ID   AB248752; SV 1; linear; genomic RNA; STD; VRL; 2215 BP.
XX
AC   AB248752;
XX
DT   04-FEB-2006 (Rel. 86, Created)
DT   02-DEC-2008 (Rel. 98, Last updated, Version 3)
XX
DE   Cucumber mosaic virus genomic RNA, RNA3 segment, complete sequence, strain:
DE   ON.
XX
KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-2215
RA   Takami K., Takeshita M., Takanami Y.;
RT   ;
RL   Submitted (02-FEB-2006) to the INSDC.
RL   Contact:Minoru Takeshita Graduate School of Kyushu University, Faculty of
RL   Agriculture; 6-10-1 Hakozaki, Higashi-ku, Fukuoka 812-8581, Japan
XX
RN   [2]
RA   Takami K., Okubo H., Yamasaki S., Takeshita M., Takanami Y.;
RT   "A Cucumber mosaic virus isolated from Momordica charantia L.";
RL   J. Gen. Plant Pathol. 72:391-392(2006).
XX
DR   MD5; b0b0d33be5d4ef537084f586a70c86d8.
DR   EuropePMC; PMC3550734; 23637513.
DR   RFAM; RF01084; TLS-PK3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2215
FT                   /organism="Cucumber mosaic virus"
FT                   /segment="RNA3"
FT                   /host="Momordica charantia"
FT                   /strain="ON"
FT                   /isolate="CMV-ON"
FT                   /mol_type="genomic RNA"
FT                   /country="Japan:Oita Pref."
FT                   /collected_by="Takami Keiji"
FT                   /collection_date="2005"
FT                   /identified_by="Takami Keiji"
FT                   /clone="pCON3"
FT                   /note="subgroup I"
FT                   /db_xref="taxon:12305"
FT   CDS             121..960
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="3a"
FT                   /product="3a protein"
FT                   /db_xref="InterPro:IPR000603"
FT                   /db_xref="UniProtKB/TrEMBL:Q787R2"
FT                   /protein_id="BAE79158.1"
FT                   /translation="MAFQGTSRTLTQQSSAATSDDLQKILFSPEAIKKMATECDLGRHH
FT                   WMRADNAISVRPLVPEVTHGRIASFFKSGYDVGELCSKGYMSVPQVLCAVTRTVSTDAE
FT                   GSLRIYLADLGDKELSPIDGQCVSLHNHDLPALVSFQPTYDCPMETVGNRKRCFAVVIE
FT                   RHGYIGYTGTTASVCSNWQARFSSKNNNYTHIAAGKTLVLPFNRLAEQTKPSAVARLLK
FT                   SQLNNIESSQYLLTNAKINQNARSESEELNVESPPAAIGSSSASRSEAFRPQVVNGL"
FT   CDS             1258..1914
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q2L4T7"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:Q2L4T7"
FT                   /protein_id="BAE79159.1"
FT                   /translation="MDKSESTSAGRNRRRRPRRGSRSAPSSSDANFRVLSQQLSRLNKT
FT                   LAAGRPTINHPTFVGSERCKPGYTFTSITLKPPKIDRGSYYGKRLLLPDSVTEYDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVAAISAMFADGASPVLVYQYAASGVQAN
FT                   NKLLYDLSAMRADIGDMRKYAVLVYSKDDALETDELVLHVDVEHQRIPTSGVLPV"
XX
SQ   Sequence 2215 BP; 514 A; 527 C; 528 G; 646 T; 0 other;
     gtaatctaac cacctgtgtg tgtgcgtgtg tgtgtgtcga gtcgtgttgt ccgcacattt        60
