ID   AB233117; SV 1; linear; genomic RNA; STD; VRL; 1086 BP.
XX
AC   AB233117;
XX
DT   17-NOV-2006 (Rel. 89, Created)
DT   23-MAY-2007 (Rel. 91, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein (P1 protein), partial cds,
DE   isolate: OB995J.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (30-AUG-2005) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1111/j.1365-294X.2006.03094.x.
RX   PUBMED; 17107475.
RA   Tomitaka Y., Ohshima K.;
RT   "A phylogeographical study of the Turnip mosaic virus population in East
RT   Asia reveals an 'emergent' lineage in Japan";
RL   Mol. Ecol. 15(14):4437-4457(2006).
XX
DR   MD5; 0f20889330ff30b1b5bc731349af3e1e.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1086
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="OB995J"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             1..>1086
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:A0P8J1"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:A0P8J1"
FT                   /protein_id="BAF36887.1"
FT                   /translation="MAAVTFASAITNAITNKPALTGMVQFGSFPPMPLRSTTVTTVVTS
FT                   VAQPKLYTMQFGSLDPVVVKSGAGSFAKATRQQPNAEIDVSLSEAAALEVAKPRSNAVL
FT                   RMHEEANKERALFLDWEASLKRSSYGIAENEKVVMTTRGVSKIVPRSSRAMKQKRARER
FT                   RRAQQPIILKWEPKLSGISIGGGLSASAIEAEEVRTKWPLHKTPSMKKRTVHRMCRMND
FT                   QGVDMLTRSLIKIFKTKSASIEYIGKKSIKVDFIRKERTKFARIQVAHLLGKRAQRDLS
FT                   TGMQENHFIDISSGYSGNKTTINPGVVCAGWSGIVVRNGILTQKRSRSPSEAFVIRGEH
FT                   EGKLYDARVKVTRTMSHKIVHF"
FT   mat_peptide     1..>1086
FT                   /gene="P1"
FT                   /product="P1 protein"
XX
SQ   Sequence 1086 BP; 351 A; 235 C; 286 G; 214 T; 0 other;
     atggcagcag ttacattcgc atcagctatc accaacgcca tcaccaacaa accagcactc        60
     accggaatgg tacagtttgg gagtttccca ccaatgccat tgcgatccac caccgtcacc       120
     acagtcgtca cttcagtggc gcaacctaaa ctgtacacaa tgcagtttgg aagccttgac       180
     ccagtagttg tcaagagtgg agcagggtcc tttgctaagg caacacgcca gcagcctaac       240
     gctgaaatag acgttagcct cagtgaagcc gcagctctgg aggttgcgaa acctagatca       300
     aatgccgtgt tgaggatgca cgaggaagca aacaaggaga gagcactctt tttggactgg       360
     gaagctagtt tgaagagaag ctcgtatgga attgctgaga acgaaaaagt tgtaatgaca       420
     actcgtggcg tcagtaagat agtgcccagg agttcaaggg caatgaagca aaagcgcgca       480
     agggagaggc gtagagcaca gcaaccaatt atactaaagt gggagcccaa attgagcggg       540
     atctcaatcg gaggagggct ctctgcgagc gcgatcgaag cagaagaggt tcgcacaaag       600
     tggccgcttc ataagacacc gtcaatgaag aagaggacgg tgcacagaat gtgcaggatg       660
     aacgaccaag gagttgacat gttgacacga tccctgatta agattttcaa aactaagagt       720
     gccagcattg agtacatcgg aaagaagtcg attaaggtcg atttcatcag aaaagaacgg       780
     acgaaattcg caagaattca agtagcacac ttactcggga agagagcaca gcgcgactta       840
     tcaactggaa tgcaagaaaa ccattttatt gacatctcca gtgggtactc aggtaacaaa       900
     acaaccataa atccaggagt agtttgcgca ggttggagtg gcatagttgt tagaaatgga       960
     attctaaccc agaaacgaag cagaagtcca tcagaggcct ttgtaatcag aggtgagcac      1020
     gaaggcaagt tgtacgatgc cagagtcaaa gtcacgagga caatgagtca caagattgtg      1080
     cacttt                                                                 1086
//