ID   AB233114; SV 1; linear; genomic RNA; STD; VRL; 1086 BP.
XX
AC   AB233114;
XX
DT   17-NOV-2006 (Rel. 89, Created)
DT   23-MAY-2007 (Rel. 91, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein (P1 protein), partial cds,
DE   isolate: ND258J.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (30-AUG-2005) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1111/j.1365-294X.2006.03094.x.
RX   PUBMED; 17107475.
RA   Tomitaka Y., Ohshima K.;
RT   "A phylogeographical study of the Turnip mosaic virus population in East
RT   Asia reveals an 'emergent' lineage in Japan";
RL   Mol. Ecol. 15(14):4437-4457(2006).
XX
DR   MD5; 897f667f628c9962dc6c4c4959e26c20.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1086
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="ND258J"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             1..>1086
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:A0P8I8"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:A0P8I8"
FT                   /protein_id="BAF36884.1"
FT                   /translation="MAAVTFATAITNTTASRSALTGMVQFGNFPPVPLRSTTATTVVTS
FT                   VAQPKLYTVQFGSLDPVVVKSGAGSFAKATRQQPNVEIDVSLSEAAALEVAKPRPNAVL
FT                   RMHEEANKERALFLDWEASLKRSSYGIAENEKVVMTTRGVSNIVPRSSRAMKQKRARER
FT                   RRVQQPIILKWEPKSSGISIGGGLSASATEVEEVRTKWPLHKTPSMKRKMVHRRCKMND
FT                   QGIDMLMRSLIKIFKAKSANIEFTRRKSIKVDFVKKEQTKFARVQVVHLLGKRAQRDLS
FT                   TGAEENHFIDTLSTYSGNKKIINPGVVCAGWSGIVIRNGILTQKQSRSPSQAFVIRGEH
FT                   EGKLYDARVKVTKVMSHKIIHY"
FT   mat_peptide     1..>1086
FT                   /gene="P1"
FT                   /product="P1 protein"
XX
SQ   Sequence 1086 BP; 343 A; 224 C; 297 G; 222 T; 0 other;
     atggcagcag ttacatttgc aaccgcaatc actaacacta ccgcaagcag atcagcactc        60
     accggaatgg tacagtttgg gaacttccca ccagtgccat tgcgatccac caccgccacc       120
     acagtcgtca cttcagtggc gcagcctaaa ctgtacacag tgcagtttgg aagccttgac       180
     ccagtagtcg tcaagagtgg agcagggtcc tttgctaagg caacacgcca gcagcctaac       240
     gttgagatag acgttagcct cagtgaagcc gcagctctgg aggttgcgaa acctagaccg       300
     aatgccgtgt tgaggatgca cgaggaagca aacaaggaga gagcactctt tttggactgg       360
     gaggccagtt tgaagagaag ctcgtatgga attgctgaga acgagaaagt tgtaatgaca       420
     actcgtggcg tcagcaatat agtgcccaga agttcaaggg caatgaagca aaagcgcgca       480
     agggagaggc gtagagtgca gcaaccaatt atattaaagt gggagcccaa atcgagcgga       540
     atctcaatcg gaggagggct ttctgcgagc gcgactgaag tagaagaagt tcgcacaaag       600
     tggccgttgc ataaaacacc atcaatgaag aggaagatgg tgcacagaag atgcaagatg       660
     aatgatcaag gaattgacat gttaatgcgt tctttgatta aaatctttaa ggcgaagagt       720
     gcgaacattg agtttactag gaggaagtcc attaaagtgg attttgtaaa gaaagagcaa       780
     acgaagtttg ccagagtgca agtagtgcat ttgctcggaa agcgggcaca acgagacctg       840
     tcgactggtg cagaagaaaa ccacttcatt gacaccttaa gcacctactc aggaaataag       900
     aagatcataa acccaggagt ggtgtgcgct ggttggagcg gcattgttat cagaaacggc       960
     attttgactc agaagcagag cagaagtcct tcgcaagcct ttgtgattcg aggagaacat      1020
     gaagggaagt tgtatgacgc cagagttaag gtcacaaagg tgatgagcca taaaatcata      1080
     cactat                                                                 1086
//