ID AB274026; SV 1; linear; genomic RNA; STD; VRL; 4088 BP. XX AC AB274026; XX DT 12-MAY-2007 (Rel. 91, Created) DT 01-NOV-2007 (Rel. 93, Last updated, Version 2) XX DE Chrysanthemum stem necrosis virus Gn/Gc gene for glycoprotein precursor, DE complete cds. XX KW . XX OS Chrysanthemum stem necrosis virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Tospoviridae; Orthotospovirus; OC Chrysanthemum stem necrosis orthotospovirus. XX RN [1] RP 1-4088 RA Nagata T., Nagata A.K., De Avila A.C., Resende R.d., Lovato F.A., RA Carvalho K.R., Sodre R.d.; RT ; RL Submitted (11-SEP-2006) to the INSDC. RL Tatsuya Nagata, Universidade Catolica de Brasilia, Pos-graduacao em RL Ciencias Genomicas e Biotecnologia; SGAN 916, Modulo B, Brasilia, Distrito RL Federal 70790160, Brazil (E-mail:tatsuya@pos.ucb.br, Tel:55-61-34487169, RL Fax:55-67-33474797) XX RN [2] RX DOI; 10.1007/s11262-007-0107-y. RX PUBMED; 17570049. RA Nagata T., Carvalho K.R., Sodre R.D.A., Dutra L.S., Oliveira P.A., RA Noronha E.F., Lovato F.A., Resende R.O., Avila A.C., Inoue-Nagata A.K.; RT "The glycoprotein gene of Chrysanthemum stem necrosis virus and Zucchini RT lethal chlorosis virus and molecular relationship with other tospoviruses"; RL Virus Genes 35(3):785-793(2007). XX DR MD5; 30d41cff82a53f47da211969c7173689. DR EuropePMC; PMC3371012; 22715400. XX FH Key Location/Qualifiers FH FT source 1..4088 FT /organism="Chrysanthemum stem necrosis virus" FT /mol_type="genomic RNA" FT /country="Brazil:Sao Paulo State" FT /isolation_source="Chrysanthemum isolate, Chry-1" FT /db_xref="taxon:83871" FT CDS complement(598..4005) FT /codon_start=1 FT /transl_table=1 FT /gene="Gn/Gc" FT /product="glycoprotein precursor" FT /function="membrane proein" FT /db_xref="GOA:A5A795" FT /db_xref="InterPro:IPR005167" FT /db_xref="InterPro:IPR014414" FT /db_xref="UniProtKB/TrEMBL:A5A795" FT /protein_id="BAF62146.1" FT /translation="MRLLKLMELVVKVSLFTIALSSVLLAFLVFRATDAKVEVSRGDHL FT EIYDDSAENEVPTAASIQQKAILETLTNLMLETQTVKSRQERDEESTTTTNLGSSTQKT FT ISVFDLPNNCLNASMLKCEIKGISTYNVYYQVENNGVIYSCVSDSTDGLSKCDNSQNLP FT KKFSEVPVIPITRLDNKRHFSVGTKFFVSESLTHDNYPITYNSYPTNGTVSLQTVKLSG FT DCKITKSNFANPYTVSITSPEKIMGYLIKKPGEDVEHKVVPFSGSASITFSEEMLDGDH FT NLLCGDRSAKIPKTNKKVRDCIIKYSKSIYKQTACINFSWIRLILIALLIYFPIRWLVN FT KTVKPLFLWYDLMGLVTYPILLVINYLWKYFPFKCANCGGICIVTHECTKRCVCNKSKA FT SKEHSSECPILSKETEHEYKKHKWTSMEWFHLIVNTKLSLSLLKFITEVLIGLVILSQM FT PMTMAQTAQCLSGCFYVPGCQFLVTNKFEKCPEKDQCYCNVKEDKIIESIFGTNIVIEG FT PNDCIPNQNCFPSLSINSLIKCRLGCEYLDLFLHKPLYNGFPDYTGSSLGLTSVGLYVT FT KRLRNGILDSYNSTDKLSGMVAGDSLDRNDTNIPENILPRQSLIFNSIVDGKYRYMIEQ FT SLLGGGGTVFMLNDKTSESAKKFVIYVKSAGIHYEVSEKYTTAPIQSTHTDFYSTCTGN FT CGNCRKNQALTGFQDFCITPTSYWGCEEAWCFAINEGATCGFCRNVYDMDKSYRIYSVL