ID   AB267299; SV 1; linear; genomic RNA; STD; VRL; 1086 BP.
XX
AC   AB267299;
XX
DT   04-JUL-2007 (Rel. 92, Created)
DT   04-JUL-2007 (Rel. 92, Last updated, Version 1)
XX
DE   Turnip mosaic virus gene for polyprotein, P1 protein region, partial cds,
DE   isolate: SHD94J.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (28-JUL-2006) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1007/s10327-007-0003-2.
RX   AGRICOLA; IND43928796.
RA   Tomitaka Y., Yamashita T., Ohshima K.;
RT   "The genetic structure of populations of Turnip mosaic virus in Kyushu and
RT   central Honshu, Japan";
RL   J. Gen. Plant Pathol. 73(3):197-208(2007).
XX
DR   MD5; e426b6e36f13e42040842e8bbb3d2010.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1086
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="SHD94J"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             1..>1086
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:A6P4K5"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:A6P4K5"
FT                   /protein_id="BAF68907.1"
FT                   /translation="MAAITFAPAITNAITNKPASTGMVQFGNFPPVPLRTTIATTVATP
FT                   VAQPKLYTVQFGSLDPVVVKGGPGSSAKATRQQLSIAPGANLREAAALEVAKPKPNAVL
FT                   RMHEEANRERALFLDWETSLKRQSYGIAENEKVVITTRGVSKIVPRSSRAMKQKRARER
FT                   RRVQQPIVLKWEPQLSTLSIGGGPAANVIEAEEVRTKWPLHKTPSMKKKTVFKACRMSN
FT                   QGIDMLMRSLIKVFKAKNATIEYTAKKSINIDFVRKERTKFARIQVAHMLGRRAQRDLL
FT                   TGVEENHFIDTLSGYSGNKRSISPGVVCAGWSGIIIRDGVLTQSQSRSPSQAFVIRGEH
FT                   EGKLYDARVKVTKVMSHKIVHY"
FT   mat_peptide     1..>1086
FT                   /gene="P1"
FT                   /product="P1 protein"
XX
SQ   Sequence 1086 BP; 342 A; 255 C; 286 G; 203 T; 0 other;
     atggcagcaa tcacattcgc accagcaatc accaacgcaa tcaccaacaa accagcatcc        60
     accggaatgg tacaatttgg gaatttccca ccagtaccat tgcgaaccac catcgcaacc       120
     acagtcgcca ccccagtggc gcaacctaaa ctgtacacag tacagtttgg aagtcttgac       180
     ccagtagtcg tcaagggtgg accagggtcc tctgctaagg caacccgcca gcagcttagc       240
     atcgcaccag gtgctaacct cagggaagcc gcagctttgg aggttgcaaa acccaagccg       300
     aatgccgtgt tgagaatgca cgaggaggca aacagagagc gagcgctctt cttggactgg       360
     gaaaccagtt tgaaaaggca atcgtatggc attgctgaga acgagaaagt cgtgataaca       420
     actcgtggtg tcagcaagat agtgcccaga agttcacggg cgatgaagca aaagcgcgcg       480
     agggagaggc gcagggtaca acaaccaatt gtgttaaaat gggagccaca actgagcaca       540
     ctctctattg gaggggggcc tgccgcaaat gtaattgagg cagaggaagt gcgcacaaag       600
     tggccactac acaaaacacc gtcaatgaag aaaaagacgg tgttcaaggc gtgcagaatg       660
     agcaaccaag gaattgacat gctaatgcgt tccttgatca aggtcttcaa ggcgaagaac       720
     gccaccattg aatacacagc gaagaagtct atcaacatag actttgttag gaaggagcga       780
     acaaagttcg ccagaatcca ggtggcacat atgcttggta gaagagcaca acgtgacctg       840
     ttaactggag tggaggaaaa ccactttatt gacactctca gtggttactc aggtaacaag       900
     agatccataa gcccaggagt ggtttgtgct ggctggagtg gaataatcat tagagacgga       960
     gttctcactc aaagtcagag caggagtccg tcacaagcct ttgtgatcag aggcgaacat      1020
     gaaggcaaat tgtatgatgc cagagtcaaa gttacgaagg tcatgagtca caaaatcgtg      1080
     cactac                                                                 1086
//