ID   AB233163; SV 1; linear; genomic RNA; STD; VRL; 1527 BP.
XX
AC   AB233163;
XX
DT   17-NOV-2006 (Rel. 89, Created)
DT   23-MAY-2007 (Rel. 91, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein (CI, 6K2, NIa-VPg, NIa-Pro
DE   protein), partial cds, isolate: ND264J.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1527
RA   Ohshima K.;
RT   ;
RL   Submitted (30-AUG-2005) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1111/j.1365-294X.2006.03094.x.
RX   PUBMED; 17107475.
RA   Tomitaka Y., Ohshima K.;
RT   "A phylogeographical study of the Turnip mosaic virus population in East
RT   Asia reveals an 'emergent' lineage in Japan";
RL   Mol. Ecol. 15(14):4437-4457(2006).
XX
DR   MD5; 9a60c4f0a131daef837ad35e5c3e34db.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1527
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="ND264J"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..>1527
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:A0P8N7"
FT                   /db_xref="InterPro:IPR001730"
FT                   /db_xref="InterPro:IPR009003"
FT                   /db_xref="UniProtKB/TrEMBL:A0P8N7"
FT                   /protein_id="BAF36933.1"
FT                   /translation="TDGISRHFMSEYGALEAVHHQNASDMSKFLKLKGRWNKTLITRDV
FT                   LVLCGVLGGGLWMVIQHLRSKISEPVTHEAKGKRQRQKLKFRSVRDNKMGREVYGDDDT
FT                   IEHFFGDAYTKKGKSKGRTRGLGHKNRKFINMYGFDPEDFSAVRFVDPLTGATLDDNPF
FT                   TDIALVQEHFGNIRMDLLGEDELDSNEVRMNKTIQAYYMNNKTGKALKVDLTPHIPLKV
FT                   CDLHATIAGFPERENELRQTGKAQPINIDEVPRANNELVPVDHESNSMFRGLRDYNPIS
FT                   NNICHLTNVSDGASNSLYGVGFGPLILTNRHLFERNNGELIIKSRHGEFVIKNTTQLHL
FT                   LPIPDRDLLLIRLPKDVPPFPQKLGFRQPEKGERICMVGSNFQTKSITSIVSETSTIMP
FT                   VENSQFWKHWISTKDGQCGSPMVSTKDGKILGLHSLANFQNSINYFAAFPDDFAEKYLH
FT                   TIEAHEWVKHWKYNTSAISWGSLNIQASQPSGLFKVSKLISDLDSTAVYAQ"
FT   mat_peptide     <1..63
FT                   /gene="CI"
FT                   /product="CI protein"
FT   mat_peptide     64..222
FT                   /gene="6K2"
FT                   /product="6K2 protein"
FT   mat_peptide     223..798
FT                   /gene="NIa-VPg"
FT                   /product="NIa-VPg protein"
FT   mat_peptide     799..>1527
FT                   /gene="NIa-Pro"
FT                   /product="NIa-Pro protein"
XX
SQ   Sequence 1527 BP; 485 A; 341 C; 366 G; 335 T; 0 other;
     accgatggga tatctcggca tttcatgagt gagtatggag ctcttgaggc agttcaccat        60
     caaaacgcca gcgacatgag caaattcctc aagcttaagg gcagatggaa caaaacgcta       120
     atcacgcgag atgtgttggt gctttgtgga gttcttggag gtggattgtg gatggttatt       180
     cagcacctgc ggtcaaagat ttccgaaccc gtaacccacg aagcgaaagg taagaggcaa       240
     aggcagaaac taaagtttcg cagtgtccga gacaacaaga tgggcagaga ggtgtacgga       300
     gacgatgata ccatagaaca tttcttcggt gatgcctaca caaagaaagg gaagagcaag       360
     ggtaggacac gtggtctcgg acacaagaat agaaagttca tcaacatgta tgggtttgac       420
     cctgaagatt tctccgcagt tcgtttcgtg gatccactca caggagctac gttggacgac       480
     aacccgttca cagacatcgc ccttgtgcaa gagcactttg gtaacataag aatggactta       540
     ctcggggagg atgagctgga ctcaaatgag gtacgcatga ataagacaat ccaggcctac       600
     tacatgaaca ataaaacagg caaggctttg aaggtggatc tgacaccaca catacctctc       660
     aaggtgtgtg atcttcatgc aaccattgct ggattcccag agcgagaaaa cgaactgagg       720
     cagactggaa aagctcagcc cataaacata gacgaagtgc caagagcaaa taatgaactc       780
     gtcccagtgg accacgagag taactccatg ttcagagggt tgcgtgacta caacccaata       840
     tcaaacaaca tttgtcatct cacaaatgtt tcagatgggg catcaaactc gttatatgga       900
     gtcggtttcg gaccactcat attaacgaac cgacacctct ttgagcggaa taacggtgaa       960
     ctcataataa aatcacgaca tggtgagttc gtgattaaaa acacaactca gctacatttg      1020
     ctgccgattc cagacagaga tcttctgcta atccggttac caaaggacgt cccacccttc      1080
     ccacagaaat tgggttttag gcaacctgag aaaggtgaac gaatttgcat ggtggggtcc      1140
     aatttccaaa ccaagagcat aacgagtata gtctctgaga ctagcacaat aatgccagtg      1200
     gaaaacagtc agttttggaa acactggatc agcacgaaag atggccaatg cggaagtcca      1260
     atggtgagca cgaaagacgg gaaaatactt ggattacaca gcctagcaaa cttccagaac      1320
     tccatcaatt actttgctgc ttttccagat gattttgccg agaagtatct acataccatt      1380
     gaagcacacg agtgggtcaa gcattggaaa tacaacacta gtgccatcag ttggggctct      1440
     ttgaatatac aagcatcgca accgtcaggc ttgttcaaag taagcaagct aatctcagac      1500
     ctcgacagca cggcagtcta cgcacaa                                          1527
//