ID   AB267282; SV 1; linear; genomic RNA; STD; VRL; 1086 BP.
XX
AC   AB267282;
XX
DT   04-JUL-2007 (Rel. 92, Created)
DT   04-JUL-2007 (Rel. 92, Last updated, Version 1)
XX
DE   Turnip mosaic virus gene for polyprotein, P1 protein region, partial cds,
DE   isolate: ISD090J.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (28-JUL-2006) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1007/s10327-007-0003-2.
RX   AGRICOLA; IND43928796.
RA   Tomitaka Y., Yamashita T., Ohshima K.;
RT   "The genetic structure of populations of Turnip mosaic virus in Kyushu and
RT   central Honshu, Japan";
RL   J. Gen. Plant Pathol. 73(3):197-208(2007).
XX
DR   MD5; 0c97d0d4423ea57085ae02dbb0bb64a9.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1086
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="ISD090J"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             1..>1086
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:A6P4I8"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:A6P4I8"
FT                   /protein_id="BAF68890.1"
FT                   /translation="MAAVTFAPAITNATINKPASTEMVQFGNFPPVPLRTTATTTVVTP
FT                   VAQPKLYTVQFGSLDPVVVKGGAGSSAKATRQQPNVEIDVSLREAAALEVAKPKPNAVL
FT                   RMHEEANKERALFLDWENSLKRRSYGIAENEKVVMTTRGISKIVPRSSRAMKQKRARER
FT                   RRAQQPIVLKWEPQMSQFSIGGGPAANVIEAEEVRTKWPLHKTPSTKRKTVFKTCRMSN
FT                   QGIDVLIRSLVKIFKAKNATMEYTAKKSINVDFVKRGQTKFARVQVAHLLGKRAQRDLL
FT                   TGVEENQFIDTLSNYSGNKRVINSGVVCAGWSGIVVRHGILTQKQSRSPSQAFVIRGEH
FT                   EGKLYDARVKVTKVMSHKIVHY"
FT   mat_peptide     1..>1086
FT                   /gene="P1"
FT                   /product="P1 protein"
XX
SQ   Sequence 1086 BP; 342 A; 242 C; 294 G; 208 T; 0 other;
     atggcagcag ttacattcgc accagcaatc accaacgcca ccatcaacaa accagcatcc        60
     accgaaatgg tgcagtttgg gaatttccca ccagtaccat tacgaaccac cgctactacc       120
     acagtcgtca ctccagtggc gcaacccaaa ttgtacacag tgcagtttgg aagccttgac       180
     ccagtagttg tcaagggtgg agcagggtcc tctgctaagg caacccgcca gcagcctaac       240
     gttgaaatag acgttagcct cagggaagcc gcagctttgg aggttgcgaa acccaagcca       300
     aacgccgtgt taaggatgca cgaggaagct aacaaagagc gagcgctctt cttagactgg       360
     gaaaacagtc tgaaaagacg gtcgtacggc attgctgaga acgagaaagt cgtaatgact       420
     actcgtggca tcagcaagat agtgcccaga agctcgcggg caatgaagca aaaacgcgca       480
     agagagaggc gtagggcaca acaaccaatt gtgctaaaat gggagccaca gatgagccag       540
     ttctctatcg gaggagggcc tgccgcaaat gtaattgagg cagaggaagt ccgcacgaag       600
     tggccactac acaagacacc gtcaacgaag aggaaaacgg tgtttaagac gtgcagaatg       660
     agcaaccaag gaatcgatgt gttgatacgt tccttggtta agatcttcaa ggccaagaac       720
     gccaccatgg agtacactgc taagaagtct attaatgtag actttgtcaa gagagggcaa       780
     acgaaatttg ccagagtgca agtggcacac ttgttaggaa agcgagcaca acgagacttg       840
     ttgactggag tggaagagaa tcaatttatt gacactctta gtaactactc agggaacaag       900
     agagttataa actcaggggt agtgtgtgct ggttggagtg ggatagtcgt aagacatgga       960
     attctaaccc agaagcagag taggagcccg tcacaagcat ttgtgattag aggtgagcac      1020
     gaaggtaaat tgtatgatgc cagggtgaag gtcacgaagg tcatgagcca caagatcgta      1080
     cactac                                                                 1086
//