ID   AB254453; SV 1; linear; genomic RNA; STD; VRL; 1648 BP.
XX
AC   AB254453;
XX
DT   14-APR-2007 (Rel. 91, Created)
DT   30-JUN-2007 (Rel. 92, Last updated, Version 2)
XX
DE   Rice gall dwarf virus genomic RNA, segment S6, complete sequence.
XX
KW   .
XX
OS   Rice gall dwarf virus
OC   Viruses; Riboviria; Reoviridae; Sedoreovirinae; Phytoreovirus.
XX
RN   [1]
RP   1-1648
RA   Omura T., Hagiwara K.;
RT   ;
RL   Submitted (26-MAR-2006) to the INSDC.
RL   Toshihiro Omura, National Agricultural Research Center, Laboratory of
RL   Virology; Kannondai 3-1-1, Tsukuba, Ibaraki 305-8666, Japan
RL   (E-mail:toomura@affrc.go.jp, Tel:81-29-838-8932, Fax:81-29-838-8929)
XX
RN   [2]
RX   DOI; 10.1007/s00705-007-0948-7.
RX   PUBMED; 17426918.
RA   Moriyasu Y., Maruyama-Funatsuki W., Kikuchi A., Ichimi K., Zhong B.,
RA   Yan J., Zhu Y., Suga H., Watanabe Y., Ichiki-Uehara T., Shimizu T.,
RA   Hagiwara K., Kamiunten H., Akutsu K., Omura T.;
RT   "Molecular analysis of the genome segments S1, S4, S6, S7 and S12 of a Rice
RT   gall dwarf virus isolate from Thailand; completion of the genomic
RT   sequence";
RL   Arch. Virol. 152(7):1315-1322(2007).
XX
DR   MD5; 17be8b40f7af011ec3f492eb9a78ebe8.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1648
FT                   /organism="Rice gall dwarf virus"
FT                   /segment="S6"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:10986"
FT   CDS             25..1494
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="RGDVP6"
FT                   /product="RNA binding protein"
FT                   /db_xref="GOA:A4PBP8"
FT                   /db_xref="InterPro:IPR009873"
FT                   /db_xref="UniProtKB/Swiss-Prot:A4PBP8"
FT                   /protein_id="BAF49641.1"
FT                   /translation="MTAIVCVSLLSEKAVLVKNLTDHVKAFYESIIGRFVSGPDTITEK
FT                   RTMDSVIARKIVPSSTVILDGYGESFIRENPNATLMDIVTSSNNTAPKTTYQSIMPAMS
FT                   ALLGVPYVQGAFRHGIISKHGGKKTSLIILVVAPPSGFIRAASVGSSSSVVEVDSNATI
FT                   KLDDTVGINSAMIKNTKLVSAAGLTAMGIEEIPIKCNSLDSLIIGWSMKYFKGYVDGYK
FT                   SGVRDQATTILLNTPFKDLFVENGAGRMLPNDSFRVSESTIKNQVIEMGEGTKPDALIS
FT                   THGDVFIDSEAVFTSDEQEKYRKDKDEEFFKKCVCNHIIAGDYGNNVIIIENPPHSDVR
FT                   GLGVKYSFQVNKPELDGTESNGIKYYSKDTPQQIHDAILDVISDTNKSLLMNSKPIERT
FT                   GKEAIAVCFKNGFPKKFAMVEMEKNGVKIVGMGDSPMLVLDNYPSMLSRAEKANRKSSR
FT                   AKIDAPVVKIDTEDLDTNTLLDVIKKEVGSR"
XX
SQ   Sequence 1648 BP; 524 A; 275 C; 387 G; 462 T; 0 other;
     ggtatttttc tccagctgag caacatgact gcgattgtgt gtgtcagctt acttagtgag        60
     aaagcagtac tcgtgaagaa tttaactgat catgtgaaag cattttatga atcgatcatc       120
     ggacggtttg ttagtggacc agacactata actgagaagc gtactatgga ttctgtcatc       180
     gcaagaaaga tagttccttc atctacagtt attctcgatg gttatggcga atcgtttatt       240
     cgtgaaaatc caaacgccac gttgatggac attgtcacca gttcaaacaa cacggcacca       300
     aagacgacgt accaaagtat aatgccagca atgtcagccc ttttgggtgt tccttacgtt       360
     cagggagctt ttagacatgg cataatttca aagcatggag ggaagaaaac ttctttaatt       420
     attttagttg ttgcaccgcc gagtggtttt attcgggcag cttcagtggg gtcatcatct       480
     tcagttgttg aagtcgactc taatgccaca atcaaactgg acgatacagt tggaattaat       540
     tccgctatga ttaagaatac aaaattagtc tccgcagctg gtttgaccgc tatgggaatc       600
     gaggaaatac caattaaatg taattcattg gattcgctaa ttatagggtg gtcaatgaag       660
     tacttcaaag ggtatgtgga tggatacaag tctggtgtac gtgatcaggc tacaacaata       720
     ttgttaaata ctccatttaa agatcttttt gtagagaatg gagcaggtag aatgttgccg       780
     aacgattcat tcagagttag tgagtctacg attaaaaatc aagtaattga gatgggggaa       840
     ggtactaagc ctgatgcctt aatcagtact catggtgatg tattcataga ttctgaagcg       900
     gtgtttacat ccgatgagca agaaaagtat cgtaaagata aggacgaaga atttttcaag       960
     aagtgtgtct gtaaccatat cattgcaggt gactatggta acaatgtaat cattatagaa      1020
     aatccaccac atagtgatgt taggggatta ggggtaaagt attcgtttca ggttaataag      1080
     ccggaattgg atggaactga atcaaatggc attaaatatt actcaaagga tacgcctcaa      1140
     caaattcacg acgcgatctt agatgtaata tcagatacta acaagtcttt actgatgaac      1200
     agtaaaccaa ttgaacgaac aggcaaggaa gcgattgcag tatgcttcaa aaatggattt      1260
     cctaaaaaat tcgccatggt ggaaatggag aagaatggag taaaaattgt gggtatgggc      1320
     gattcaccta tgctagttct ggataactat ccctcgatgt tgtccagagc agagaaggct      1380
     aataggaaat catctagggc gaaaattgac gcaccagttg tcaagatcga tactgaagat      1440
     ttggacacta acacactatt ggatgtcatt aagaaggagg taggctcaag gtgactagaa      1500
     gagcggatgt attatacctt cttgtactac cggactttgg aatatctaat atctagtagg      1560
     atccgaacac gaaggctgtc taaacctaag taggattgac gccgatcatg tcgtgttgac      1620
     tgcggatggg tactggagaa aagatgat                                         1648
//