     gagtcgtgct gtccgcacat tttgttttat ctttgtacag tgtgttagat ttcccgaggc       120
     atggctttcc aaggtaccag taggacttta actcaacagt cctcagcggc tacgtctgac       180
     gatcttcaaa agatattatt tagccctgaa gccattaaga agatggctac tgagtgtgac       240
     ctaggccggc atcattggat gcgcgctgat aatgctattt cagtccggcc ccttgttccc       300
     gaagtaaccc acggtcgtat tgcttccttc tttaaatctg gatatgatgt tggtgaattg       360
     tgctcaaaag gatatatgag cgtccctcaa gtgttatgtg ctgttactcg gacagtttcc       420
     actgatgctg aagggtcctt gagaatttac ttagctgatc taggtgataa ggagttatct       480
     cctatagatg gacaatgcgt ctcgttacac aaccatgatc ttcccgcttt ggtgtctttc       540
     caacctacgt acgactgtcc tatggaaacc gttgggaacc gtaagcggtg ttttgctgtc       600
     gttatcgaaa gacatggtta cattgggtat accggtacca cagctagcgt gtgtagtaac       660
     tggcaagcaa ggttttcttc taagaataac aactacactc atatcgcagc tgggaagact       720
     ctagtactgc ctttcaacag attagctgag caaacaaaac cgtcagctgt tgctcgcctg       780
     ttgaagtcgc aattgaacaa cattgaatct tcgcaatatc tgttaacgaa cgcgaagatt       840
     aatcaaaatg cgcgcagtga gtccgaggaa ttaaatgttg agagccctcc cgccgcaatc       900
     gggagttctt ccgcgtcccg ctccgaagcc ttcagaccgc aggtggttaa cggtctttag       960
     cactttggtg cgtattagta tataagtatt tgtgagtctg tacacaatac tatatctata      1020
     gtgtcctgtg tgagttgaaa cagtagacat ctgtgacgcg atgccgtgtt gagaagggaa      1080
     cacatctggt tttagtaagc ctacatcaca gttttgaggt tcaattcctc ttactccctg      1140
     ttgagcccct tactttctca tggatgcttc tccgcgagat tgcgttattg tctactgact      1200
     atatagagag tgtgtgtgct gtgttttctc ttttgtgtcg tagaattgag tcgagtcatg      1260
     gacaaatctg aatcaaccag tgctggtcgt aaccgtcgac gtcgtccgcg tcgtggttcc      1320
     cgctccgccc cctcctcctc ggatgctaac tttagagtct tgtcgcagca gctttcgcga      1380
     cttaacaaga cgttagcagc tggtcgtcca actattaacc acccaacctt tgtagggagt      1440
     gagcgttgta aacctggata cacgttcaca tctattaccc taaagccacc aaaaatagac      1500
     cgcgggtctt attatggtaa aaggttgcta ttacctgatt cagtcacgga atatgataag      1560
     aaacttgttt cgcgcattca aattcgagtt aatcccttgc cgaaatttga ttctaccgtg      1620
     tgggtgacag tccgtaaagt tcctgcctcc tcggacttat ccgttgccgc catctctgct      1680
     atgtttgcgg acggagcctc accggtactg gtttatcagt atgctgcatc tggagttcaa      1740
     gctaacaaca aattgttgta tgatctttcg gcgatgcgcg ctgatatagg cgacatgaga      1800
     aagtacgccg tcctcgtgta ttcaaaagac gatgcgctcg agacggacga gctggtactt      1860
     catgttgacg tcgagcacca acgcattccc acgtctgggg tgctcccagt ctgattccgt      1920
     gttttccaga accctccctc cgatttctgt ggcgggagct gagttggcag ttctgctata      1980
     aactgtctga ggtcactaaa cgttttacgg tgaacgggtt gtccatccag cttacggcta      2040
     aaatggtcag tcgtggagaa atccacgcca gcagatttac aaatctctga ggcgcctttg      2100
     aaaccatctc ctaggtttct tcggaaggac ttcggtccgt gtacttctag cacaacgtgc      2160
     tagtttcagg gtacaggtgc ccccccactt tcgtgggggc ctccaaagga gacca           2215
//