FT KSTIVADICVSGILGSQCTTITGEVPYEGTMFQADIQADLHNDGITIGELIAHGPDSHV FT YAGNIANMNDPVKMFGHPQLTHDGIPVFTKKTLEGDDLTWDCAAIGKKSVTIKTCGYDT FT YRFKSGLDQISDVPVTFKDFSSFYLEKNFNLGKLKVVIDLPSDLFKVAPKKPSITSTKL FT ECTGCLLCGQGLFCNLEFSSDLIFSTTIYVDSCSLSTYQLAVKKGSNKYNLTMYCSVNP FT DKKKMVLYPEGNPDLSVEVLVNNVVIKDPENIIDQNDEYAHEEQQYNSDSSAWGFWDYI FT KSPFNFIASYFGSFFDTIRVILLIAFIFLIVYFCSILTTICKGYVKNKSYKSREKVEDD FT DDSEIKIPMLTKDTMTRRRPPMDFSQLV" FT 3'UTR 4006..4088 XX SQ Sequence 4088 BP; 1355 A; 717 C; 664 G; 1352 T; 0 other; agtgtaatgt attcttggac aaaagaattt tgtgattcac ctagagctga taaagacaaa 60 agttgcatga ttattcctct gaatagagcc atcagagcca gatctcaagc tttcattgaa 120 gcttgtaagt tgataattcc taaaggtaat agtgaaaaac aaataaggaa acagctcaag 180 gatcttagct caaacttaga gagatctgtt gaagaagaag aggaaggagt ttctgagaac 240 attgctaaac tttcttttat tgatgaggtg taactcaaaa taaagtatta acaaacatgt 300 ataatattat ataatataaa catagaagcg acaaaaaaca aaaaacaaaa aaagacaaaa 360 aaagagaaaa aattacaaaa taacaaaaaa agagaaaagc aaacaaaaaa ccaaaacaaa 420 ataaggctga aaagccaaat tttggtccga agactctttt ttgttttttg tttgttttat 480 ttatttttat ttattttatc tatttgctta tttaaattaa gttgaatacc cgtaatactc 540 cttattatat ctatactaaa taaatagaat aaatttacta aagctattta gaactactta 600 aactaattgg gagaaatcca taggtggcct tcttcttgtc atagtgtctt tcgtcaacat 660 agggatcttg atctctgaat catcatcatc ttccaccttt tctcttgatt tgtatgattt 720 atttttcaca taacctttgc atatagtcgt caatatagaa caaaaatata cgatcagaaa 780 gataaaagca atcaacaaga taactcttat agtgtcaaag aaagagccaa agtagcttgc 840 aatgaaattg aaagggcttt ttatataatc ccaaaaaccc caggctgatg aatctgaatt 900 atattgttgt tcttcatgtg catactcatc attctgatca ataatgtttt caggatcttt 960 aatcactaca ttatttacca aaacctcaac tgacaaatca ggattgcctt caggatacaa 1020 aaccatcttc tttttatcag ggtttacaga acagtacatt gtcaggttgt atttgttaga 1080 tccttttttt acagctaact gatatgtgga caaagagcag gaatctacat aaatagtagt 1140 agagaatatt aggtcagagg aaaactctaa attgcaaaac aacccttggc cacaaagaag 1200 acaacctgta cactcaagtt ttgttgaggt tatggaaggc tttttaggag ccactttgaa 1260 gaggtctgaa ggtaaatcga taactacttt aagctttcct agattgaaat tcttttctag 1320 ataaaaacta gaaaaatctt tgaaagtaac aggaacatca gatatttggt ctaaaccaga 1380 tttaaatcta tatgtgtcat agccacatgt ttttatagtt acagatttct ttcctatagc 1440 tgcacaatcc caagtaagat catctccttc taatgtcttc tttgtgaaca caggaattcc 1500 atcatgagta agttgtggat gcccaaacat cttgactgga tcattcatat ttgcaatatt 1560 tcctgcataa acatgactat caggtccatg ggcaataagc tcacctatag ttattccatc 1620 attatgcaaa tctgcttgaa tgtcagcctg gaacatagtg ccttcatatg gtacttctcc 1680 agtgattgta gtacattggc tccctaaaat cccagaaaca caaatatcag ctacgattgt 1740 tgattttagc acagagtaaa tcctatatga cttatccata tcataaacat tcctacaaaa 1800 accacatgtt gcaccttcat tgatagcaaa acaccacgct