ID AB263418; SV 1; linear; genomic RNA; STD; VRL; 3512 BP. XX AC AB263418; XX DT 23-JUN-2006 (Rel. 88, Created) DT 30-JAN-2009 (Rel. 99, Last updated, Version 3) XX DE Rice dwarf virus genomic RNA, segment S2, complete sequence, isolate Akita. XX KW . XX OS Rice dwarf virus OC Viruses; Riboviria; Reoviridae; Sedoreovirinae; Phytoreovirus. XX RN [1] RP 1-3512 RA Suzuki N.; RT ; RL Submitted (21-JUN-2006) to the INSDC. RL Contact:Nobuhiro Suzuki Okayama University, Research Institute for RL Bioresources; Chuou 2-20-1, Kurashiki, Okayama 710-0046, Japan XX RN [2] RX PUBMED; 7928290. RA Uyeda I., Suda N., Yamada H., Kudo H., Suga H., Kimura I., Shikata E., RA Kitagawa Y., Kusano T., Sugawara M., Suzuki N.; RT "Nucleotide sequence of rice dwarf phytoreovirus genome segment 2: RT completion of sequence analyses of rice dwarf virus"; RL Intervirology 37(1):6-11(1994). XX DR MD5; b1b6f828d3cef2ca36554d2d8b4dca77. XX FH Key Location/Qualifiers FH FT source 1..3512 FT /organism="Rice dwarf virus" FT /segment="S2" FT /isolate="Akita" FT /mol_type="genomic RNA" FT /country="Japan:Kyushu" FT /isolation_source="rice plant, leafhopper" FT /clone_lib="pUC18 cDNA library of viral transcripts" FT /clone="p2RD" FT /db_xref="taxon:10991" FT CDS 15..3365 FT /codon_start=1 FT /transl_table=1 FT /gene="S2" FT /product="P2 outer capsid protein" FT /db_xref="UniProtKB/TrEMBL:Q18MZ3" FT /protein_id="BAE96578.1" FT /translation="MAYPNDVRNVWDVYNVFRDVPNREHLIRDIRNGLVTVRNLTNMLT FT NMERDDQLIIAQLSNMMKSLSIGVEKAQNELSKLKTTDADRAAVLAAYQTSVLNIERNT FT MLLTGYFKQLVLDLTGYVGASVYPILPFMITGDQSMMVDSIKINMKNVFDDKHEQEIVL FT PIHPACFVSTITEDTSSVVYADGDELYSVHVRHATMTMYVNVLGETVETRQLSMIGDSI FT VPDDFAPSLLILRFSQDSVGEVFYLSHDNMKKFLGYGLEYTDKYSIFDVTRRVSTTRNK FT IPDGFCSVDGVPYLDGWFIYQPSGISADSNICAIYNSYVLDTLRYITECEVDTLRSVYD FT QTSSTAFSKTDVLTSSLLTMQSNISALSAATPQLANDVITFDSTDLLSLGTVLTVSNEF FT TADDTILSTSLAGHCQVDYSEGSPQDKSMSISVSCDSSQLASSTVHSYSADILGHGLKG FT DRNMNLMINVPGLMNPQKVTVDYVYSDGYKLNFASVVAPGAPFWINATLQLSVSPSAHN FT MLSKLTPLDNDACPGLKAQANTPVLVSMTINLDDATPALGGEVIQNCVFKIHHGDDVYS FT FVTDFDVISYTSTSGTNCLKLISSVDITSQLPSDMVIYVMNGSPDAAFISGDSVNMSSV FT DWHQSTSQTVGNYVYTTMKAYWNVTSYDVEARPYTTYVPGKVNFTAVEHADVFVDDYNT FT GVNSYVIVNSRIYYKGTPLYIEVPSGSFIKVSYFTSPLKNPTVDTYNAEISRNSAYLIK FT ANASLDSVAAMLNNISNRIDAMERLMEPTRAQQIAGVVSSIGGVISLGMPLLGAIVVTI FT GTIISIADPDKQGIDYHSVANAFMSWCQYAAVCRYEYGLLKRGDEKLDVLSFMPKRVVS FT DFKNKPDVISLPELGESVLRGSSTDYLDTGINIIYNDMQLLGQGKLSDWLNKTVSKVEN FT NAANFFERNLDKSLANKEVLPMHARVEITQTEKIGDVYRTTILYTGINEGSYLGGDVFA FT SRLGDKNILRMNGFESGPGRFKAIVESTTEVGNFRVVDWTVSGMSRYEIYAAAGEVYPS FT KDPSHADVQLLYESIVRDLTTRDGSFVLKHHDVLLLPGQLDAFEELIIKNASNYQYAFI FT GSNCSKLCA" XX SQ Sequence 3512 BP; 970 A; 735 C; 813 G; 994 T; 0 other; ggcaaaacct cgcgatggct tatcctaacg acgtcagaaa tgtttgggat gtgtacaacg 60 tgttccggga cgtgccaaac cgtgaacatt tgattcgaga tatccgcaat gggctggtta 120 cggtccggaa tctcacaaat atgcttacta atatggagcg cgatgatcag ttgatcattg 180 ctcaactatc caatatgatg aaatcgctat ctattggggt tgagaaggct caaaatgaac 240 ttagcaaact gaagactacg gatgccgacc gtgccgcagt cttagcagct taccaaactt 300 cggtccttaa catagagcga aacactatgt tattgactgg gtacttcaag cagttagtct 360 tagacttaac tggctatgta ggtgccagcg tatatcctat cttacctttc atgattacag 420 gggatcagtc tatgatggtt gactccatta agattaacat gaaaaatgta tttgatgata 480 agcatgagca ggagatagtc ctacctattc atcccgcttg ctttgtgtcg accatcactg 540 aggacacttc ttccgtagta tacgccgacg gagatgaact gtattcagtg cacgttaggc 600 acgcaactat gactatgtat gtcaatgtgc