ID AB290918; SV 1; circular; genomic DNA; STD; VRL; 3242 BP. XX AC AB290918; XX DT 24-MAR-2007 (Rel. 91, Created) DT 02-NOV-2009 (Rel. 102, Last updated, Version 5) XX DE Torque teno midi virus 1 DNA, complete genome, isolate: MD1-073. XX KW . XX OS Torque teno midi virus 1 OC Viruses; Anelloviridae; Gammatorquevirus. XX RN [1] RP 1-3242 RA Okamoto H.; RT ; RL Submitted (20-JAN-2007) to the INSDC. RL Contact:Hiroaki Okamoto Jichi Medical University School of Medicine, RL Division of Virology, Department of Infection and Immunity; 3311-1 RL Yakushiji, Shimotsuke-Shi, Tochigi-Ken 329-0498, Japan XX RN [2] RX DOI; 10.1099/vir.0.82895-0. RX PUBMED; 17554026. RA Ninomiya M., Nishizawa T., Takahashi M., Lorenzo F.R., Shimosegawa T., RA Okamoto H.; RT "Identification and genomic characterization of a novel human torque teno RT virus of 3.2 kb"; RL J. Gen. Virol. 88(Pt 7):1939-1944(2007). XX DR MD5; a4a7640c1965e692c15089e9c02ed9e1. XX FH Key Location/Qualifiers FH FT source 1..3242 FT /organism="Torque teno midi virus 1" FT /host="Homo sapiens" FT /isolate="MD1-073" FT /mol_type="genomic DNA" FT /country="Japan" FT /isolation_source="human serum" FT /note="originally submitted as 'Torque teno midi virus'" FT /db_xref="taxon:687379" FT CDS join(217..584,2197..2614) FT /codon_start=1 FT /transl_table=1 FT /product="hypothetical protein" FT /note="ORF4" FT /db_xref="InterPro:IPR004118" FT /db_xref="InterPro:IPR008474" FT /db_xref="UniProtKB/Swiss-Prot:A4GZ95" FT /protein_id="BAF49424.1" FT /translation="MQNLSAKDFYKPCRYNCETKNQMWMSGIADSHDSWCDCDTPFAHL FT LASIFPPGHTDRTRTIQEILTRDFRKTCLSGGADATNSGMAETIEEKREDFQKEEKEDF FT TEEQNIEDLLAAVADAEGRTSTQEKKTTTSPPRPTKENGKDQPMSPLSLRRKYMPGAGN FT GGKHPQAHPAAAAAAAETQAQPLSTNQGLKSETKIITTTNGGTRITLTRFKPGFEQETE FT KELAQAFNRPPRLFKEDKPFYPWLPRFTPLVNFHLNFKG" FT CDS join(217..584,1977..2388) FT /codon_start=1 FT /transl_table=1 FT /product="hypothetical protein" FT /note="ORF3" FT /db_xref="InterPro:IPR004118" FT /db_xref="InterPro:IPR008474" FT /db_xref="UniProtKB/Swiss-Prot:A4GZ95" FT /protein_id="BAF49425.1" FT /translation="MQNLSAKDFYKPCRYNCETKNQMWMSGIADSHDSWCDCDTPFAHL FT LASIFPPGHTDRTRTIQEILTRDFRKTCLSGGADATNSGMAETIEEKREDFQKEEKEDF FT TEEQNIEDLLAAVADAEGRYQTNQLKTQETKTNMMCPIQSKKHYKLLTQQKTLLPRCSM FT TGTTDGVALHQQLLKECNKTSQLIHLSNLIQTQNQHPRKKDYYQSSTTHKRKRKRSTNV FT SSLSAKKVHARSRKRRKTSSSSSSSSSSSSRNSSTTS" FT CDS 217..588 FT /codon_start=1 FT /transl_table=1 FT /product="hypothetical protein" FT /note="ORF2" FT /db_xref="InterPro:IPR004118" FT /db_xref="InterPro:IPR008474" FT /db_xref="UniProtKB/Swiss-Prot:A4GZ95" FT /protein_id="BAF49426.1" FT /translation="MQNLSAKDFYKPCRYNCETKNQMWMSGIADSHDSWCDCDTPFAHL FT LASIFPPGHTDRTRTIQEILTRDFRKTCLSGGADATNSGMAETIEEKREDFQKEEKEDF FT TEEQNIEDLLAAVADAEGR" FT CDS 432..2453 FT /codon_start=1 FT /transl_table=1 FT /product="hypothetical protein" FT /note="ORF1" FT /db_xref="GOA:A4GZ97" FT /db_xref="InterPro:IPR004219" FT /db_xref="UniProtKB/Swiss-Prot:A4GZ97" FT /protein_id="BAF49427.1" FT /translation="MPFWWGRRNKFWYGRNYRRKKRRFPKRRKRRFYRRTKYRRPARRR FT RRRRRKVRRKKKTLIVRQWQPDSIVLCKIKGYDSIIWGAEGTQFQCSTHEMYEYTRQKY FT PGGGGFGVQLYSLEYLYDQWKLRNNIWTKTNQLKDLCRYLKCVMTFYRHQHIDFVIVYE FT RQPPFEIDKLTYMKYHPYMLLQRKHKIILPSQTTNPRGKLKKKKTIKPPKQMLSKWFFQ FT QQFAKYDLLLIAAAACSLRYPRIGCCNENRMITLYCLNTKFYQDTEWGTTKQAPHYFKP FT YATINKSMIFVSNYGGKKTEYNIGQWIETDIPGEGNLARYYRSISKEGGYFSPKILQAY FT QTKVKSVDYKPLPIVLGRYNPAIDDGKGNKIYLQTIMNGHWGLPQKTPDYIIEEVPLWL FT GFWGYYNYLKQTRTEAIFPLHMFVVQSKYIQTQQTETPNNFWAFIDNSFIQGKNPWDSV FT ITYSEQKLWFPTVAWQLKTINAICESGPYVPKLDNQTYSTWELATHYSFHFKWGGPQIS FT DQPVEDPGNKNKYDVPDTIKEALQIVNPAKNIAATMFHDWDYRRGCITSTAIKRMQQNL FT PTDSSLESDSDSEPAPKKKRLLPVLHDPQKKTEKINQCLLSLCEESTCQEQETEENILK FT LIQQQQQQQQKLKHNLLVLIKDLKVKQRLLQLQTGVLE" XX SQ Sequence 3242 BP; 1148 A; 745 C; 631 G; 718 T; 0 other; aggtggagac tcttaagcta tataaccaag tggggtggcg aatggctgag tttaccccgc 60 tagacggtgc agggaccgga tcgagcgcag cgaggaggtc cccggctgcc cgtgggcggg 120 agcccgaggt gagtgaaacc accgaggtct aggggcaatt cgggctaggg cagtctagcg 180 gaacgggcaa gaaacttaaa aatatttctt ttacagatgc aaaacctatc agccaaagac 240 ttctacaaac catgcagata caactgtgaa actaaaaacc aaatgtggat gtctggcatt 300 gctgactccc atgacagttg gtgtgactgt gatactcctt ttgctcacct cctggctagt 360 atttttcctc ctggtcacac agatcgcaca cgaaccatcc aagaaatact taccagagat 420 tttaggaaaa catgcctttc tggtggggcc gacgcaacaa attctggtat ggccgaaact 480 atagaagaaa aaagagaaga tttccaaaaa gaagaaaaag aagattttac agaagaacaa 540 aatatagaag acctgctcgc cgccgtcgca gacgcagaag gaaggtaaga agaaaaaaaa 600 aaactcttat agtaagacaa tggcagccag actctattgt actctgtaaa attaaagggt 660 atgactctat aatatgggga gctgaaggca cacagtttca atgttctaca catgaaatgt 720 atgaatatac aagacaaaag taccctgggg gaggaggatt tggtgtacaa ctttacagct 780 tagagtattt gtatgaccaa tggaaactta gaaataatat atggactaaa acaaatcaac 840 tcaaagattt gtgtagatac ttaaaatgtg ttatgacctt ttacagacac caacacatag 900 attttgtaat tgtatatgaa agacaacccc catttgaaat agataaacta acatacatga 960 aatatcatcc atatatgtta ttacaaagaa agcataaaat aattttacct agtcaaacaa 1020 ctaatcctag aggtaaatta aaaaaaaaga aaactattaa acctcccaaa caaatgctca 1080 gcaaatggtt ttttcaacaa caatttgcta