ID AB274027; SV 1; linear; genomic RNA; STD; VRL; 4090 BP. XX AC AB274027; XX DT 12-MAY-2007 (Rel. 91, Created) DT 01-NOV-2007 (Rel. 93, Last updated, Version 2) XX DE Zucchini lethal chlorosis virus Gn/Gc gene for glycoprotein precursor, DE complete cds. XX KW . XX OS Zucchini lethal chlorosis virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Tospoviridae; Orthotospovirus. XX RN [1] RP 1-4090 RA Nagata T., Nagata A.K., De Avila A.C., Resende R.d., Lovato F.A., RA Carvalho K.R., Sodre R.d.; RT ; RL Submitted (11-SEP-2006) to the INSDC. RL Tatsuya Nagata, Universidade Catolica de Brasilia, Pos-graduacao em RL Ciencias Genomicas e Biotecnologia; SGAN 916, Modulo B, Brasilia, Distrito RL Federal 70790160, Brazil (E-mail:tatsuya@pos.ucb.br, Tel:55-61-34487169, RL Fax:55-67-33474797) XX RN [2] RX DOI; 10.1007/s11262-007-0107-y. RX PUBMED; 17570049. RA Nagata T., Carvalho K.R., Sodre R.D.A., Dutra L.S., Oliveira P.A., RA Noronha E.F., Lovato F.A., Resende R.O., Avila A.C., Inoue-Nagata A.K.; RT "The glycoprotein gene of Chrysanthemum stem necrosis virus and Zucchini RT lethal chlorosis virus and molecular relationship with other tospoviruses"; RL Virus Genes 35(3):785-793(2007). XX DR MD5; f383bc834d5afa63486299372b3974e6. DR EuropePMC; PMC3371012; 22715400. XX FH Key Location/Qualifiers FH FT source 1..4090 FT /organism="Zucchini lethal chlorosis virus" FT /mol_type="genomic RNA" FT /country="Brazil:Sao Paulo State" FT /isolation_source="Zucchini isolate 1038" FT /db_xref="taxon:83872" FT CDS complement(598..4005) FT /codon_start=1 FT /transl_table=1 FT /gene="Gn/Gc" FT /product="glycoprotein precursor" FT /function="membrane proein" FT /db_xref="GOA:A5A796" FT /db_xref="InterPro:IPR005167" FT /db_xref="InterPro:IPR014414" FT /db_xref="UniProtKB/TrEMBL:A5A796" FT /protein_id="BAF62147.1" FT /translation="MKLLNLLELMIKVSLFTFALSSVLLAFLVLRATDAKVEIIRGDHP FT EVYDDSSENEIPSAVLMQQKGALLESRNPMLGNKENRSRREQDEGFTETSRISSSSQRT FT ISVLDLPNNCLNASFLKCEIKGISTFNVYYQVESDGVIYSCVSDSTDGLSRCDNSQNLP FT KKFSEVPVIPITRLDNKRHFAVGTKFFVSESLFHGNYPITYNSYPTNGTVSLQTVKLSG FT DCKIAKSNFANPYTVSISSPEKVMGYLIKKPGENAEHKVMSFTGSTSVTFSEEALDGNH FT NLLCGDKSAKIPKTNKRVRDCIVKYSKSIYKQTACINFSWIRLFLIAFLIYFPIRWLVN FT KTTKPLFLWYDLMGLVNYPILLAINYSWKYFPLKCSTCGGLCVITHECTKKCVCNKSKA FT SKEHSSECPILSTEVESEYNEHKWTSMEWFHLIVNTKLSLNFLKFLTEILIGLVILSQM FT PMTMAQTTQCLSGCYYVPGCPYLVSGKFESCPEKDQCYCKITKDTIVETIFGSNVVIEG FT PNDCIPHQDCPSLKSINSLIKCRLGCEYLDLFLNKPLFKGFSDYSGNALGLDAVSLYVT FT KRLRNGMLDSYNGTERLSGIIAGDSLATNGTEIPENILPRQSLIFNSIVDGKYRYMIEQ FT SLLGGGGTVFMLNDKTSEAAKKFVIYIKSVGVHYKVSEKYTTAPIQSTHTDYYSTCAGN FT CETCRKTQKLTGFQDFCITPTSYWGCEEIWCFAIDEGATCGFCRNVYDMDKSYRIYSVL FT