ID   AB267316; SV 1; linear; genomic RNA; STD; VRL; 1527 BP.
XX
AC   AB267316;
XX
DT   04-JUL-2007 (Rel. 92, Created)
DT   04-JUL-2007 (Rel. 92, Last updated, Version 1)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: ISD092J.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1527
RA   Ohshima K.;
RT   ;
RL   Submitted (28-JUL-2006) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1007/s10327-007-0003-2.
RX   AGRICOLA; IND43928796.
RA   Tomitaka Y., Yamashita T., Ohshima K.;
RT   "The genetic structure of populations of Turnip mosaic virus in Kyushu and
RT   central Honshu, Japan";
RL   J. Gen. Plant Pathol. 73(3):197-208(2007).
XX
DR   MD5; 25d8e48425eb4750f987029289fbd799.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1527
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="ISD092J"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..>1527
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:A6P4M2"
FT                   /db_xref="InterPro:IPR001730"
FT                   /db_xref="InterPro:IPR009003"
FT                   /db_xref="UniProtKB/TrEMBL:A6P4M2"
FT                   /protein_id="BAF68924.1"
FT                   /translation="TDGISRHFMSEYGALEAVHHQNTNDMSKFLKLKGKWNKTLITRDV
FT                   LVICGVFGGGIWMIIQHLRSKLSEPVTHEAKGKRQRQKLKFRNARDNKMGREVYGDDDV
FT                   IEHFFGDAYTKKGKSKGRTRGLGHKNRKFINMYGFDPEDFSAVRFVDPLTGATLDDNPF
FT                   TDISLVQKHFGDIRMDLLGEDELEPNELRMNKTIQAYYMNNKTGKALKVDLTPHVPLKV
FT                   CDLHATIAGFPEREHELRQTGKAQPIDISEIPKANTELVPVDHESSSMFRGLRDYNPIS
FT                   NNICHLTNVSDGASNSLYGVGFGPLILTNRHLFERNNGELVIKSRHGEFVIKNTTQLHL
FT                   LPIPDRDLLLIRLPKDIPPFPQKLGFRQPEKGERICMVGSNFQTKSITSVVSETSTIMP
FT                   VENSQFWKHWISTKDGQCGSPMVSTKDGKILGLHSLANFQNSINYFAAFPDDFAEKYLC
FT                   TIEAHEWVKHWKYNTSAISWGSLNIQASQPAGLFKVSKLISDLDSTAVYAQ"
FT   mat_peptide     <1..63
FT                   /gene="CI"
FT                   /product="CI protein"
FT   mat_peptide     64..222
FT                   /gene="6K2"
FT                   /product="6K2 protein"
FT   mat_peptide     223..798
FT                   /gene="NIa-VPg"
FT                   /product="NIa-VPg protein"
FT   mat_peptide     799..>1527
FT                   /gene="NIa-Pro"
FT                   /product="NIa-Pro protein"
XX
SQ   Sequence 1527 BP; 489 A; 340 C; 354 G; 344 T; 0 other;
     actgacggaa tatcccgtca tttcatgagt gagtatggag cactcgaggc agtccaccac        60
     cagaacacca atgacatgag caaattccta aagctcaagg gcaaatggaa taaaacgtta       120
     atcacacgag acgtgttggt gatctgtgga gtttttggag gcggaatctg gatgataatc       180
     caacacctgc gttcaaaact ttctgaacct gtgacccatg aagcaaaagg caagaggcaa       240
     aggcagaaac taaagtttcg caacgcccga gacaacaaga tgggtagaga ggtatacgga       300
     gatgacgacg tcatagaaca cttcttcgga gatgcctata cgaagaaggg gaagagcaaa       360
     ggcagaacac gtggcctcgg tcataaaaac aggaaattca tcaacatgta tggattcgat       420
     cctgaagact tctcagcagt caggtttgtg gatccactca cgggggccac attagatgat       480
     aatccgttca cggacatctc ccttgtgcaa aaacactttg gagacattcg aatggatctg       540
     cttggagaag acgaactgga accaaatgag ttgcgtatga acaagacaat tcaggcctac       600
     tacatgaaca ataaaacagg taaggctctg aaagtggatt tgacaccaca cgtaccactt       660
     aaggtgtgcg atcttcacgc aaccattgct ggtttcccgg aacgagaaca cgaactcagg       720
     caaactggta aagctcagcc tatagatata agcgaaatac ccaaggctaa tactgagcta       780
     gtcccagttg accacgaaag tagctccatg ttcagaggat tgcgcgatta caacccgata       840
     tctaataaca tttgtcactt aacaaatgta tcggacggag catcaaactc gttatatggt       900
     gttggttttg ggccactcat attaacgaac cggcatcttt tcgaacggaa taacggtgag       960
     ctagtgatta aatctagaca tggtgagttt gtgattaaaa acacgactca actccattta      1020
     ctaccgattc cggatcgaga cttgctgcta atccgactac cgaaagacat cccacctttc      1080
     ccgcaaaaat taggcttcag acaacctgag aagggtgaga ggatctgtat ggtgggatcc      1140
     aacttccaaa ctaagagcat tactagtgtg gtctctgaga ctagcacaat tatgccagtg      1200
     gagaacagcc agttttggaa gcattggatt agcactaaag atggccaatg tgggagccca      1260
     atggtgagca caaaggacgg aaagatactt ggcctacata gcctagcgaa tttccaaaat      1320
     tccatcaact attttgctgc cttcccggat gattttgccg agaaatatct ttgcaccatc      1380
     gaagcacatg agtgggtcaa acactggaag tacaacacca gtgcgattag ttggggctcc      1440
     ttaaacatac aagcttcgca accagcaggc ttgttcaaag tgagcaaact catatcagac      1500
     cttgacagca cagcagtgta cgcacaa                                          1527
//