aatatgatct actacttatt gctgcagcag 1140 catgtagttt aagataccct agaataggct gctgcaatga aaatagaatg ataaccttat 1200 actgtttaaa tactaaattt tatcaagata cagaatgggg aactacaaaa caggcccccc 1260 actactttaa accatatgca acaattaata aatccatgat atttgtctct aactatggag 1320 gtaaaaaaac agaatataac ataggccaat ggatagaaac agatatacct ggagaaggta 1380 atctagcaag atactacaga tcaataagta aagaaggagg ttacttttca cctaaaatac 1440 tgcaagcata tcaaacaaaa gtaaagtctg tagactacaa acctttacca attgttttag 1500 gtagatataa cccagcaata gatgatggaa aaggcaacaa aatttactta caaactataa 1560 tgaatggcca ttggggccta cctcaaaaaa caccagatta tataatagaa gaggtccctc 1620 tttggctagg cttctgggga tactataact acttaaaaca aacaagaact gaagctatat 1680 ttccactaca catgtttgta gtgcaaagca aatacattca aacacaacaa acagaaacac 1740 ctaacaattt ttgggcattt atagacaaca gctttataca gggcaaaaac ccatgggact 1800 cagttattac ttactcagaa caaaagctat ggtttcctac agttgcatgg caactaaaaa 1860 ccataaatgc tatttgtgaa agtggaccat atgtacctaa actagacaat caaacatata 1920 gtacctggga actagcaact cattactcat ttcactttaa atggggtggt ccacagatat 1980 cagaccaacc agttgaagac ccaggaaaca aaaacaaata tgatgtgccc gatacaatca 2040 aagaagcatt acaaattgtt aacccagcaa aaaacattgc tgccacgatg ttccatgact 2100 gggactacag acggggttgc attacatcaa cagctattaa aagaatgcaa caaaacctcc 2160 caactgattc atctctcgaa tctgattcag actcagaacc agcacccaag aaaaaaagac 2220 tactaccagt cctccacgac ccacaaaaga aaacggaaaa gatcaaccaa tgtctcctct 2280 ctctctgcga agaaagtaca tgccaggagc aggaaacgga ggaaaacatc ctcaagctca 2340 tccagcagca gcagcagcag cagcagaaac tcaagcacaa cctcttagta ctaatcaagg 2400 acttaaaagt gaaacaaaga ttattacaac tacaaacggg ggtactagaa taacccttac 2460 cagatttaaa ccaggatttg agcaagaaac tgaaaaagag ttagcacaag catttaacag 2520 accccctaga ctgttcaaag aagataaacc cttttacccc tggctaccca gatttacacc 2580 ccttgtaaac tttcacctta attttaaagg ctaggcctac actgctcact tagtggtgta 2640 tgtttattaa agtttgcacc ccagaaaaat tgtaaaataa aaaaaaaaaa aaaaaataaa 2700 aaattgcaaa aattcggcgc tcgcgcgcgc tgcgcgcgcg agcgccgtca cgcgccggcg 2760 ctcgcgcgcc gcgcgtatgt gctaacacac cacgcaccta gattggggtg cgcgcgtagc 2820 gcgcgcaccc caatgcgccc cgccctcgtt ccgacccgct tgcgcgggtc ggaccacttc 2880 gggctcgggg gggcgcgcct gcggcgctta tttactaaac agactccgag tcgccattgg 2940 gcccccccta agctccgccc ccctcatgaa tattcataaa ggaaaccaca aaattagaat 3000 tgccgaccac aaactgccat atgctaatta gttccccttt tacacagtaa aaaggggaag 3060 tgggggggca gagccccccc acaccccccg cggggggggc agagcccccc ccgcaccccc 3120 cctacgtcac aggccacgcc cccgccgcca tcttgggtgc ggcagggcgg ggactaaaat 3180 ggcgggaccc aatcatttta tactttcact ttccaattaa aacccgccac gtcacacaaa 3240 ag 3242 //