KSTIVADVCISGILGSQCTLITEEVPYENSIFQADIQADLHNDGITIGELIAHGPDSHV FT YVGNIANLNDPVKMFGHPQLTHDGVPIFTKKTLEGEDLSWDCAAIGKKSVTIKTCGYDT FT YRFQSGLEQISDTPVTFKDFTSFYLEKNFNLGKLKVIIDLPSDLFKVAPKKPSITSTKL FT ECNGCLLCAQGLSCKLEFLSDIVFSSAIFLSSCSLSTYQLAVKKGLNKYNITMYCSLNP FT DKKKLMFYPEGNPDLSIELLVNNVVVKEPENIIDQNDEYAHEEQQYNSDSSAWSFWDYV FT KSPFNFIASYFGSFFDTIRVVLLIAFLFVVVYFCSMLATICRGYVKNKSYRSRSKPEDD FT DEPEVKIPMLTKDTMTRRRPPMDFSHLV" FT 3'UTR 4006..4090 XX SQ Sequence 4090 BP; 1300 A; 782 C; 731 G; 1277 T; 0 other; agtgttatgt attcctggac aaaaagaatt ctgtgactct cctagagcag atctagagaa 60 aagctgcaca atgtttcctc taaacagagc tattagagct agatcccaag catttataga 120 agcatgcaag ctcattattc ccaaggggaa tagtgaaaag ttcattagaa aacagctgca 180 agaactcagc actaatctag agaaatctgt taaagaagaa gaggaagtat cagagaatgt 240 tgcaaagctg acttttgaag acgagatatg agcttatgtt agttaactac tttaaatgta 300 atgtaaccta ttttacagaa tccaaaatcc aaaaaaaaga gaaaaaccca aaacaacaaa 360 aaaagaagaa aaatcaaaac aacaaaaata aataaggctg aaaagccaaa ttttggtccg 420 aagactcttt tttttgtttt ttgttgtttt ttatttattt tattcttttt atataagttt 480 agctgattta gatatattta acaaagctaa taccttgact taaacaaact tactggtaac 540 ttgtaacggc attacatatt gttaaaacat aagatagtgc atgtatgttc tacaagctca 600 aacaagatgg gagaaatcca tgggaggcct cctccttgtc attgtatctt tagtcaacat 660 agggatcttt acttctggct catcgtcatc ttccggtttt gatctggatc tgtaagactt 720 gttcttaaca taacctctgc atatggttgc cagcatagag caaaaataca ctacaacgaa 780 taagaatgct attagaagaa caactctaat agtatcaaag aatgatccaa aatagctagc 840 aataaaattg aatggacttt taacatagtc ccagaagctc caagcagatg aatctgaatt 900 gtattgttgt tcttcatgtg catactcatc attctgatca ataatattct caggttcctt 960 caccacaaca ttattcacaa gaagctcaat tgacaaatca gggtttcctt caggataaaa 1020 cattaacttc tttttgtcag gatttaaaga acagtacatt gtaatattgt atttgtttaa 1080 tccctttttg actgctagct gataagtaga taaagagcaa gaacttagaa atatggctga 1140 agagaataca atgtctgaaa gaaattctaa cttacaggac aaaccttgag cacataacag 1200 gcatccattg cactctaact tggtagaggt tatagaaggt ttttttggag ccactttgaa 1260 gagatctgaa ggaagatcta taattacttt aagcttgcct aggttgaaat tcttttctaa 1320 ataaaagcta gtgaaatctt taaaggtaac aggagtgtcc gagatttgct ccaaacctga 1380 ttggaacctg tatgtatcat acccacatgt cttaatagta acagatttct tccctatcgc 1440 agcacaatcc caagacagat cttctccttc caaagttttc tttgtgaata taggcacacc 1500 atcatgtgtc aactgagggt gaccaaacat ctttacagga tcgttcaggt tggcaatgtt 1560 ccccacatag acatgactat caggtccgtg agctataagc tcacctatag ttattccatc 1620 attgtgtaga tctgcctgaa tatcagcctg gaaaatggaa ttctcataag gtacttcctc 1680 tgttatcagg gtgcactggc ttcctaagat accagatatg catacatcag ccacaattgt 1740 tgactttaaa acagaataga tcctgtacga cttatccatg tcataaacat tcctgcaaaa 1800 gccacatgta gctccttcat caatagcaaa acaccagatc tcttcacagc cccaatacga 