ID   AB267326; SV 1; linear; genomic RNA; STD; VRL; 1527 BP.
XX
AC   AB267326;
XX
DT   04-JUL-2007 (Rel. 92, Created)
DT   04-JUL-2007 (Rel. 92, Last updated, Version 1)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: NND904J.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1527
RA   Ohshima K.;
RT   ;
RL   Submitted (28-JUL-2006) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1007/s10327-007-0003-2.
RX   AGRICOLA; IND43928796.
RA   Tomitaka Y., Yamashita T., Ohshima K.;
RT   "The genetic structure of populations of Turnip mosaic virus in Kyushu and
RT   central Honshu, Japan";
RL   J. Gen. Plant Pathol. 73(3):197-208(2007).
XX
DR   MD5; cb7f0b62a189b3f7aff23a013c45df2d.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1527
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="NND904J"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..>1527
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:A6P4N2"
FT                   /db_xref="InterPro:IPR001730"
FT                   /db_xref="InterPro:IPR009003"
FT                   /db_xref="UniProtKB/TrEMBL:A6P4N2"
FT                   /protein_id="BAF68934.1"
FT                   /translation="TDGISRHFMSEYGALEAVHHQNTNDMSKFLKLKGKWNKTLITRDV
FT                   LVICGVFGGGIWMIIQHLRSKLSEPVTHEAKGKRQRQKLKFRNARDNKMGREVHGDDDV
FT                   IEHFFGDAYTKKGKGKGRTRGLGHKNRKFINMYGFDPEDFSAVRFVDPLTGATLDDNPF
FT                   TDISLVQKHFGDIRMDLLGEDELEPDELRMNKTIQAYYMNNKTGKALKVDLTPHVPLKV
FT                   CDLHATIAGFPEREHELRQTGKAQPIDISEIPKANTELVPVDHESSSMFRGLRDYNPIS
FT                   NNICHLTNVSDGASNSLYGVGFGPLILTNRHLFERNNGELVIKSRHGEFVIKNTTQLHL
FT                   LPIPDRDLLLIRLPKDIPPFPQKLGFRQPEKGERICMVGSNFQTKSITSVVSETSTIMP
FT                   VENSQFWKHWISTKDGQCGSPMVSTKDGKILGLHSLANFQNSINYFAAFPDDFAEKYLY
FT                   TIEAHEWVKHWKYNTSAISWGSLNIQASQPAGLFKVSKLISDLDSTAVYAQ"
FT   mat_peptide     <1..63
FT                   /gene="CI"
FT                   /product="CI protein"
FT   mat_peptide     64..222
FT                   /gene="6K2"
FT                   /product="6K2 protein"
FT   mat_peptide     223..798
FT                   /gene="NIa-VPg"
FT                   /product="NIa-VPg protein"
FT   mat_peptide     799..>1527
FT                   /gene="NIa-Pro"
FT                   /product="NIa-Pro protein"
XX
SQ   Sequence 1527 BP; 493 A; 335 C; 353 G; 346 T; 0 other;
     actgacggaa tatcccgtca tttcatgagt gagtatggag cactcgaggc agttcaccac        60
     cagaacacta atgacatgag caaattccta aagcttaagg gcaaatggaa taaaacgtta       120
     atcacacgag acgtgctggt gatctgtgga gtttttggag gcggaatctg gatgataatc       180
     caacacctgc gttcaaaact ttctgaacct gtgacccatg aagcaaaagg caagaggcaa       240
     aggcagaaac taaagtttcg caacgcccga gacaacaaga tgggtagaga ggtacacgga       300
     gatgacgacg tcatagaaca cttcttcgga gacgcctaca cgaagaaggg aaagggcaaa       360
     ggcagaacac gtggcctcgg tcataaaaac aggaaattca tcaacatgta tggattcgat       420
     cctgaagact tctcagcagt taggttcgtg gatccactta ccggagccac actggacgat       480
     aatccgttta cagacatctc ccttgtgcag aagcactttg gagacatacg aatggacctg       540
     cttggagaag acgaactgga accagatgag ttgcggatga acaaaacaat tcaggcctac       600
     tatatgaaca ataaaacagg taaggccttg aaggttgatc tcacaccaca cgtaccactc       660
     aaggtgtgcg acctccatgc aaccatcgct ggtttcccgg aacgagaaca tgaacttaga       720
     caaactggta aagctcagcc aatagacata agtgaaatac ctaaggctaa tactgagcta       780
     gttccagtcg atcacgaaag tagctccatg ttcagagggt tgcgcgacta caacccaata       840
     tctaataaca tttgtcatct gacgaatgtg tcagacggag catcaaattc gttatatggt       900
     gttggttttg ggccactcat actaacgaac cggcatcttt tcgaacggaa taatggcgag       960
     ctagtgatta aatctaggca tggtgagttc gtgattaaaa acacaactca attacatttg      1020
     ctgccaattc cggatcggga tttattgtta atccgactac caaaggacat tccacctttc      1080
     ccgcaaaaac taggctttag acaacctgag aagggtgaga ggatctgtat ggtaggatcc      1140
     aactttcaaa ctaagagcat tactagtgtg gtttctgaga ccagcacgat tatgccagtg      1200
     gagaatagcc aattttggaa acattggatt agcactaaag atggccaatg tgggagccca      1260
     atggtgagca caaaggatgg aaagatacta gggttacata gcctagcaaa tttccaaaac      1320
     tccatcaact actttgctgc cttcccggat gattttgctg agaaatatct ctacactatc      1380
     gaagcacacg agtgggttaa acactggaag tacaacacta gtgcgattag ttggggctct      1440
     ttaaacatac aagcctcgca accagcaggc ttgttcaaag tgagcaaact catatcagac      1500
     ctcgacagca cagcagtgta cgcacaa                                          1527
//