tcttcacagc cccaataaga 1860 agtaggagtt atacaaaagt cttggaaccc tgttagagct tgatttttcc tacagttgcc 1920 acaattccct gtacaggtgg agtagaaatc tgtgtgtgtg ctttgtatag gagctgttgt 1980 atatttctca gaaacttcat aatgaatccc cgcactcttt acataaataa caaatttctt 2040 tgctgactct gaagttttat cattaagcat gaaaacagtt ccacctcctc ccaataatga 2100 ttgctctatc atgtacctat atttcccatc aacgattgaa ttgaatatta atgactgtct 2160 tggtagtata ttttctggta tatttgtatc atttctgtcc aatgagtcac cagcaaccat 2220 ccctgataat ttatccgtac tgttatacga gtctagtatg ccatttctca atctcttcgt 2280 aacatataat ccaaccgatg ttaatcccaa agaacttcct gtgtagtctg ggaagccatt 2340 gtatagaggt ttatgcaaga atagatctaa atactcacaa cctagtctgc attttataag 2400 actatttata gacaagctgg gaaaacaatt ttgatttgga atacaatcat taggtccttc 2460 aatgacaatg ttagttccaa aaatgctttc aatgatttta tcttctttca cattgcaata 2520 acattggtct ttttctgggc atttctcaaa cttgttggta actaagaatt ggcatccagg 2580 aacataaaaa caaccactta gacactgagc tgtttgagcc atagtcatgg gcatttgtga 2640 caagataact aaccctataa gaacctctgt aataaatttc aataaactca aactcaattt 2700 agtgttcaca attagatgga accattccat acttgtccat ttgtgttttt tatattcatg 2760 ttctgtttct tttgagagga ttggacattc agaggaatgt tcttttgaag ctttgctttt 2820 gttgcaaaca catctcttag tacattcatg ggtaacaatg cagattcctc cacaattggc 2880 acatttgaaa gggaaatact tccagagata gtttatgact agcaagatgg gatatgtgac 2940 taaacccatt aaatcatacc acagaaatag aggtttaacc gttttattca ctaaccatct 3000 aatagggaaa tagatcagga gagcaatgag tatcaaacgt atccatgaaa agtttataca 3060 agctgtttgc ttataaatac ttttagaata tttaattatg caatccctaa cttttttatt 3120 agtctttggt attttagctg atctgtctcc acaaagcaag ttgtgatcac catctagcat 3180 ttcttcactg aaagtgatgc ttgctgagcc agaaaaaggg acaactttat gttctacatc 3240 ttcaccaggc ttttttatca aataacccat gatcttctct gggctagtaa tgctcacagt 3300 ataaggattt gcaaaatttg attttgtgat tttgcaatca ccagaaagtt tgacagtttg 3360 caatgaaact gtaccattag ttggataaga gttatatgtt ataggataat tatcatgtgt 3420 caagctttca gaaacaaaaa actttgttcc aacagaaaaa tgtcttttat tatcaagtct 3480 tgttatcgga attacaggca cttcagaaaa tttcttgggg agattttgtg aattatcgca 3540 tttgcttaaa ccatctgtag aatctgaaac acaggaatag atcacaccat tattttcaac 3600 ttgataatag acattataag ttgatattcc ttttatctca catttaagca ttgaagcatt 3660 taagcagtta ttaggaagat caaagacaga aatagttttt tgggtactag atccgagatt 3720 tgtagtggtt gtagattctt catctcgttc ttgacgagat ttcacagttt gagtttctag 3780 catgaggttt gttaaagttt caagaatagc tttttgttgg attgaagctg cagtcggtac 3840 ctcattttca gcagagtcat cgtaaatctc taggtgatct ccacgactta cttcaacttt 3900 agcatctgtg gctctgaaaa ctaggaaagc caaaagaaca gaacttaggg caattgtaaa 3960 cagacttacc tttaccacta gttccattaa ctttagtagt ctcattctaa acgtctactc 4020 tgatttgatg gttgtctgtt tagttgtaga atgtccggat taagattttt gtttgcactg 4080 attgctct 4088 //