1860 tgtaggagtt atacaaaagt cctggaaccc agtcaatttc tgagttttcc tgcaagtttc 1920 acaatttccg gcacatgtgg aatagtaatc tgtgtgagta ctctgtatag gagcagttgt 1980 gtatttctca gaaactttgt aatgaacccc aacactttta atgtaaataa cgaatttttt 2040 agctgcttct gacgttttat cattcagcat gaacactgta ccgccaccac cgagtaatga 2100 ttgctcaatc atgtatctat atttcccatc aacaatggaa ttgaaaatca atgattgcct 2160 tggcaaaatg ttctcaggta tctctgtgcc gtttgttgct aaggaatcac cagcaatgat 2220 ccctgaaagt ctttctgtgc cattatatga gtccagcatg ccatttctaa gccttttagt 2280 gacatataag ctaactgcat ctaaacccaa agcatttcct gagtaatcag aaaacccttt 2340 aaatagaggc ttgttgagaa acaagtctag atactcgcaa cctaacctgc atttaataag 2400 gctgtttata gatttgaggc tcgggcaatc ttggtgcggt atgcagtcat taggtccttc 2460 aataactaca ttggagccga agattgtttc aacaattgta tctttcgtta ttttgcaata 2520 gcattgatct ttctcagggc aactttcaaa cttgccagaa acaaggtaag ggcatcctgg 2580 aacatagtaa cagccactga gacattgtgt agtttgagcc atggtcattg gcatctgtga 2640 caagatgact agacctatca aaatttctgt taagaatttc aaaaagttca gactcaattt 2700 tgtgttaact attagatgga accattccat gctagtccat ttatgctcat tatactcact 2760 ctcaacttct gtagataata tggggcattc agaagaatgt tcctttgaag ctttactttt 2820 gttgcagaca cattttttag tgcattcgtg agtgatcaca cataatccac cgcaagtaga 2880 acactttagt ggaaagtatt tccaagaata atttatagcc aacaatatgg ggtaattgac 2940 cagacccatg agatcatacc aaagaaacaa gggctttgta gttttattta ctaaccatcg 3000 tattgggaaa tagatcaaga aagcaataag aaatagtctg atccatgaga agttaataca 3060 tgctgtttgc ttgtaaatac tcttagagta cttgacaatg caatccctaa ctcttttatt 3120 ggtttttggt atttttgcag atttatcacc acacaacaag ttatggtttc catccaatgc 3180 ttcctcactg aaagtcacac ttgtagaacc agtgaaggac atgactttgt gttcagcatt 3240 ctcgccaggc ttctttatga ggtaacccat aaccttttct ggactgctaa tgcttacagt 3300 gtagggattg gcaaagttgg attttgcaat tttgcaatct ccagataatt taacagtttg 3360 caatgacaca gttccatttg tcgggtatga gttataagtt atagggtagt tgccatgaaa 3420 caagctttct gaaacaaaaa actttgttcc aactgcaaaa tgccttttat tgtcaagtct 3480 tgttatagga attaccggaa cttcggaaaa tttcttcggt aagttttgag agttatcaca 3540 tctgctcaaa ccatctgtgg agtcagacac acaagaatag ataacaccat cactctcaac 3600 ctggtagtaa acattgaaag tggaaattcc ctttatctcg cacttcaaaa acgaggcgtt 3660 cagacagttg tttggcagat ctaaaactga tatggttctt tgagagcttg agctaattct 3720 tgaagtttct gtaaagcctt catcttgctc ccgtctagac ctgttttctt tatttcccaa 3780 catgggattc cttgactcca aaagagctcc cttttgctgc atcaaaactg cagaaggtat 3840 ttcattctca gatgagtcat cataaacttc gggatgatct cctcgaatta tttcaacttt 3900 agcatccgtg gctctgagaa ctaggaatgc caggaggaca gaacttaatg caaaagtgaa 3960 caggctcact tttatcatta gttctaatag attaagtaac ttcatcttta acgatgcagt 4020 agagctgtga tgttgatgtg ggtattttca agttgtctag atgtagattt ttgtttgcac 4080 tgattgctct 4090 //