ID AB236321; SV 1; circular; genomic DNA; STD; VRL; 2761 BP. XX AC AB236321; XX DT 21-MAR-2007 (Rel. 91, Created) DT 03-JUN-2010 (Rel. 105, Last updated, Version 5) XX DE Honeysuckle yellow vein virus-[Japan:Fukui:2001] DNA, complete genome. XX KW . XX OS Honeysuckle yellow vein virus-[Japan:Fukui:2001] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2761 RA Ueda S.; RT ; RL Submitted (23-SEP-2005) to the INSDC. RL Contact:Shigenori Ueda National Agricultural Institute for Kyushu Okinawa RL Region; 1823 Mii, Kurume, Fukuoka 839-8503, Japan XX RN [2] RX DOI; 10.1007/s00705-007-0011-8. RX PUBMED; 18175045. RA Ueda S., Onuki M., Hanada K., Takanami Y.; RT "Unique grouping of the Far East Asian begomovirus complex based on RT sequence analyses of the DNA-A genome and associated DNAbeta satellite RT molecules isolated from tomato, honeysuckle and Eupatorium plants in RT Japan"; RL Arch. Virol. 153(3):417-426(2008). XX DR MD5; 58865c215d579ce4d6283ac6ad329506. XX FH Key Location/Qualifiers FH FT source 1..2761 FT /organism="Honeysuckle yellow vein FT virus-[Japan:Fukui:2001]" FT /isolate="Fukui" FT /mol_type="genomic DNA" FT /country="Japan:Fukui" FT /isolation_source="tomato" FT /collection_date="2001" FT /note="originally submitted as 'Tobacco leaf curl Japan FT virus-[Fukui]'" FT /db_xref="taxon:434023" FT CDS 136..486 FT /codon_start=1 FT /transl_table=1 FT /gene="V2" FT /product="V2" FT /db_xref="GOA:A4F1U5" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:A4F1U5" FT /protein_id="BAF49362.1" FT /translation="MWIPLVNDFPETVHGFRCMLAVKYLLLVESTYAPDTVGYDLVRDL FT IGVVRAKNYVEASCRYRNFHTRLQGTATSELRQPVCQPCECPHCPRHKQKEIMGSAAHV FT SEAQDVQNVQKS" FT CDS 296..1069 FT /codon_start=1 FT /transl_table=1 FT /gene="V1" FT /product="coat protein" FT /db_xref="GOA:A4F1U6" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:A4F1U6" FT /protein_id="BAF49363.1" FT /translation="MSKRPADIGIFTPVSKVRRRLNFDSPYANRASAPIALVTNKRRSW FT AQRPMYRKPRMYRMYRSPDVPKGCEGPCKVQSFEKKNDVGHSGTLICVSDITRGNGLTH FT RVGKRFCIKSVYIIGKFWMDENIKTKNHTNNVLFWLVRDRRPGSTPYGFQEAFNMFEYE FT PSTATVKQELRDRLQVLHRFSATVTGGQYASKEQAVIKRFWKLNHHVTYNHQEQAKYEN FT HTENALLLYMACTHASNPVYATLKIRVYFYDSVQN" FT CDS complement(1066..1470) FT /codon_start=1 FT /transl_table=1 FT /gene="C3" FT /product="C3" FT /db_xref="GOA:A4F1U7" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:A4F1U7" FT /protein_id="BAF49364.1" FT /translation="MDSRTGDTITAAQARNGAYTWTVPNPLYFKLTTHAQRQFNMDQDI FT ITLQIQFNHNLRNQLDIHKCFLSFKIWTRLHPQTLHFLRVFRTQVLKYLDNLGVISINN FT VIRAVDHVLYNVFEGTEYVQQFTDIKFKLY" FT CDS complement(1211..1618) FT /codon_start=1 FT /transl_table=1 FT /gene="C2" FT /product="C2" FT /db_xref="GOA:A4F1U8" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:A4F1U8" FT /protein_id="BAF49365.1" FT /translation="MQPSSPSTAHSTQVPIKVRHRSEKRRAPRRRRIDLNCGCSIYVAL FT GCANHGFTHRGHHHCSSGKEWRVYLDSAQSPIFQTHDTRATAIQHGSGYNNFTDTIQPQ FT PQESTGHTQVLPLFQDLDSLTSSDFAFLEGI" FT CDS complement(1518..2696) FT /codon_start=1 FT /transl_table=1 FT /gene="Rep" FT /product="replication-associated protein" FT /db_xref="GOA:A4F1U9" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:A4F1U9" FT /protein_id="BAF49366.1" FT /translation="MPCPPEYKLPPNAPPFSRSLKCPPIDQVNMPRAGRFSLKAKNYFL FT TYPQCSIDKEEALTQLQKLNTPTNIKFIRICRELHQDGSPHLHVLIQFEGKYNCTNQRF FT FDLVSPNRSAHFHPNIQAAKSSSDVKTYMEKDGDIVDFGVFQVDGRSARGGCQSANDAY FT AEAINSGSKSSALCILREKAPKDFVLQFHNLNSNLDRIFAPPLEEFVSPFLSSSFDQVP FT EQLEEWAAENVRDYAARPWRPISIVIEGDSRTGKTMWARSLSPRHNYLCGHLDLSPKVY FT SNEAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPTSS FT YTEYLDEDKNAALKAWAIKNATFVTLYGPLYSGTHQGATQIREEESTSPEED" FT CDS