgcatcca 1380 ttaactacaa cactggctac ttttcaacta aagttttaaa tgcatttaaa gttatggtaa 1440 attccaaaga atctaaacca cttccactag gagtagctcg atacaaccca gtagaagatg 1500 atggtaaagg aaatgaaatt tgggtagcct ctatacatag caatgcctat gctaaaccag 1560 ctgaagataa ccttaatttt aatggttatc ccctatggct agcattttgg ggatactgga 1620 gctacctcca aaaaattaaa gacaaatcct tttttgcttt acattacttt gtagttaaaa 1680 gcccctatat atacactgcc caaacagaga gcaccaaaaa cttctttcca attattgact 1740 gggcttttat acaaggcaaa gatccatatg atggctacct aaccagcaca gataaatcct 1800 tatggtaccc tacagcacta agacaaatag ttaccattaa taatatatgc aaactaggac 1860 catatgtacc taaatatgaa aatgatagac taagcacatg ggaactacct attaaataca 1920 attttacttt taagtgggga ggcccccaca ttgcagacca cattgttgaa aacccaaaaa 1980 cccagccaac atatgatgtt cccgatcacc tgcaacaaac tgtacaaatt ggggacccaa 2040 ccaaacaaaa gccagaaaca attttccatg actgggacta tagacgagga ttccttacat 2100 caacagctat tagcagaatg caacaaaacc tcgaatctga ttcatctctc tcaactgatt 2160 cagaaacaaa ccaaaaaaaa ggaaagagag tggacacctc tttacaccac cccgaagaaa 2220 agagcaaaaa aatcaagaca tgtctccagc aactctgcaa agaaagtacc ttccaagaag 2280 aggagacacc agaaaaccta ctcaacctca tcaagcagca gcacgagcag caaagacagc 2340 tcaagcacaa cctcctaact ttgataacag acatgagaga gaaacagcat ctactacaac 2400 ttcagacagg cattttcgag taaaaccatt tgtaacacaa tttgaaatag aaacagaacg 2460 tgaactaagc aaaatattta aaagaccacc cagaacttac caaaatgacc ctccctttta 2520 cccctggtta ccacccgaac cccgagtaaa ctttaacctt aattttaaat tctaggccaa 2580 caatgtacac ttagtaaagc atgtttaata aagtttgcac cccaaaaaaa ttgtaaaacc 2640 aaaaaaagaa aaaaaaataa aaaattgcaa aaattcggcg ctcgcgcgcg ctgcgcgcgc 2700 gcgagcgccg tcacgcgccg gcgctcgcgc gccgcgcgta tgtgctaaca caccacgcac 2760 ctagattggg gtgcgcgcgt agcgcgcgca ccccaatgcg ccccgccctc gttccgaccc 2820 gcttgcgcgg gtcggaccac ttcgggctcg ggggggcgcg cctgcggcgc ttatttacta 2880 aacagactcc gagtcgccat ttggcccccc ctaagctccg cccccctcat gaatattcat 2940 aaaggaaacc acaaaattag aattgccgac cacaaactgc catatgctaa ttagttcccc 3000 ttttacacag taaaaagggg aagtgggggg gcaaagcccc cccacacccc ccgcgggggg 3060 ggcagagccc cccccgcacc ccccctacgt cacaggccac gcccccgccg ccatcttggg 3120 tgcggcaggg cggaggctaa aatggcggga gccaatgaat tcatactttc actttccaat 3180 taaaacccgc cacgtcacaa caaag 3205 //