ID   AB267838; SV 1; circular; genomic DNA; STD; VRL; 2760 BP.
XX
AC   AB267838;
XX
DT   08-AUG-2006 (Rel. 88, Created)
DT   15-JAN-2009 (Rel. 99, Last updated, Version 2)
XX
DE   Pepper yellow leaf curl Indonesia virus-[Ageratum] DNA, segment DNA-A,
DE   complete genome.
XX
KW   .
XX
OS   Pepper yellow leaf curl Indonesia virus-[Ageratum]
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-2760
RA   Ikegami M., Sakata J.;
RT   ;
RL   Submitted (03-AUG-2006) to the INSDC.
RL   Contact:Masato Ikegami Tohoku University, Plant Pathology; Aobaku
RL   Tsutsumidori Amemiyatyou 1-1, Sendai, Miyagi 981-8555, Japan
XX
RN   [2]
RC   Publication_Status: Available-Online
RX   DOI; 10.1007/s00705-008-0254-z.
RX   PUBMED; 19015934.
RA   Sakata J., Shibuya Y., Sharma P., Ikegami M.;
RT   "Strains of a new bipartite begomovirus, pepper yellow leaf curl Indonesia
RT   virus, in leaf-curl-diseased tomato and yellow-vein-diseased ageratum in
RT   Indonesia";
RL   Arch. Virol. 153(12):2307-2313(2008).
XX
DR   MD5; a8914b922322a07857b619ffc21d99f9.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2760
FT                   /organism="Pepper yellow leaf curl Indonesia
FT                   virus-[Ageratum]"
FT                   /segment="DNA-A"
FT                   /mol_type="genomic DNA"
FT                   /country="Indonesia"
FT                   /db_xref="taxon:398060"
FT   CDS             135..488
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="AV2"
FT                   /product="moving protein"
FT                   /db_xref="GOA:Q0WX82"
FT                   /db_xref="InterPro:IPR002511"
FT                   /db_xref="InterPro:IPR005159"
FT                   /db_xref="UniProtKB/TrEMBL:Q0WX82"
FT                   /protein_id="BAF02748.1"
FT                   /translation="MWDPLVHPFPETLHGFRCMLAIKYLQSLEATYSPDTVGGEFVRDL
FT                   ICLLRCKNYAEAFHRYSVVVANVYNTPETKLRESVQSPCCCPHCPRHVVQTKSMGKSAY
FT                   ESETQILQGSKEQ"
FT   CDS             295..1071
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q0WX81"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:Q0WX81"
FT                   /protein_id="BAF02749.1"
FT                   /translation="MPKRSIDTVSSLPMSITRRRLNYASQYSLPAAAPTAPGMSYKRRA
FT                   WVNRPMNRKPRFYRGRRSSDVPRGCEGPCKVQSFEQRHDITHTGKALCVSDVTRGSGIT
FT                   HRVGKRFCVKSVYIIGKVWMDENIKSKNHTNNVMFWLVRDRRPVTTPFGFGELFNMYDN
FT                   EPSTATIKNDLRDRVQVLHRFSATVTGGQYASKEQAIVKRFFRVNNYVVYNHQEAAKYE
FT                   NHTENALLLYMACTHASNPVYATLKIRIYFYDNVTN"
FT   CDS             complement(1068..1472)
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="AC3"
FT                   /product="replication enhancer"
FT                   /db_xref="GOA:Q0WX80"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:Q0WX80"
FT                   /protein_id="BAF02750.1"
FT                   /translation="MDFRTGEYITAAQAQNGVYIWKVPNPLYFKVLRHSSRGYNTNMDY
FT                   MEIQIQFNHNLRKALGIHKCFLIFHIWTRLRPQIWHFLRVFKNNVLRYLSNLGVVSINN
FT                   VIRSVNYVLWDVLEQTVYAKQLHIIKFKLY"
FT   CDS             complement(1213..1620)
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="AC2"
FT                   /product="transcriptional activator protein"
FT                   /db_xref="GOA:Q0WX79"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:Q0WX79"
FT                   /protein_id="BAF02751.1"
FT                   /translation="MRPSSPSTSHSTQIPQKIQHKLAKKKLIRRRRIDLDCGCSYYLSI
FT                   NCHGYGFSHRGVHHCSSGAEWRLYLEGSKSPLFQGAEAQQQRVQHQHGLHGNTNPIQPQ
FT                   PEESAGDSQVFFNLPHLDSFTSSDLAFLKSI"
FT   CDS             complement(1520..2608)
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="AC1"
FT                   /product="Replication initiation protein (Rep)"
FT                   /db_xref="GOA:Q0WX78"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:Q0WX78"
FT                   /protein_id="BAF02752.1"
FT                   /translation="MPPPRRFKLQSKNYFLTYPKCSLTKEEALEQLKSLSTPVNKLFVK
FT                   ICRELHEDGSPHLHVLVQFEGKYVCTNNRFFDLVSPARSAHFHPNIQGAKSSSDVKAYM