complement(2159..2452) FT /codon_start=1 FT /transl_table=1 FT /gene="C4" FT /product="C4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:A4F1V0" FT /protein_id="BAF49367.1" FT /translation="MGALISMSSSSSRGNTTAQINDSSTSYPQTGQHISIQTFRRLKAR FT QMSRPIWRKTETSLILECSRSMEDQLEEVASLPTTRMPRQSTQDLSHRHSVY" XX SQ Sequence 2761 BP; 720 A; 557 C; 648 G; 836 T; 0 other; accggatggc cgcccgaaat ttcgtggtgg tccccccttg tcggccaatg aataacgtgc 60 cttgaatgtt aaataaatgg aaagtgacgt tgcttttgtc tttaaatacg tcagccctaa 120 ttttaacggt gtaagatgtg gatcccttta gttaacgatt tccctgaaac cgttcacggt 180 tttaggtgta tgttagcggt taaatacctc ctacttgttg aatctacgta tgctccagat 240 actgtagggt acgatcttgt acgcgatctt attggagttg ttcgagctaa gaactatgtc 300 gaagcgtcct gcagatatag gaattttcac acccgtctcc aaggtacggc gacgtctgaa 360 cttcgacagc ccgtatgcca accgtgcgag tgcccccatt gccctcgtca caaacaaaag 420 gagatcatgg gctcagcggc ccatgtatcg gaagcccagg atgtacagaa tgtacagaag 480 tcctgatgtt cccaaggggt gtgaaggtcc gtgtaaggta cagtcatttg agaagaagaa 540 tgatgttggg cattctggta ctctgatctg tgtttctgat atcactcgtg gtaatggact 600 tactcatcgt gttgggaaga gattttgtat aaaatctgtt tatattattg gtaaattctg 660 gatggacgag aatattaaga cgaagaatca cactaacaac gtgttattct ggttagttag 720 ggatagacgt cctggttcaa ctccttatgg attccaagag gcattcaata tgtttgaata 780 tgaacccagt acagccactg ttaaacagga gttgagagat cgtttgcagg tgttacatag 840 gttcagtgcg actgttacag gtggacaata tgcgtccaag gaacaagctg tcatcaagag 900 gttctggaag ttgaatcatc atgtcactta caatcatcag gagcaagcta aatatgagaa 960 ccatactgaa aatgctttgt tattgtatat ggcgtgtact catgccagta atccagtgta 1020 tgccacatta aaaatcagag tgtatttcta cgattcagta caaaattaat aaagcttaaa 1080 ttttatatct gtaaattgtt gtacatattc agttccttcg aatacattat acaatacatg 1140 atctactgct ctaattacat tgttaattga aattacaccc aaattatcta agtacttcaa 1200 cacttgtgtc ctaaataccc tcaagaaatg caaagtctga ggatgtaagc gagtccaaat 1260 cttgaaagag aggaagcact tgtgtatgtc cagttgattc ctgaggttgt ggttgaattg 1320 tatctgtaaa gttattatat cctgatccat gttgaattgc cgttgcgcgt gtgtcgtgag 1380 tttgaaatat aggggattgg gcactgtcca ggtatacgcg ccattccttg cctgagctgc 1440 agtgatggtg tcccctgtgc gtgaatccat gatttgcaca ccccaatgcg acgtaaatag 1500 aacacccgca gttcagatca atcctcctcc ggcgaggtgc tctcctcttc tctgatctgt 1560 gtcgcacctt gatgggtacc tgagtagagt gggccgtaga gggtgacgaa ggttgcattt 1620 tttattgccc aggcttttag ggcagcattc ttgtcctcgt ctaaatactc agtgtatgat 1680 gacgttgggc ctggattgca gaggaagatt gttgggatac cacctttaat ttgaattggt 1740 ttcccgtact tggtgttgct ttgccagtcc ctttgggccc ccatgaactc tttaaagtgc 1800 tttagatagt ggggatccac gtcatcaatg acgttgtacc aggcctcatt gctgtaaacc 1860 ttggggctta agtcaagatg gccgcaaagg tagttatgac gtggactcag agacctggcc 1920 cacatggtct tccctgtcct gctatcccct tctatcacaa tgctaatggg cctccatggc 1980 cgcgcagcgt aatccctgac gttctcggca gcccattcct caagttgctc tggaacttga 2040 tcaaatgaag aagataaaaa aggagaaaca aattcctcca acggaggagc aaaaatccta 2100 tctaaattgc tatttaaatt atgaaattgt aaaacaaaat ctttgggagc tttctccctt 2160 aatatacaga gtgccgatga cttagatcct gagttgattg cctcggcata cgcgtcgttg 2220 gcagactggc aacctcctct agctgatctt ccatcgacct ggaacactcc aaaatcaacg 2280 atgtctccgt ctttctccat ataggtcttg acatctgacg agcttttagc cgcctgaatg 2340 tttggatgga aatgtgctga cctgtttggg gatacgaggt cgaagaatcg ttgatttgtg 2400 cagttgtatt tcccctcgaa ctggatgagg acatggagat gagggctccc atcttgatgt 2460 agctctctgc agatccttat gaatttaatg ttagttggtg tgtttaattt ttgtaattgg 2520 gttagggctt cttctttgtc gatggagcat tgtgggtatg tgaggaaata atttttggct 2580 tttaaagaaa aacgcccagc tctaggcatg ttgacttggt caattggggg gcacttcaaa 2640 ctcctgctga atgggggggc attggggggc aatttatatt ctggggggca tggcattatt 2700 gtaattactt taattttaaa ttcaaaattc aaattggtaa agcggccatc cgtataatat 2760 t 2761 //