ID AB277784; SV 1; linear; genomic RNA; STD; VRL; 2876 BP. XX AC AB277784; XX DT 13-OCT-2006 (Rel. 89, Created) DT 13-OCT-2006 (Rel. 89, Last updated, Version 1) XX DE Rupestris stem pitting-associated virus genes for RNA-dependent RNA DE polymerase, 24.4 kDa hypothetical protein, 12.8 kDa hypothetical protein, DE 8.4 kDa hypothetical protein, coat protein, partial and complete cds, DE strain: OE8. XX KW . XX OS Grapevine rupestris stem pitting-associated virus OC Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; OC Tymovirales; Betaflexiviridae; Quinvirinae; Foveavirus. XX RN [1] RP 1-2876 RA Nakaune R.; RT ; RL Submitted (11-OCT-2006) to the INSDC. RL Ryoji Nakaune, National Institute of Fruit Tree Science, Grape and RL Persimmon Research Station; Akitsu 301-2, Higashihiroshima, Hiroshima RL 729-2494, Japan (E-mail:une@affrc.go.jp, Tel:81846454756, Fax:81846455370) XX RN [2] RA Nakaune R., Nakano M.; RT "Rupestris stem pitting-associated virus related to rugose wood disease in RT Japanese grapevines"; RL Unpublished. XX DR MD5; 7d15e08c4cd13300e61e8ae119f14e6c. XX FH Key Location/Qualifiers FH FT source 1..2876 FT /organism="Grapevine rupestris stem pitting-associated FT virus" FT /strain="OE8" FT /mol_type="genomic RNA" FT /country="Japan:Okayama" FT /isolation_source="Vitis labruscana cv. Pione" FT /db_xref="taxon:196400" FT CDS <1..802 FT /codon_start=2 FT /transl_table=1 FT /product="RNA-dependent RNA polymerase" FT /db_xref="GOA:Q05JE7" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:Q05JE7" FT /protein_id="BAF34854.1" FT /translation="QHAVLVRFAPYMRYIEKKLMQALKPNFYIHSGKGLDELNEWVRAR FT GFTGICTESDYEAFDASQDHFILAFELQIMKFLGLPEDLILDYEFIKIHLGSKLGSFSI FT MRFTGEASTFLFNTMANMLFTFLRYELTGSESIAFAGDDMCANRRLRLKTEHEGFLNMI FT CLKAKVQFVSNPTFCGWCLFKEGIFKKPQLIWERICIAREMGNLENCIDNYAIEVSYAY FT RLGELSIEMMTEEEVEAHYNCVRFLVRNKHKMRCSISGLFEVVD" FT CDS 833..1498 FT /codon_start=1 FT /transl_table=1 FT /product="24.4 kDa hypothetical protein" FT /db_xref="GOA:Q05JE6" FT /db_xref="InterPro:IPR027351" FT /db_xref="UniProtKB/TrEMBL:Q05JE6" FT /protein_id="BAF34855.1" FT /translation="MNNLVKALSAFEFIGVFSVLKFPVVIHSVPGSGKSSLIRELISED FT ESFVAFTAGVPDSPNLTGRYIKPYSPGCAVQGKVNILDEYLSVQDISGFDVLFSDPYQN FT ISIPKEAHFIKSKTCRFGVNTCKYLSSFGFKVSSDGLDDVIVGSPFTLDVEGVLICFGK FT EAVDLAVAHNSEFKLPCEVRGSTFNVVTLLKSRDPTPEDRHWFYIAATRHRKKLVIMQ" FT CDS 1500..1853 FT /codon_start=1 FT /transl_table=1 FT /product="12.8 kDa hypothetical protein" FT /db_xref="GOA:Q05JE5" FT /db_xref="InterPro:IPR001896" FT /db_xref="UniProtKB/TrEMBL:Q05JE5" FT /protein_id="BAF34856.1" FT /translation="MPFQQPANWAKTITPLTIGLGIGLVLHFLRKSNLPYSGDNIHQFP FT HGGRYRDGTKSITYCGPKQSFPSSGVFGQSENFVPLMLVVGLIAFIHVLSVWNSGLGRN FT CNCHPNPCSCRQQ" FT CDS 1774..2016 FT /codon_start=1 FT /transl_table=1 FT /product="8.4 kDa hypothetical protein" FT /db_xref="InterPro:IPR003411" FT /db_xref="UniProtKB/TrEMBL:Q05JE4" FT /protein_id="BAF34857.1" FT /translation="MYCLFGILVLVGIAIAIQILAHVDNSSGSHQGCFIRATGESILIE FT NCGPSEALASTVREVLGGLKALGISHTTEEIVYRC" FT CDS 2026..2805 FT /codon_start=1 FT /transl_table=1 FT /product="coat protein" FT /db_xref="GOA:Q05JE3" FT /db_xref="InterPro:IPR000052" FT /db_xref="UniProtKB/TrEMBL:Q05JE3" FT /protein_id="BAF34858.1" FT /translation="MASQVGKLPGESNEAFEARLKSLELARAQKQPEGSNTPPTLSGVL FT AKRKRVIENALSKTVDMREVLKHETVVISPNVMDEGAIDELIRAFGESGIAESVQFDVA FT IDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLE FT TGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGIKRAPTKAEMVANIASFEVQ FT