FT                   DKDGDSIEWGEFQIDGRSARGGQHAVNEVYAQALNSGSKSDALQLIKELAPKDYVLQYH
FT                   NLSVNFDKIFTTPVDTFVSPYPSSSFDQVPEELRQWAGENVKDAAARPWRPISIVIEGE
FT                   SRTGKTMWARSLGPHNYLCGHLDLSPKVYNNDSWYNVIDDVDPHYLKHFKEFMGAQRNW
FT                   QSNTKYGKPIQIKGGIPTIFLCNPGPASSYKEYLAEDKNTALRSWALKNATFVTINEPL
FT                   YSNSTEDTAQTCEEETNPQETN"
XX
SQ   Sequence 2760 BP; 749 A; 577 C; 626 G; 808 T; 0 other;
     accgagtgcc gcgaaatttt tttaaatgtg gtcccacaag ccagcctttt gactgaccaa        60
     tcgcgttgcg tctgaaaagc ttagttagtg cgtcccgcac tataaagata gggaccaccc       120
     tccactaacc aaagatgtgg gatccgcttg ttcatccttt tccagaaacc ctacacgggt       180
     ttcgatgcat gttggctatc aagtatctgc aaagcttaga ggctacgtat tctcctgata       240
     cggttggagg tgaattcgtg agggatttaa tctgtctgtt gcggtgtaaa aattatgccg       300
     aagcgttcca tcgatacagt gtcgtcgttg ccaatgtcta taacacgccg gagactaaac       360
     tacgcgagtc agtacagtct ccctgctgct gcccccactg ccccaggcat gtcgtacaaa       420
     cgaagagcat gggtaaatcg gcctatgaat cggaaaccca gattctacag gggtcgaagg       480
     agcagtgatg ttccacgggg ttgtgaggga ccttgtaagg tccaatcctt tgaacagaga       540
     catgacataa cacatactgg gaaggccctt tgcgtttccg atgtcacaag aggtagcggt       600
     attacgcaca gagttggcaa aagattctgt gtgaaatctg tatatattat aggcaaagta       660
     tggatggacg aaaacatcaa gtcgaagaac cacacaaaca atgtcatgtt ttggctggta       720
     cgtgaccggc gacctgttac tacgccgttt ggcttcggcg agttgttcaa catgtatgat       780
     aatgaaccca gtacagcaac tatcaagaac gatcttcgtg atcgtgtgca ggtgttacat       840
     cgtttttcag ctacagtgac gggtggacag tacgcaagca aagaacaagc aatcgtgaag       900
     agatttttca gagtcaacaa ctatgttgtg tacaatcatc aggaagcagc aaaatatgaa       960
     aatcacactg aaaatgcatt attattgtat atggcatgta ctcatgcatc caatcctgta      1020
     tacgcgacat tgaaaattcg tatttacttc tacgacaatg taacaaatta ataaagcttg      1080
     aattttatta tgtgcaactg ctttgcgtac actgtctgtt caagtacatc ccacaaaaca      1140
     taatttactg atctaattac attgtttatt gacacaacgc ctaaattgga cagatatcta      1200
     agtacattgt tcttaaatac tcttaagaaa tgccaaatct gaggacgtaa acgagtccaa      1260
     atgtggaaga ttaaaaaaca cttgtgaatc cccagcgctt tcctcaggtt gtggttgaat      1320
     tggatttgta tttccatgta gtccatgttg gtgttgtacc ctctgctgct gtgcctcagc      1380
     accttgaaat agaggggatt tggaaccttc caaatataga cgccattctg cgcctgagct      1440
     gcagtgatgt actccccggt gcgaaaatcc atatccatga cagttaatac tgaggtaata      1500
     tgagcagccg cagtctaagt caattcgtct cctgcggatt agtttcttct tcgcaagttt      1560
     gtgctgtatc ttctgtggaa tttgagtaga gtggctcgtt gatggtgacg aaggtcgcat      1620
     tttttagtgc ccaagatcgt aatgcagtat ttttgtcctc tgcaagatat tctttatatg      1680
     aggaagcagg accaggattg cagaggaaga tagtgggaat tccaccttta atttgaattg      1740
     gtttgccgta ctttgtgttg ctttgccagt tcctctgggc ccccatgaac tctttaaaat      1800
     gctttagata gtgggggtca acgtcatcaa tgacgttgta ccaggagtca ttgttgtata      1860
     ccttggggct caagtcaaga tgtccgcaaa gataattatg ggggcccaat gatctagccc      1920
     acatagtttt gcctgtacga ctctcacctt ctatgacaat actaatgggc ctccatggcc      1980
     gcgcagcggc atccttcaca ttttcaccag cccattgtcg tagttcctct ggaacttggt      2040
     caaacgacga cgacggatat ggtgaaacaa atgtatctac aggtgttgta aagattttat      2100
     caaaattaac acttaaattg tggtactgta gaacatagtc ttttggagca agctctttaa      2160
     tcaattgaag agcgtcggac ttacttccag aatttagggc ctgcgcataa acttcgttta      2220
     ctgcgtgctg accacctcgt gcagatctcc catctatctg aaattctccc cattcgattg      2280
     aatcaccgtc cttgtccatg tacgccttga catcggaact tgatttagct ccctgaatgt      2340
     tcggatggaa atgtgctgac ctggctgggg ataccaggtc gaagaatcgg ttgttggtgc      2400
     agacgtattt cccttcgaat tgtacgagca catggagatg agggctccca tcttcgtgaa      2460
     gttctctaca gatcttgaca aacaacttgt tgacaggagt gctgagggat tttaattgtt      2520
     ccagtgcttc ttctttggtt agagaacact ttggatatgt aaggaaatag tttttactct      2580
     gtaacttaaa acgacgtggt ggaggcattt ggagcgtcgt tttgtattgg agacaatcct      2640
     tctatcccta tgtattggag acaggagaca atatatacaa gttctatcta caagttctat      2700
     aagggtgttt aggtaattgt gtacaccctt gaatgattaa agcggcactc gtataatatt      2760
//