ID   AB233115; SV 1; linear; genomic RNA; STD; VRL; 1086 BP.
XX
AC   AB233115;
XX
DT   17-NOV-2006 (Rel. 89, Created)
DT   23-MAY-2007 (Rel. 91, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein (P1 protein), partial cds,
DE   isolate: ND264J.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (30-AUG-2005) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1111/j.1365-294X.2006.03094.x.
RX   PUBMED; 17107475.
RA   Tomitaka Y., Ohshima K.;
RT   "A phylogeographical study of the Turnip mosaic virus population in East
RT   Asia reveals an 'emergent' lineage in Japan";
RL   Mol. Ecol. 15(14):4437-4457(2006).
XX
DR   MD5; d2be9883b8710bb4ea358e7c14464ed7.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1086
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="ND264J"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             1..>1086
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:A0P8I9"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:A0P8I9"
FT                   /protein_id="BAF36885.1"
FT                   /translation="MAAVTFASAITNAITDRPALTGMVQFGNFPPMPLRSATATTVATS
FT                   VAQPKLYTVQFGSLDPVVIKSGAGSFAKATRQQPNVEIDVSLSEAAALEVAKPRSNAVL
FT                   RMHEEANKERALFLDWETSLKRSSYGIAENEKVVITTRGVSKIVPRSSRAMKQKRARER
FT                   RRAQQPIILKWEPKLSEISIGGGLSASAIEAEEVRTKRPLHKTPSMKKRTVHRICRMND
FT                   QGVDMLTRSLVKIFKTKSANIEYIGKKSIKVDFIRKERTKFARIQVAHLLGKRAQRDLS
FT                   TGMEENHFIDISSGYSGNKTTINPGVVCAGWSGIVVRDGILTQKRSRSPSKAFVIRGEH
FT                   EGKLYDARVKITRTMSHKIVHF"
FT   mat_peptide     1..>1086
FT                   /gene="P1"
FT                   /product="P1 protein"
XX
SQ   Sequence 1086 BP; 351 A; 241 C; 287 G; 207 T; 0 other;
     atggcagcag ttacattcgc atcagctatc accaacgcca tcaccgatag accagcactc        60
     accggaatgg tacagtttgg gaatttccca ccaatgccat tgcgatccgc caccgccacc       120
     acagtcgcca cttcagtggc gcaacctaaa ctgtacacag tgcagtttgg aagccttgac       180
     ccagtagtca tcaagagtgg agcagggtcc tttgctaagg caacacgcca gcagcctaac       240
     gttgaaatag acgttagcct cagtgaagcc gcagctctgg aggttgcgaa acctagatcg       300
     aatgccgtgt tgaggatgca cgaggaagca aacaaggaga gagcactctt tttggactgg       360
     gaaactagtt tgaagagaag ctcgtatgga attgctgaga acgagaaagt tgtaataaca       420
     actcgtggcg tcagcaagat agtgcccaga agctcaaggg caatgaagca aaagcgcgca       480
     agggagaggc gtagagcgca gcaaccaatt atactaaagt gggagcccaa attgagcgag       540
     atctcaatcg gaggagggct ctctgcgagc gcgatcgaag cagaagaggt tcgcacaaag       600
     cggccacttc ataagacacc gtcaatgaag aagaggacgg tgcacagaat atgcaggatg       660
     aacgaccaag gagttgacat gttgacacga tccctggtta agattttcaa aaccaagagt       720
     gctaacattg agtacatcgg gaagaagtcg attaaggtcg atttcatcag aaaagaacgg       780
     acgaaattcg caagaattca agtagcacac ttactcggga agagagcaca gcgcgactta       840
     tcaactggaa tggaggaaaa ccatttcatt gacatctcca gcgggtactc aggtaacaaa       900
     acaaccataa atccaggagt agtctgcgca ggttggagtg gcatagtcgt tagagatgga       960
     attctaaccc agaaacgaag cagaagtcca tcaaaggcct ttgtaattag aggtgagcac      1020
     gaaggcaagt tgtacgatgc cagagttaaa atcacgagga caatgagcca caagattgtg      1080
     cacttt                                                                 1086
//