ttggtgagac cgtcgagacc aggcagctgt 660 ctatgatagg cgactccatc gttcctgatg atttcgcgcc ttccttgctg atattaagat 720 ttagtcaaga ttcagtcggg gaggtcttct atcttagtca tgacaatatg aaaaagtttc 780 taggctacgg tcttgaatat accgacaagt acagtatatt cgacgtaacc agacgtgtat 840 ccacgacacg taataagata cctgatggat tctgctctgt tgatggcgtg ccgtatcttg 900 atggatggtt catttatcaa ccgagcggaa ttagcgcgga tagtaatatc tgtgctatat 960 ataattcata tgttttagat acgcttagat atattactga gtgtgaagtt gatacgttaa 1020 ggtcggtgta cgaccaaact tcgtcaactg cattctcaaa gaccgatgta ttgacatcga 1080 gtctgctaac catgcaaagt aacatttcag ctttatctgc cgccactccc cagttagcga 1140 atgatgtaat cacattcgat tctaccgatc tactctctct tgggacagta ttgaccgtat 1200 cgaatgagtt tacagctgat gatacaatat taagcactag tcttgcaggt cactgccaag 1260 ttgactacag cgagggatcg cctcaagaca agagtatgag tatatctgta agttgtgatt 1320 catcgcagct tgcgtcatct actgtccatt cctactcagc tgacatactg gggcatggac 1380 tcaagggtga ccgaaatatg aacttaatga taaatgtacc tggacttatg aacccccaga 1440 aagtaacggt tgactatgtc tattcggatg gttacaaact gaactttgct tcagtggttg 1500 cccccggcgc gcctttctgg attaacgcaa ctctgcagct tagtgtgtcg ccttccgcac 1560 acaacatgct gagtaagtta acaccgttgg ataatgatgc atgccctggg cttaaagctc 1620 aggcaaatac gcccgtactt gtatccatga ccattaatct tgatgacgcc actcctgcct 1680 tgggaggaga ggtgattcaa aattgtgtgt tcaagataca ccacggcgat gatgtgtata 1740 gctttgtcac cgacttcgat gtcattagtt atacctcaac gtctggaacc aattgtttga 1800 agcttatatc aagcgtggat atcaccagtc agcttccctc tgacatggtg atctacgtta 1860 tgaatgggtc gcccgatgct gcttttatat ctggtgattc cgttaatatg tcatcagtgg 1920 actggcacca gtccacaagc cagactgtgg gaaattatgt ctacaccacg atgaaggcct 1980 attggaacgt aacgtcgtat gatgttgagg ctcgtcctta caccacgtac gtacctggaa 2040 aagttaactt tacagccgta gagcacgctg atgtttttgt agatgactac aacaccggcg 2100 ttaactcgta tgtgattgta aatagcagaa tatattataa gggaacccct ctatatattg 2160 aggtaccaag tggctcattc atcaaggtga gctacttcac aagccctttg aaaaacccta 2220 ctgtggacac ttacaacgct gaaatctctc gcaattcagc gtatctaatt aaagcaaatg 2280 cttcattaga ttcagtggcc gcaatgctca acaatatatc gaatcggatc gacgcaatgg 2340 aacgtttgat ggagcccaca cgtgcgcagc agattgcagg agtagtctca agcataggtg 2400 gagtcatctc actcggtatg ccattgctcg gagcgatcgt ggtaaccatc ggtactatta 2460 tctccattgc tgacccagac aaacagggca ttgattacca ttcggtggct aatgccttta 2520 tgtcctggtg ccagtatgca gcggtctgta ggtatgaata tggacttctg aagcgtggag 2580 atgagaaact agatgtgttg tcatttatgc cgaaacgtgt cgtgtcggat ttcaagaata 2640 aacccgacgt tattagtctc ccagaattag gtgaatcagt actacgtgga tcaagcactg 2700 actatctaga cacggggatt aatatcattt ataatgatat gcaactgctt ggacaaggca 2760 aactctctga ctggctcaac aaaactgtga gcaaggtgga gaataacgct gccaacttct 2820 ttgagaggaa tttggataaa agtcttgcga ataaggaagt cctaccgatg catgctcgag 2880 ttgagattac tcaaaccgag aaaattggtg atgtgtatag gactacgatc ctatatacag 2940 ggataaatga aggatcatat ttgggtgggg atgtttttgc ttcgcggttg ggggacaaaa 3000 acatcttgcg tatgaatgga tttgaaagcg gacctggaag attcaaagct atcgtcgaat 3060 caactactga agtaggcaac tttcgcgtag ttgattggac ggtgtctgga atgtccaggt 3120 acgagattta tgctgctgcc ggtgaagtat atccgagcaa agatccctct catgctgacg 3180 tacagctgct atacgagagc atagttcggg atttaaccac tcgggatggt agcttcgttt 3240 tgaagcatca tgatgtcctg cttctgcctg ggcaacttga cgcttttgag gagctaatca 3300 taaaaaatgc ctcgaattac caatatgcgt ttattggttc aaactgttca aaattatgcg 3360 catgatgtgg tcgacatctt gactaagttc aagcgaccac aaaggtggat taaagatgat 3420 gacttcaagt tgtacatcca atctatctat gatgcattgt gatatgtacc agccagggct 3480 cagatgtatg cgtacttctg agttaaaatg at 3512 //