ID   AB287442; SV 1; circular; genomic DNA; STD; VRL; 1346 BP.
XX
AC   AB287442;
XX
DT   13-JUN-2007 (Rel. 92, Created)
DT   14-DEC-2008 (Rel. 98, Last updated, Version 3)
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DE   Honeysuckle yellow vein mosaic disease associated satellite DNA
DE   beta-[Ibaraki] DNA, complete genome.
XX
KW   .
XX
OS   Honeysuckle yellow vein mosaic disease associated satellite DNA
OS   beta-[Ibaraki]
OC   Viruses; Tolecusatellitidae; Betasatellite; unclassified Betasatellite.
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RN   [1]
RP   1-1346
RA   Ogawa T., Ikegami M.;
RT   ;
RL   Submitted (15-DEC-2006) to the INSDC.
RL   Contact:Masato Ikegami Tohoku University, Graduate School of Agricultural
RL   Science; 1-1 Tutumidori-Amamiyamachi, Aoba-ku Sendai, Miyagi 981-8555,
RL   Japan
XX
RN   [2]
RX   DOI; 10.1016/j.virusres.2008.07.021.
RX   PUBMED; 18722488.
RA   Ogawa T., Sharma P., Ikegami M.;
RT   "The begomoviruses Honeysuckle yellow vein mosaic virus and Tobacco leaf
RT   curl Japan virus with DNAbeta satellites cause yellow dwarf disease of
RT   tomato";
RL   Virus Res. 137(2):235-244(2008).
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DR   MD5; 208d0c263265f43dfa0f5f7d8ce59d61.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1346
FT                   /organism="Honeysuckle yellow vein mosaic disease
FT                   associated satellite DNA beta-[Ibaraki]"
FT                   /host="Lonicera japonica"
FT                   /lab_host="Nicotiana benthamiana"
FT                   /isolate="Ibaraki"
FT                   /mol_type="genomic DNA"
FT                   /country="Japan:Ibaraki"
FT                   /isolation_source="honeysuckle with yellow vein symptoms"
FT                   /collected_by="Masato Ikegami"
FT                   /collection_date="2001"
FT                   /clone="pBSHGVIB-5"
FT                   /tissue_type="leaf"
FT                   /db_xref="taxon:417193"
FT   CDS             complement(202..552)
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="betaC1"
FT                   /product="putative betaC1 protein"
FT                   /db_xref="InterPro:IPR018583"
FT                   /db_xref="UniProtKB/TrEMBL:A5LHI2"
FT                   /protein_id="BAF64265.1"
FT                   /translation="MTITYDNGKGIKFIVDVRLHQIIRVLVKVYSTNQPVLTGFKCDIP
FT                   YTYAHMVLPFDFNGTEELIRDTLELMYDGSEFSNFKQEEMIDSIDMVMMHSLTHMGVDT
FT                   VDRYDVRSSYTI"
XX
SQ   Sequence 1346 BP; 444 A; 256 C; 252 G; 394 T; 0 other;
     accggtggcg agttgggtat cgcgggggaa aggtgggccc cacctttcta tataagtctt        60
     gtttattgca attgagtccc tggactctgc cttattcatt tttacacccc gaaaatgaat       120
     ttaattaata aaaataaaat taatcattaa ttttatttat acggagattt gcaatacatt       180
     gcttatcgta gtacatatta tttatatggt gtagctggac ctgacatcat atcgatctac       240
     tgtatctacc cccatatgag ttaacgagtg catcatcacc atatctattg aatcaatcat       300
     ctcttcttgt ttgaaattgg agaactctga tccatcatac atcaattcta gtgtgtccct       360
     gatgagctct tctgtcccgt tgaagtcgaa tggtagaacc atatgggcgt atgtgtatgg       420
     tatgtcgcat ttgaaaccag ttaagaccgg ttgatttgtt gaatagacct tcactaatac       480
     tcggatgatc tggtggagcc ttacgtctac gatgaacttg atcccctttc cgttgtcata       540
     tgtgatcgtc atctttacgt tgatgaaact atgctcttct atttatgtcc ttttatatag       600
     tggtggtttg tgggttgtgt gtctcaattt agtccatgta tttgtggtta tttattcagg       660
     tagtgttgtt tcctattaat taacctataa taccgtatat atgaaatata atcagaaaga       720
     aaaaaagaaa aatggaatca aagagaaaag aaaaaaaaac aatgaaaaac ctaacacaaa       780
     aaaagaaact aagaaaataa tatttattcc tatctaaagg gagcgcagct caagtataaa       840
     aaataaaagg gaaaaaagaa aatccaaaat ggagagagga aataaaaaaa aagaaatgct       900
     tcatcgattt cataatcgat gaagttaaaa aaagaaaaaa agataagaaa atactaaatc       960
     aaatgaagcc cagttgattt agcccatcta aaaaagaagc ccatctaaaa aagaagccca      1020
     tgacccacta ctataattgt tgacttggtc aacatgctat agtgtgttcc tttaccccaa      1080
     taccccgata caccaatata ttggggtaca agggttacta tatttcagtt ggactaaaat      1140
     acccctgaaa taacacatac aggcgcgtgg gagtgctctg ttaaagtaac tttctctctc      1200
     ctcaaacctc tcggagacga cgatcggagg ccttccggcc atcattttcc gacacgcgcg      1260
     gcagtgcgaa cacggatgtg ggcaaaccac tacgctacgc agcagcctta gctacgccgg      1320
     agtctagctc gccaccgttt aatatt                                           1346
//