VLRQAMAEGKRSSNLGEISGGTAGALINNPFSNVTHE" XX SQ Sequence 2876 BP; 791 A; 542 C; 731 G; 812 T; 0 other; tcaacacgct gttctggtcc gctttgcacc ttatatgaga tacattgaga agaaactgat 60 gcaagctcta aagcctaact tctacattca ttcaggtaaa ggtctagatg agttaaacga 120 gtgggttagg gccagggggt tcactggcat ttgcacagag tcagactacg aagcctttga 180 tgcctcccag gatcacttta tcttagcatt tgagttgcag ataatgaaat ttttgggatt 240 gcctgaagat ctgattttgg attatgagtt catcaaaatt cacttggggt caaagcttgg 300 ttcattttcc ataatgaggt tcactgggga agccagcaca tttctgttca acactatggc 360 taacatgttg ttcacttttc tgcggtatga actgactggt tcagagtcaa tagcatttgc 420 aggggatgat atgtgtgcta atagaaggtt gcggcttaaa acggagcatg agggttttct 480 gaacatgatc tgccttaagg ccaaggttca gtttgtttct aaccccacat tctgtggatg 540 gtgcttgttt aaggagggaa tattcaagaa acctcaacta atttgggagc gaatatgcat 600 agccagagag atgggcaatc tggagaattg tattgacaat tatgcgatag aggtgtccta 660 tgcatataga ttgggtgagc tatcaattga aatgatgaca gaagaggagg tggaggcaca 720 ctacaattgt gtgaggttcc tggttaggaa caagcataag atgaggtgct caatttcagg 780 cctgtttgaa gtggttgatt aggccttaag tatttggcgt tgttcgagta ttatgaataa 840 tttagttaaa gcattatcag ccttcgagtt tataggtgtt ttcagtgtac tcaaatttcc 900 agttgttata catagtgtgc ctggtagtgg taagagtagt ttaataaggg agttaatctc 960 agaggacgag agtttcgtgg ctttcacagc gggtgttcca gacagtccta acctcacagg 1020 gaggtacatc aagccttact caccaggatg cgcagtgcaa ggcaaagtga atatacttga 1080 tgagtacttg tccgttcaag acatttcggg ttttgatgta ctgttttcag acccgtacca 1140 gaatatcagt attcccaaag aggcgcattt cattaagtct aagacttgta ggtttggtgt 1200 gaacacttgc aaataccttt cctctttcgg tttcaaagtt agcagcgacg ggctggacga 1260 cgtcattgtg ggatcgccct tcactctaga tgttgaaggg gtgctgatat gttttggcaa 1320 ggaggcggta gatctcgctg ttgcgcacaa ctctgaattc aagttaccgt gtgaggttcg 1380 aggttcaacc ttcaatgtgg taaccctttt gaaatcaaga gacccaaccc cagaggacag 1440 gcactggttt tacatcgctg ccacaagaca taggaagaaa ttggtcatta tgcagtaaaa 1500 tgccttttca gcagcctgct aattgggcaa aaaccataac tccattgact attggcttag 1560 gaattggact tgtgctgcat tttctgagaa agtcaaatct accatattca ggagacaaca 1620 tccatcaatt tcctcacggg gggcgttacc gggacggcac aaaaagtatc acttactgtg 1680 gccctaagca gtccttcccc agttcaggag tttttggtca gtctgagaat tttgtgccct 1740 taatgcttgt cgtaggtcta attgcattca tacatgtact gtctgtttgg aattctggtc 1800 ttggtaggaa ttgcaattgc catccaaatc cttgctcatg tagacaacag tagtggcagt 1860 caccaaggtt gctttatcag ggccactgga gagtctattt tgattgaaaa ttgtggccca 1920 agcgaggccc ttgcatcaac agtgagggag gtgttgggag gtttgaaggc tttaggaatt 1980 agccatacta ctgaagaaat tgtttatcgt tgttaaattg gttaaatggc gagtcaagtt 2040 ggtaagctcc ccggcgaatc aaatgaggca tttgaagccc ggctgaaatc actggagttg 2100 gctagagctc aaaagcagcc agaaggctca aacacaccgc ctactctcag tggtgtgctc 2160 gccaaacgta agagggttat tgagaatgca ctctcaaaga cagtggacat gagggaggtg 2220 ttgaaacacg aaacggttgt gatttctcca aatgtcatgg atgagggtgc aatagatgag 2280 ctgattcgtg catttggaga atcaggcata gcagagagcg tacaatttga tgtggccata 2340 gatatcgcac gtcactgctc tgatgttgga agctcccaaa gatcaacctt gattggcaaa 2400 agcccattct gtgatctgaa tagatcagaa attgctggga ttataaggga ggtaaccacg 2460 ttgcgtagat tttgcatgta ctatgcaaaa atcgtgtgga atatccatct ggagacgggg 2520 ataccaccag ctaattgggc caagaaaggg tttaatgaga atgaaaaatt tgcagccttt 2580 gacttctttc tgggagtcac agatgagagt gcgcttgaac caaagggtgg aatcaaaaga 2640 gctccaacaa aagctgagat ggtcgctaat atcgcctctt ttgaggttca agtgctcaga 2700 caagctatgg ctgaaggcaa gcggagttcc aaccttggag agattagtgg tggaacggct 2760 ggtgcactca tcaacaaccc cttctcaaat gttactcatg aataaggagg atgaagctga 2820 tggcaattcc gtaattcaat aattccccga tttcaaggct gggttaagcc tgttcg 2876 //